Gene Details:

• Gene ID: AT2G31380
• Gene Symbol: BBX25, STH
• Gene Name: B-box domain protein 25, salt tolerance homologue
• Description: salt tolerance homologue;(source:Araport11)
• TAIR Accession: locus:2061330
• Genome: Araport11_genome_release
• Species: Arabidopsis thaliana

Transcripts:

• AT2G31380.1

Plant Ontology Annotations:

• PO:0000037  — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
• PO:0008019  — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
• PO:0009006  — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
• PO:0009009  — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
• PO:0009025  — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
• PO:0009029  — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
• PO:0009031  — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
• PO:0009046  — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
• PO:0009052  — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
• PO:0020030  — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
• PO:0020038  — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
• PO:0020100  — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
• PO:0020137  — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
• PO:0025022  — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
• PO:0025281  — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)

Gene Ontology:

• GO:0006355  — acts upstream of or within — regulation of DNA-templated transcription
• GO:0008270  — enables — zinc ion binding
• GO:0010100  — involved in — negative regulation of photomorphogenesis
• GO:0005515  — enables — protein binding
• GO:0009640  — involved in — photomorphogenesis
• GO:0006355  — involved in — regulation of DNA-templated transcription
• GO:0005634  — is active in — nucleus
• GO:0003700  — enables — DNA-binding transcription factor activity
• GO:0005634  — located in — nucleus
• GO:0019904  — enables — protein domain specific binding

Function-related keywords:

• shoot axis apex ,  leaf lamina base ,  shoot system ,  plant embryo ,  vascular leaf ,  stamen ,  sepal ,  flower ,  inflorescence flower pedicel ,  cotyledon ,  petiole ,  hypocotyl ,  leaf apex ,  collective leaf structure ,  pollen

Literature:

• Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes.   DOI:  10.1126/science.290.5499.2105 ;  PMID:  11118137
• Transcriptome changes for Arabidopsis in response to salt, osmotic, and cold stress.   DOI:  10.1104/pp.008532 ;  PMID:  12481097
• The FHY3 and FAR1 genes encode transposase-related proteins involved in regulation of gene expression by the phytochrome A-signaling pathway.   DOI:  10.1046/j.1365-313x.2003.01741.x ;  PMID:  12753585
• Cross-species microarray transcript profiling reveals high constitutive expression of metal homeostasis genes in shoots of the zinc hyperaccumulator Arabidopsis halleri.   DOI:  10.1046/j.1365-313x.2003.01959.x ;  PMID:  14690509
• Expression profiling of phyB mutant demonstrates substantial contribution of other phytochromes to red-light-regulated gene expression during seedling de-etiolation.   DOI:  10.1111/j.1365-313X.2004.02084.x ;  PMID:  15144375
• Gibberellin mobilizes distinct DELLA-dependent transcriptomes to regulate seed germination and floral development in Arabidopsis.   DOI:  10.1104/pp.106.082289 ;  PMID:  16920880
• Functional profiling reveals that only a small number of phytochrome-regulated early-response genes in Arabidopsis are necessary for optimal deetiolation.   DOI:  10.1105/tpc.106.042200 ;  PMID:  16891401
• SALT TOLERANCE HOMOLOG2, a B-box protein in Arabidopsis that activates transcription and positively regulates light-mediated development.   DOI:  10.1105/tpc.107.054791 ;  PMID:  17965270
• The common function of a novel subfamily of B-Box zinc finger proteins with reference to circadian-associated events in Arabidopsis thaliana.   DOI:  10.1271/bbb.80041 ;  PMID:  18540109
• The Arabidopsis B-box zinc finger family.   DOI:  10.1105/tpc.109.069088 ;  PMID:  19920209
• Light-responsive double B-box containing transcription factors are conserved in Physcomitrella patens.   DOI:  10.1271/bbb.110359 ;  PMID:  21979077
• The Arabidopsis B-BOX protein BBX25 interacts with HY5, negatively regulating BBX22 expression to suppress seedling photomorphogenesis.   DOI:  10.1105/tpc.113.109751 ;  PMID:  23624715
• Molecular interactions of BBX24 and BBX25 with HYH, HY5 HOMOLOG, to modulate Arabidopsis seedling development.   DOI:  10.4161/psb.25208 ;  PMID:  23733077
• Transcriptional dynamics of two seed compartments with opposing roles in Arabidopsis seed germination.   DOI:  10.1104/pp.113.223511 ;  PMID:  23858430
• Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.   DOI:  10.1186/1471-2229-13-229 ;  PMID:  24377444
• Light signaling differentially regulates the expression of group IV of the B-box zinc finger family.   DOI:  10.1080/15592324.2017.1365213 ;  PMID:  28922622
• Bioinformatics analysis of BBX family genes and its response to UV-B in Arabidopsis thaliana.   DOI:  10.1080/15592324.2020.1782647 ;  PMID:  32552524
• Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes.   DOI:  10.1126/science.290.5499.2105 ;  PMID:  11118137

Sequences: