Gene Details:
- Gene ID: AT2G31270
- Gene Symbol: ATCDT1A, CDT1, CDT1A
- Gene Name: ARABIDOPSIS HOMOLOG OF YEAST CDT1 A, ARABIDOPSIS HOMOLOG OF YEAST CDT1, homolog of yeast CDT1 A
- Description: CDT1-like protein A;(source:Araport11)
- TAIR Accession: locus:2042541
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- PO:0009030 — carpel — carpelo (Spanish, exact), 心皮 (Japanese, exact), Poaceae carpel (narrow), Zea carpel (narrow), pistil (broad)
- PO:0009032 — petal — pétalo (Spanish, exact), 花弁 (Japanese, exact)
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
- PO:0025195 — pollen tube cell — célula del tubo polínico (Spanish, exact), 花粉管細胞 (Japanese, exact)
Gene Ontology:
- GO:0070182 — enables — DNA polymerase binding
- GO:0000076 — involved in — DNA replication checkpoint signaling
- GO:0005515 — enables — protein binding
- GO:0030174 — involved in — regulation of DNA-templated DNA replication initiation
- GO:0009507 — located in — chloroplast
- GO:0006260 — acts upstream of or within — DNA replication
- GO:0071163 — involved in — DNA replication preinitiation complex assembly
- GO:0005634 — located in — nucleus
- GO:0019901 — enables — protein kinase binding
- GO:0048229 — acts upstream of or within — gametophyte development
- GO:0003677 — enables — DNA binding
- GO:0004693 — enables — cyclin-dependent protein serine/threonine kinase activity
- GO:0009658 — acts upstream of or within — chloroplast organization
- GO:0005634 — is active in — nucleus
- GO:0000278 — involved in — mitotic cell cycle
- GO:0051276 — acts upstream of or within — chromosome organization
Function-related keywords:
- shoot axis apex , leaf lamina base , root , shoot system , plant embryo , vascular leaf , stamen , sepal , flower , inflorescence flower pedicel , cotyledon , petiole , hypocotyl , leaf apex , collective leaf structure , pollen , carpel , petal , plant sperm cell , pollen tube cell , pollen
Literature:
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- Genome based identification and analysis of the pre-replicative complex of Arabidopsis thaliana. DOI: 10.1016/j.febslet.2004.07.088 ; PMID: 15358564
- Cell and plastid division are coordinated through the prereplication factor AtCDT1. DOI: 10.1073/pnas.0502564102 ; PMID: 15928083
- ABAP1 is a novel plant Armadillo BTB protein involved in DNA replication and transcription. DOI: 10.1038/emboj.2008.191 ; PMID: 18818695
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- GEM, a Novel Factor in the Coordination of Cell Division to Cell Fate Decisions in the Arabidopsis Epidermis. DOI: 10.4161/psb.2.6.4579 ; PMID: 19704596
- Evidence for a role of Arabidopsis CDT1 proteins in gametophyte development and maintenance of genome integrity. DOI: 10.1105/tpc.112.100156 ; PMID: 22773747
- The MADS-box XAANTAL1 increases proliferation at the Arabidopsis root stem-cell niche and participates in transition to differentiation by regulating cell-cycle components. DOI: 10.1093/aob/mcw126 ; PMID: 27474508
- BICELLULAR POLLEN 1 is a modulator of DNA replication and pollen development in Arabidopsis. DOI: 10.1111/nph.15610 ; PMID: 30484867
- The Armadillo BTB Protein ABAP1 Is a Crucial Player in DNA Replication and Transcription of Nematode-Induced Galls. DOI: 10.3389/fpls.2021.636663 ; PMID: 33995437
- DNA replication licensing affects cell proliferation or endoreplication in a cell type-specific manner. DOI: 10.1105/tpc.104.022400 ; PMID: 15316110
- Analysis of the cDNAs of hypothetical genes on Arabidopsis chromosome 2 reveals numerous transcript variants. DOI: 10.1104/pp.105.063479 ; PMID: 16244158
- Mammalian DET1 regulates Cul4A activity and forms stable complexes with E2 ubiquitin-conjugating enzymes. DOI: 10.1128/MCB.02432-06 ; PMID: 17452440
Sequences:
cDNA Sequence
- >AT2G31270.1
GCAACGGGTTAATAGGCGCGGGAGGTATACGTGGCTTTGGTACACGTAGGATTGCGCGCCAAAGACCTAAATAAATCTAAACCCTTCTTCTTCTTCCGTCGTCTTCATCGTCTTCATCTATCTCCTCCACTATCTCCTCTCTGCATCTGACACTCTATAGACATTGTTGATAAAAATGAGTACACCAGGCTCTTCTAGATCCATTCCATTCAAATCGAAGAAACGATTGGTGATGGATTCGCCGTCTTCGAAATCTCAAACCGGGAATCCAAATCCGTCTTCTGTAGCATTGCCTACGCCGGAAAAACCACTTGAGAACATGCTTAGTAGATCGAGAAACCGATCTGTGGCTTTATCAGTGAAAGAAATTCGTCAAGCCGCTGGATCTCGTCGCAGATCTGAAGATCCGGTTGCTTCATCTGCCAAAAGCAGGCTCTTTTTCGATTCATCATCATCTTCTCCTTCAAAACGTAAAAGCTCTAACAAAAATGCAGAGAAAGAGAAACTTCCGGAGAAGTACGAGAATCTGGGAAAGTTCTTTGAAGCATTGGATAATTCGATGTTGTTATCGAAATTAAGAGGTTCTAAGCCAACATTCTCCAACATTTCTAAACAAATCGAGCATTTAACCGAGAGGAGGTTTTGTTATAGTCACTTGGCTCAAATAAAGCATATATTGCCTGAAGCGATTGAGATTAAGAGAGTATTGATACATGATGAAACTACTTGCTGTATGAAACCGGACCTTCATGTTACGCTCAATGCCGATGCTGTTGAATACAACGACAAGTCGAAATCGGAAAGTAAGAAAATCGCTCTTCGGAAAGTGTTTCGGGCTAGACTTGCGGATTTTGTTAAAGCTCACCCTCAGGGTGATGAAGTTCCAGAGGAACCGCTTCCTGAGCCCTTCAATAGAAGGAAACCAGTTGAAAACTCAAATGTTGAAGTCAAGCGTGTTAGTTCTCTCATGGAAGAGATGGCTTCTATTCCAGCATCTAAATTGTTTTCATCTCCCATCACATCAACGCCAGTCAAAACAACTTCAAGTCTGGCTAAACCAACTTCGTCTCAGATTAACATTGCTCCAACTCCAACCAAACCAACTTCAACTCCTGCTAAACAGACTTTGTCTGAGATTAATATATTGCCAACTCCAGTCAAACCAGTGTCAACTCTGGCTAAGTTTCCTTCAACACCGGCGATTATTGACTCAACACCAGTCATTACTGCAACTCCACCTGAATTTGCTTCAACTCCTGCCCGGCTGATGAGTACTTCTCTGGCAGCTCGTCCGCTGAAAAGAAGCAACGGTCATACAAATCCAGATGATATTTCTGCTGACCCACCGACTAAGCTCGTGAGGCGTTCCTTGTCTCTGAACTTTGATTCTTATCCTGAGGATGAGAGAACTATGGATTTCACAGATGATATACCCATTGATCAAGTACCAGAAGAAGATGTATCCAGCGATGATGAAATACTCAGCATACTTCCTGATAAACTTCGACATGCGATAAAAGAACAAGAGAGGAAAGCGATTGAGGATCAAAATCCAGCAATCTCTCTGGCAAAAAGAAGGCGAAAGATGATCGCTTGTCTACCTAAACTTTTCAATGTCATCCATTACTTAATTCAATCGATAAGGCGTTGGGTTATCACAAAAGAAGAGCTTGTGCACAAGATCATTGCCGGTCACTCTGATATTACTGACAGAAAGGAAGTTGAAGAACAACTAATCTTACTGCAAGAAATTGTCCCTGAATGGATGTCTGAGAAAAAATCATCAAGTGGAGATGTTCTAGTATGCATAAACAAGTTGGCATCTCCTCTAACAATCCGATCACGTCTTGAAGAAGAAAACAAGCAAGAGATGGCTCCACTGCTTTCTTGAGATCGTGGTTCCATCGGCTGCGGTTACTTTGGGTTCTAACTTATTTTTGGACTGCCAAATATGTTATAGTCTATTCATGAGACAGATGTGTAGAGACTACTAAGTTATAAAGTTCCTAAGTAAAGTAAAAGGGTGAAAACAAGTAGATGACAAACTATTTAGGAAGGTGTTTTCATCTTTTTCTGAATTATGACAATGAGGTTATTTCTCTATCAATAAAGAGTAATTTTATGCATTTTGTAACAGAATTCTTTATAGAACAAGACTATAAGGACCGTTGTTGTGTG
CDS Sequence
- >AT2G31270.1
ATGAGTACACCAGGCTCTTCTAGATCCATTCCATTCAAATCGAAGAAACGATTGGTGATGGATTCGCCGTCTTCGAAATCTCAAACCGGGAATCCAAATCCGTCTTCTGTAGCATTGCCTACGCCGGAAAAACCACTTGAGAACATGCTTAGTAGATCGAGAAACCGATCTGTGGCTTTATCAGTGAAAGAAATTCGTCAAGCCGCTGGATCTCGTCGCAGATCTGAAGATCCGGTTGCTTCATCTGCCAAAAGCAGGCTCTTTTTCGATTCATCATCATCTTCTCCTTCAAAACGTAAAAGCTCTAACAAAAATGCAGAGAAAGAGAAACTTCCGGAGAAGTACGAGAATCTGGGAAAGTTCTTTGAAGCATTGGATAATTCGATGTTGTTATCGAAATTAAGAGGTTCTAAGCCAACATTCTCCAACATTTCTAAACAAATCGAGCATTTAACCGAGAGGAGGTTTTGTTATAGTCACTTGGCTCAAATAAAGCATATATTGCCTGAAGCGATTGAGATTAAGAGAGTATTGATACATGATGAAACTACTTGCTGTATGAAACCGGACCTTCATGTTACGCTCAATGCCGATGCTGTTGAATACAACGACAAGTCGAAATCGGAAAGTAAGAAAATCGCTCTTCGGAAAGTGTTTCGGGCTAGACTTGCGGATTTTGTTAAAGCTCACCCTCAGGGTGATGAAGTTCCAGAGGAACCGCTTCCTGAGCCCTTCAATAGAAGGAAACCAGTTGAAAACTCAAATGTTGAAGTCAAGCGTGTTAGTTCTCTCATGGAAGAGATGGCTTCTATTCCAGCATCTAAATTGTTTTCATCTCCCATCACATCAACGCCAGTCAAAACAACTTCAAGTCTGGCTAAACCAACTTCGTCTCAGATTAACATTGCTCCAACTCCAACCAAACCAACTTCAACTCCTGCTAAACAGACTTTGTCTGAGATTAATATATTGCCAACTCCAGTCAAACCAGTGTCAACTCTGGCTAAGTTTCCTTCAACACCGGCGATTATTGACTCAACACCAGTCATTACTGCAACTCCACCTGAATTTGCTTCAACTCCTGCCCGGCTGATGAGTACTTCTCTGGCAGCTCGTCCGCTGAAAAGAAGCAACGGTCATACAAATCCAGATGATATTTCTGCTGACCCACCGACTAAGCTCGTGAGGCGTTCCTTGTCTCTGAACTTTGATTCTTATCCTGAGGATGAGAGAACTATGGATTTCACAGATGATATACCCATTGATCAAGTACCAGAAGAAGATGTATCCAGCGATGATGAAATACTCAGCATACTTCCTGATAAACTTCGACATGCGATAAAAGAACAAGAGAGGAAAGCGATTGAGGATCAAAATCCAGCAATCTCTCTGGCAAAAAGAAGGCGAAAGATGATCGCTTGTCTACCTAAACTTTTCAATGTCATCCATTACTTAATTCAATCGATAAGGCGTTGGGTTATCACAAAAGAAGAGCTTGTGCACAAGATCATTGCCGGTCACTCTGATATTACTGACAGAAAGGAAGTTGAAGAACAACTAATCTTACTGCAAGAAATTGTCCCTGAATGGATGTCTGAGAAAAAATCATCAAGTGGAGATGTTCTAGTATGCATAAACAAGTTGGCATCTCCTCTAACAATCCGATCACGTCTTGAAGAAGAAAACAAGCAAGAGATGGCTCCACTGCTTTCTTGA
Protein Sequence
- >AT2G31270.1
MSTPGSSRSIPFKSKKRLVMDSPSSKSQTGNPNPSSVALPTPEKPLENMLSRSRNRSVALSVKEIRQAAGSRRRSEDPVASSAKSRLFFDSSSSSPSKRKSSNKNAEKEKLPEKYENLGKFFEALDNSMLLSKLRGSKPTFSNISKQIEHLTERRFCYSHLAQIKHILPEAIEIKRVLIHDETTCCMKPDLHVTLNADAVEYNDKSKSESKKIALRKVFRARLADFVKAHPQGDEVPEEPLPEPFNRRKPVENSNVEVKRVSSLMEEMASIPASKLFSSPITSTPVKTTSSLAKPTSSQINIAPTPTKPTSTPAKQTLSEINILPTPVKPVSTLAKFPSTPAIIDSTPVITATPPEFASTPARLMSTSLAARPLKRSNGHTNPDDISADPPTKLVRRSLSLNFDSYPEDERTMDFTDDIPIDQVPEEDVSSDDEILSILPDKLRHAIKEQERKAIEDQNPAISLAKRRRKMIACLPKLFNVIHYLIQSIRRWVITKEELVHKIIAGHSDITDRKEVEEQLILLQEIVPEWMSEKKSSSGDVLVCINKLASPLTIRSRLEEENKQEMAPLLS