Information report for AT2G31220
Gene Details
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Functional Descriptions
- GO:0052543 — acts upstream of or within — callose deposition in cell wall
- GO:0048658 — acts upstream of or within — anther wall tapetum development
- GO:0046983 — enables — protein dimerization activity
- GO:0003700 — enables — DNA-binding transcription factor activity
- GO:0005634 — located in — nucleus
- GO:0006355 — acts upstream of or within — regulation of DNA-templated transcription
- GO:0005515 — enables — protein binding
- GO:0009555 — acts upstream of or within — pollen development
- bhlh010 bhlh089 — Anthers on early flowers fail to produce pollen grains, anthers on later flowers produce a small number of pollen grains. Tapetum does not develop normally. Callose cell wall is thinner.
- bhlh010 bhlh089 — Normal vegetative growth and floral organs.
- bhlh010 bhlh091 — Aborted pollen occasionally observed. Anther size and number of pollen grains obviously reduced. Tapetum does not develop normally.
- bhlh010 bhlh091 — Normal vegetative growth and floral organs.
Functional Keywords
Literature and News
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- The basic helix-loop-helix transcription factor family in plants: a genome-wide study of protein structure and functional diversity. DOI: 10.1093/molbev/msg088 ; PMID: 12679534
- The Arabidopsis basic/helix-loop-helix transcription factor family. DOI: 10.1105/tpc.013839 ; PMID: 12897250
- Update on the basic helix-loop-helix transcription factor gene family in Arabidopsis thaliana. DOI: 10.1105/tpc.151140 ; PMID: 14600211
- Basic helix-loop-helix transcription factor gene family phylogenetics and nomenclature. DOI: 10.1016/j.diff.2010.02.003 ; PMID: 20219281
- The DYT1-interacting proteins bHLH010, bHLH089 and bHLH091 are redundantly required for Arabidopsis anther development and transcriptome. DOI: 10.1111/tpj.12942 ; PMID: 26216374
- Feedback Regulation of DYT1 by Interactions with Downstream bHLH Factors Promotes DYT1 Nuclear Localization and Anther Development. DOI: 10.1105/tpc.15.00986 ; PMID: 27113773
- The G-Box Transcriptional Regulatory Code in Arabidopsis. DOI: 10.1104/pp.17.01086 ; PMID: 28864470
- Analyses of functional conservation and divergence reveal requirement of bHLH010/089/091 for pollen development at elevated temperature in Arabidopsis. DOI: 10.1016/j.jgg.2020.09.001 ; PMID: 33393464
- Iron insufficiency in floral buds impairs pollen development by disrupting tapetum function. DOI: 10.1111/tpj.15438 ; PMID: 34310779
- Pollen Number and Ribosome Gene Expression Altered in a Genome-Editing Mutant of REDUCED POLLEN NUMBER1 Gene. DOI: 10.3389/fpls.2021.768584 ; PMID: 35087546
- bHLH010/089 Transcription Factors Control Pollen Wall Development via Specific Transcriptional and Metabolic Networks in Arabidopsis thaliana. DOI: 10.3390/ijms231911683 ; PMID: 36232985
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- The basic helix-loop-helix transcription factor family in plants: a genome-wide study of protein structure and functional diversity. DOI: 10.1093/molbev/msg088 ; PMID: 12679534
Gene Resources
- UniProt: A0A2H1ZE48
- EMBL: CP002685
- AlphaFoldDB: A0A2H1ZE48
- EnsemblPlants: AT2G31220.1
- Gramene: AT2G31220.1
- Orthologous matrix: MAYANHT
- ExpressionAtlas: AT2G31220
- InterPro: IPR011598, IPR036638, IPR045895
- PANTHER: PTHR46834, PTHR46834:SF1
- SUPFAM: SSF47459
- PROSITE: PS50888
- Gene3D: 4.10.280.10
- SWISS-MODEL: A0A2H1ZE48
- Conserved Domain Database: cd18918
Homologs
- Brassica napus GSBRNA2T00048621001, GSBRNA2T00020547001, GSBRNA2T00085729001, GSBRNA2T00027161001, GSBRNA2T00031996001, GSBRNA2T00087993001
- Brassica oleracea XP_013634648.1, XP_013633827.1, XP_013633829.1, XP_013633828.1, XP_013584762.1
- Brassica rapa XP_009141141.1, XP_009144239.1, XP_009144238.1
- Raphanus raphanistrum RrC8172_p2
Sequences
cDNA Sequence
- >AT2G31220.1
TCGTTCTGGAAGATCTAAATTAGTGTTTGAGTTACAAACGCAGAAGAAAGAGAAAGCCTTTACGAGGAAATGGGTTGTTTCGATCCCAACACTCCAGCAGAAGTTACGGTGGAGAGTAGCTTCTCTCAAGCCGAACCACCACCACCACCACCGCAAGTTCTGGTTGCCGGAAGCACAAGCAACAGCAACTGCAGTGTTGAGGTAGAAGAGCTCTCTGAATTCCATCTCAGCCCACAAGATTGTCCTCAAGCTTCTTCAACACCTCTCCAGTTTCACATCAATCCTCCTCCTCCACCACCTCCTCCTTGTGATCAACTCCACAACAATTTGATTCACCAAATGGCTTCACATCAACAACAACACTCTAATTGGGATAATGGGTATCAGGATTTTGTGAATTTGGGACCTAACTCTGCAACAACTCCTGATTTGCTTAGTCTCTTACACTTGCCTAGATGCTCATTGCCTCCTAATCATCATCCTTCCTCTATGCTACCTACCTCTTTCTCAGACATTATGTCTTCTTCTTCTGCTGCTGCTGTTATGTACGACCCTCTCTTCCATTTGAATTTCCCTATGCAGCCTAGAGATCAGAACCAGCTAAGAAACGGCTCTTGTTTACTTGGAGTTGAAGATCAAATTCAGATGGATGCTAATGGAGGAATGAATGTTTTGTACTTTGAAGGAGCAAACAACAACAATGGTGGATTTGAGAATGAGATTCTTGAGTTTAACAATGGAGTTACTCGTAAAGGAAGAGGATCAAGAAAGTCGAGAACTTCCCCTACAGAACGTGAGAGACGAGTTCACTTCAATGATCGTTTCTTCGACTTAAAGAACCTCATTCCAAATCCCACAAAGATTGATAGAGCATCGATAGTTGGAGAGGCGATAGATTACATCAAAGAGCTTTTAAGGACAATAGAGGAGTTTAAGATGCTTGTGGAGAAGAAGAGATGTGGGAGATTCAGGAGCAAGAAGAGAGCTAGAGTTGGTGAAGGAGGAGGAGGAGAAGATCAAGAAGAAGAAGAAGACACTGTGAATTACAAGCCACAGAGCGAAGTAGACCAGTCTTGCTTCAACAAGAACAACAACAACTCACTGAGATGTTCATGGCTTAAGAGGAAATCGAAAGTCACTGAGGTCGATGTACGTATAATCGATGATGAAGTAACCATCAAGCTTGTTCAGAAGAAGAAGATTAACTGTTTGTTGTTCACCACCAAAGTTCTTGATCAGCTTCAGCTAGATCTTCACCATGTTGCAGGTGGACAGATTGGTGAACATTACAGCTTCTTGTTCAACACTAAGATTTGTGAAGGATCTTGTGTGTATGCAAGTGGAATTGCAGACACATTGATGGAGGTCGTGGAGAAGCAGTACATGGAAGCTGTTCCTAGCAACGGCTACTAGATTCCAGACACACTTATGGAGTAGTTTATTGCTTTTTAATAACTTTTGTGATACCCCTCTAATGACTGATTAAGTTATTAATCACTTTGGTAATTTTCAAGTTTATTTAGCTAGAGTTAAAGTTAGAGCTAGAGCTGAGGCTCTTTGTCTGGATTTTGTCTAACTCTATATATTTCTTCTAGCTTTATCGGTTTCGTTTTTCGACCAC - >AT2G31220.2
TCGTTCTGGAAGATCTAAATTAGTGTTTGAGTTACAAACGCAGAAGAAAGAGAAAGCCTTTACGAGGAAATGGGTTGTTTCGATCCCAACACTCCAGCAGAAGTTACGGTGGAGAGTAGCTTCTCTCAAGCCGAACCACCACCACCACCACCGCAAGTTCTGGTTGCCGGAAGCACAAGCAACAGCAACTGCAGTGTTGAGGTAGAAGAGCTCTCTGAATTCCATCTCAGCCCACAAGATTGTCCTCAAGCTTCTTCAACACCTCTCCAGTTTCACATCAATCCTCCTCCTCCACCACCTCCTCCTTGTGATCAACTCCACAACAATTTGATTCACCAAATGGCTTCACATCAACAACAACACTCTAATTGGGATAATGGGTATCAGGATTTTGTGAATTTGGGACCTAACTCTGCAACAACTCCTGATTTGCTTAGTCTCTTACACTTGCCTAGATGCTCATTGCCTCCTAATCATCATCCTTCCTCTATGCTACCTACCTCTTTCTCAGACATTATGTCTTCTTCTTCTGCTGCTGCTGTTATGTACGACCCTCTCTTCCATTTGAATTTCCCTATGCAGCCTAGAGATCAGAACCAGCTAAGAAACGGCTCTTGTTTACTTGGAGTTGAAGATCAAATTCAGATGGATGCTAATGGAGGAATGAATGTTTTGTACTTTGAAGGAGCAAACAACAACAATGGTGGATTTGAGAATGAGATTCTTGAGTTTAACAATGGAGTTACTCGTAAAGGAAGAGGATCAAGAAAGTCGAGAACTTCCCCTACAGAACGTGAGAGACGAGTTCACTTCAATGATCGTTTCTTCGACTTAAAGAACCTCATTCCAAATCCCACAAAGATTGATAGAGCATCGATAGTTGGAGAGGCGATAGATTACATCAAAGAGCTTTTAAGGACAATAGAGGAGTTTAAGATGCTTGTGGAGAAGAAGAGATGTGGGAGATTCAGGAGCAAGAAGAGAGCTAGAGTTGGTGAAGGAGGAGGAGGAGAAGATCAAGAAGAAGAAGAAGACACTGTGAATTACAAGCCACAGAGCGAAGTAGACCAGTCTTGCTTCAACAAGAACAACAACAACTCACTGAGATGTTCATGGCTTAAGAGGAAATCGAAAGTCACTGAGGTCGATGTACGTATAATCGATGATGAAGTAACCATCAAGCTTGTTCAGAAGAAGAAGATTAACTGTTTGTTGTTCACCACCAAAGTTCTTGATCAGCTTCAGCTAGATCTTCACCATGTTGCAGGTGGACAGATTGGTGAACATTACAGCTTCTTGTTCAACACTAAGATTTGTGAAGGATCTTGTGTGTATGCAAGTGGAATTGCAGACACATTGATGGAGGTCGTGGAGAAGCAGTACATGGAAGCTGTTCCTAGCAACGGCTACTAGATTCCAGACACACTTATGGAGTAGTTTATTGCTTTTTAATAACTTTTGTGATACCCCTCTAATGACTGATTAAGTTATTAATCACTTTGGTAATTTTCAAGTTTATTTAGCTAGAGTTAAAGTTAGAGCTAGAGCTGAGGCTCTTTGTCTGGATTTTGTCTAACTCTATATATTTCTTCTAGCTTTATCGGTTTCGTTTTTCGACCAC
CDS Sequence
- >AT2G31220.1
ATGGGTTGTTTCGATCCCAACACTCCAGCAGAAGTTACGGTGGAGAGTAGCTTCTCTCAAGCCGAACCACCACCACCACCACCGCAAGTTCTGGTTGCCGGAAGCACAAGCAACAGCAACTGCAGTGTTGAGGTAGAAGAGCTCTCTGAATTCCATCTCAGCCCACAAGATTGTCCTCAAGCTTCTTCAACACCTCTCCAGTTTCACATCAATCCTCCTCCTCCACCACCTCCTCCTTGTGATCAACTCCACAACAATTTGATTCACCAAATGGCTTCACATCAACAACAACACTCTAATTGGGATAATGGGTATCAGGATTTTGTGAATTTGGGACCTAACTCTGCAACAACTCCTGATTTGCTTAGTCTCTTACACTTGCCTAGATGCTCATTGCCTCCTAATCATCATCCTTCCTCTATGCTACCTACCTCTTTCTCAGACATTATGTCTTCTTCTTCTGCTGCTGCTGTTATGTACGACCCTCTCTTCCATTTGAATTTCCCTATGCAGCCTAGAGATCAGAACCAGCTAAGAAACGGCTCTTGTTTACTTGGAGTTGAAGATCAAATTCAGATGGATGCTAATGGAGGAATGAATGTTTTGTACTTTGAAGGAGCAAACAACAACAATGGTGGATTTGAGAATGAGATTCTTGAGTTTAACAATGGAGTTACTCGTAAAGGAAGAGGATCAAGAAAGTCGAGAACTTCCCCTACAGAACGTGAGAGACGAGTTCACTTCAATGATCGTTTCTTCGACTTAAAGAACCTCATTCCAAATCCCACAAAGATTGATAGAGCATCGATAGTTGGAGAGGCGATAGATTACATCAAAGAGCTTTTAAGGACAATAGAGGAGTTTAAGATGCTTGTGGAGAAGAAGAGATGTGGGAGATTCAGGAGCAAGAAGAGAGCTAGAGTTGGTGAAGGAGGAGGAGGAGAAGATCAAGAAGAAGAAGAAGACACTGTGAATTACAAGCCACAGAGCGAAGTAGACCAGTCTTGCTTCAACAAGAACAACAACAACTCACTGAGATGTTCATGGCTTAAGAGGAAATCGAAAGTCACTGAGGTCGATGTACGTATAATCGATGATGAAGTAACCATCAAGCTTGTTCAGAAGAAGAAGATTAACTGTTTGTTGTTCACCACCAAAGTTCTTGATCAGCTTCAGCTAGATCTTCACCATGTTGCAGGTGGACAGATTGGTGAACATTACAGCTTCTTGTTCAACACTAAGATTTGTGAAGGATCTTGTGTGTATGCAAGTGGAATTGCAGACACATTGATGGAGGTCGTGGAGAAGCAGTACATGGAAGCTGTTCCTAGCAACGGCTACTAG - >AT2G31220.2
ATGGGTTGTTTCGATCCCAACACTCCAGCAGAAGTTACGGTGGAGAGTAGCTTCTCTCAAGCCGAACCACCACCACCACCACCGCAAGTTCTGGTTGCCGGAAGCACAAGCAACAGCAACTGCAGTGTTGAGGTAGAAGAGCTCTCTGAATTCCATCTCAGCCCACAAGATTGTCCTCAAGCTTCTTCAACACCTCTCCAGTTTCACATCAATCCTCCTCCTCCACCACCTCCTCCTTGTGATCAACTCCACAACAATTTGATTCACCAAATGGCTTCACATCAACAACAACACTCTAATTGGGATAATGGGTATCAGGATTTTGTGAATTTGGGACCTAACTCTGCAACAACTCCTGATTTGCTTAGTCTCTTACACTTGCCTAGATGCTCATTGCCTCCTAATCATCATCCTTCCTCTATGCTACCTACCTCTTTCTCAGACATTATGTCTTCTTCTTCTGCTGCTGCTGTTATGTACGACCCTCTCTTCCATTTGAATTTCCCTATGCAGCCTAGAGATCAGAACCAGCTAAGAAACGGCTCTTGTTTACTTGGAGTTGAAGATCAAATTCAGATGGATGCTAATGGAGGAATGAATGTTTTGTACTTTGAAGGAGCAAACAACAACAATGGTGGATTTGAGAATGAGATTCTTGAGTTTAACAATGGAGTTACTCGTAAAGGAAGAGGATCAAGAAAGTCGAGAACTTCCCCTACAGAACGTGAGAGACGAGTTCACTTCAATGATCGTTTCTTCGACTTAAAGAACCTCATTCCAAATCCCACAAAGATTGATAGAGCATCGATAGTTGGAGAGGCGATAGATTACATCAAAGAGCTTTTAAGGACAATAGAGGAGTTTAAGATGCTTGTGGAGAAGAAGAGATGTGGGAGATTCAGGAGCAAGAAGAGAGCTAGAGTTGGTGAAGGAGGAGGAGGAGAAGATCAAGAAGAAGAAGAAGACACTGTGAATTACAAGCCACAGAGCGAAGTAGACCAGTCTTGCTTCAACAAGAACAACAACAACTCACTGAGATGTTCATGGCTTAAGAGGAAATCGAAAGTCACTGAGGTCGATGTACGTATAATCGATGATGAAGTAACCATCAAGCTTGTTCAGAAGAAGAAGATTAACTGTTTGTTGTTCACCACCAAAGTTCTTGATCAGCTTCAGCTAGATCTTCACCATGTTGCAGGTGGACAGATTGGTGAACATTACAGCTTCTTGTTCAACACTAAGATTTGTGAAGGATCTTGTGTGTATGCAAGTGGAATTGCAGACACATTGATGGAGGTCGTGGAGAAGCAGTACATGGAAGCTGTTCCTAGCAACGGCTACTAG
Protein Sequence
- >AT2G31220.1
MGCFDPNTPAEVTVESSFSQAEPPPPPPQVLVAGSTSNSNCSVEVEELSEFHLSPQDCPQASSTPLQFHINPPPPPPPPCDQLHNNLIHQMASHQQQHSNWDNGYQDFVNLGPNSATTPDLLSLLHLPRCSLPPNHHPSSMLPTSFSDIMSSSSAAAVMYDPLFHLNFPMQPRDQNQLRNGSCLLGVEDQIQMDANGGMNVLYFEGANNNNGGFENEILEFNNGVTRKGRGSRKSRTSPTERERRVHFNDRFFDLKNLIPNPTKIDRASIVGEAIDYIKELLRTIEEFKMLVEKKRCGRFRSKKRARVGEGGGGEDQEEEEDTVNYKPQSEVDQSCFNKNNNNSLRCSWLKRKSKVTEVDVRIIDDEVTIKLVQKKKINCLLFTTKVLDQLQLDLHHVAGGQIGEHYSFLFNTKICEGSCVYASGIADTLMEVVEKQYMEAVPSNGY - >AT2G31220.2
MGCFDPNTPAEVTVESSFSQAEPPPPPPQVLVAGSTSNSNCSVEVEELSEFHLSPQDCPQASSTPLQFHINPPPPPPPPCDQLHNNLIHQMASHQQQHSNWDNGYQDFVNLGPNSATTPDLLSLLHLPRCSLPPNHHPSSMLPTSFSDIMSSSSAAAVMYDPLFHLNFPMQPRDQNQLRNGSCLLGVEDQIQMDANGGMNVLYFEGANNNNGGFENEILEFNNGVTRKGRGSRKSRTSPTERERRVHFNDRFFDLKNLIPNPTKIDRASIVGEAIDYIKELLRTIEEFKMLVEKKRCGRFRSKKRARVGEGGGGEDQEEEEDTVNYKPQSEVDQSCFNKNNNNSLRCSWLKRKSKVTEVDVRIIDDEVTIKLVQKKKINCLLFTTKVLDQLQLDLHHVAGGQIGEHYSFLFNTKICEGSCVYASGIADTLMEVVEKQYMEAVPSNGY