Information report for AT2G31070
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0000056 — flower bud — floral bud (exact), yema floral (Spanish, exact), 花芽 (Japanese, exact)
- PO:0009001 — fruit — frucht (exact, German), fruto (exact, Spanish), 果実 (exact, Japanese), coenocarp (narrow), syncarp (narrow), aggregate fruit (broad), compound fruit (broad), dehiscent fruit (broad), diaspore (broad), indehiscent fruit (broad), multiple fruit (broad), propagule (broad)
- PO:0009047 — stem — caña (Spanish, exact), culm (exact), eje primario (Spanish, exact), primary axis (exact), primary stem (exact), tallo (Spanish, exact), tronco (Spanish, exact), 茎 (Japanese, exact), bole (narrow), cane (narrow), caudex (narrow), caudices (narrow), core (narrow), primocane (narrow), scape (narrow), stalk (narrow), trunk (narrow)
- GO:0005515 — enables — protein binding
- GO:0006355 — acts upstream of or within — regulation of DNA-templated transcription
- GO:2000032 — involved in — regulation of secondary shoot formation
- GO:0045962 — acts upstream of or within — positive regulation of development, heterochronic
- GO:0009965 — acts upstream of or within — leaf morphogenesis
- GO:0030154 — acts upstream of or within — cell differentiation
- GO:0010150 — acts upstream of or within — leaf senescence
- GO:0043565 — enables — sequence-specific DNA binding
- GO:0005634 — located in — nucleus
- GO:0005634 — is active in — nucleus
- GO:0048366 — acts upstream of or within — leaf development
- GO:0003700 — enables — DNA-binding transcription factor activity
Functional Keywords
- shoot axis apex , leaf lamina base , root , shoot system , plant embryo , vascular leaf , stamen , sepal , flower , inflorescence flower pedicel , cotyledon , petiole , hypocotyl , leaf apex , collective leaf structure , flower bud , fruit , root , vascular leaf , flower , stem , cotyledon
Literature and News
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- Two types of putative nuclear factors that physically interact with histidine-containing phosphotransfer (Hpt) domains, signaling mediators in His-to-Asp phosphorelay, in Arabidopsis thaliana. DOI: 10.1093/pcp/pce011 ; PMID: 11158442
- An indole-3-acetic acid carboxyl methyltransferase regulates Arabidopsis leaf development. DOI: 10.1105/tpc.105.034959 ; PMID: 16169896
- Diversity and evolution of CYCLOIDEA-like TCP genes in relation to flower development in Papaveraceae. DOI: 10.1104/pp.106.090324 ; PMID: 17189327
- TCP transcription factors control the morphology of shoot lateral organs via negative regulation of the expression of boundary-specific genes in Arabidopsis. DOI: 10.1105/tpc.106.044792 ; PMID: 17307931
- A protracted and dynamic maturation schedule underlies Arabidopsis leaf development. DOI: 10.1105/tpc.107.057521 ; PMID: 18805992
- miR319a targeting of TCP4 is critical for petal growth and development in Arabidopsis. DOI: 10.1073/pnas.0908718106 ; PMID: 20007771
- TCP transcription factors regulate the activities of ASYMMETRIC LEAVES1 and miR164, as well as the auxin response, during differentiation of leaves in Arabidopsis. DOI: 10.1105/tpc.110.075598 ; PMID: 21119060
- Roles of miR319 and TCP Transcription Factors in Leaf Development. DOI: 10.1104/pp.17.00732 ; PMID: 28842549
- Spatial Control of Gene Expression by miR319-Regulated TCP Transcription Factors in Leaf Development. DOI: 10.1104/pp.17.00823 ; PMID: 29133375
- Alterations of plant architecture and phase transition by the phytoplasma virulence factor SAP11. DOI: 10.1093/jxb/ery318 ; PMID: 30165491
- Inhibition of Arabidopsis thaliana CIN-like TCP transcription factors by Agrobacterium T-DNA-encoded 6B proteins. DOI: 10.1111/tpj.14591 ; PMID: 31659801
- The function of the WRI1-TCP4 regulatory module in lipid biosynthesis. DOI: 10.1080/15592324.2020.1812878 ; PMID: 32880205
- TCP transcription factors suppress cotyledon trichomes by impeding a cell differentiation-regulating complex. DOI: 10.1093/plphys/kiab053 ; PMID: 33576799
- An Expanding Portfolio. DOI: 10.3389/fpls.2022.825341 ; PMID: 35273626
- Arabidopsis transcription factor TCP4 represses chlorophyll biosynthesis to prevent petal greening. DOI: 10.1016/j.xplc.2022.100309 ; PMID: 35605201
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- Two types of putative nuclear factors that physically interact with histidine-containing phosphotransfer (Hpt) domains, signaling mediators in His-to-Asp phosphorelay, in Arabidopsis thaliana. DOI: 10.1093/pcp/pce011 ; PMID: 11158442
- An indole-3-acetic acid carboxyl methyltransferase regulates Arabidopsis leaf development. DOI: 10.1105/tpc.105.034959 ; PMID: 16169896
- TCP transcription factors control the morphology of shoot lateral organs via negative regulation of the expression of boundary-specific genes in Arabidopsis. DOI: 10.1105/tpc.106.044792 ; PMID: 17307931
Gene Resources
- UniProt: A0A654EZ53
- EMBL: CACRSJ010000105, LR881467
- AlphaFoldDB: A0A654EZ53
- EnsemblPlants: AT2G31070.1
- Gramene: AT2G31070.1
- KEGG: ath:AT2G31070
- Orthologous matrix: WSDIPMA
- ExpressionAtlas: AT2G31070
- InterPro: IPR005333, IPR017887
- PANTHER: PTHR31072, PTHR31072:SF240
- PROSITE: PS51369
- SWISS-MODEL: A0A654EZ53
Homologs
- Brassica napus GSBRNA2T00048595001, GSBRNA2T00027113001, GSBRNA2T00048597001
- Brassica oleracea XP_013637423.1, XP_013637422.1, XP_013637421.1
- Brassica rapa XP_009144259.1, XP_009144258.1
- Populus trichocarpa Potri.019G091300.1
- Raphanus raphanistrum RrC1855_p1
- Ricinus communis 29646.m001101
Sequences
cDNA Sequence
- >AT2G31070.1
TTTATTTAGTTTACTTTCCTATTCTGAACCCTTAACTTCTGCTATCCTTTCCACCAACAATCTAATAGTATACTCTCTCTCTTTTTTTTCCTCTTCTTCTTCTTGTCCTTCGATTTTAGACCAACTAAACATATCAATATATTAAAGTAGCATCTCTCTCTCTCTCTCTCTCTCTCTCTCGCTCTTTTATTTTTAATATCAATTTTGTTGTCCAAATTCTCATCTCTTTGGGAAAACCCTAGACTAAAGATTCCAATCTCTTTTCTTCTAAATATTTCTTCATTTTTTCCCTTTTTTGATTTGGGTATGTTGGGTCATTGAATCTTGTGACTGCCATGGCAGATCTTTTGGGGATCTGCATAGAAGAGTTGCTTCTTGTAGCAGCTTTCAGGTAGCTGTGTCCAGCCTGCATCAGATGTTATTAACTCACTACACACCAAACACCACAATAACAACAAAACGGCAAGCATTTTGAAGAGGTAAACAAAGCAAGTGGGCAACAAAAACGGCACGCAAGTTTTTCTTCCAAGTTAAAACAACTCTTGGAATGTCATTTTGAAAGGTAAAAAAATAATGGGACTTAAAGGATATAGCGTCGGAGAAGGAGGAGGAGAGATAGTTGAGGTTCAAGGCGGTCACATAATCCGAGCCACTGGACGCAAAGACCGTCATAGCAAAGTGTTCACATCAAAGGGTCCACGTGACCGGCGCGTGAGACTCTCAGCTCACACGGCGATTCAATTCTACGATGTGCAAGACCGGTTAGGTTATGACCGGCCTAGCAAAGCCGTTGATTGGCTCATCAAGAAAGCCAAAACCGCTATTGATAAGCTTGAACTCGGGGAGACTACTACTACTACTACTCGTCAAGAACCGGTGAATACTAAACCGGAATCTCCCACTTTGGTTTTCCAAAGAGAGAACAATGACCAAACGCAGTTCGTGGCGGCCAATCTTGATCCTGAAGACGCAATGAAAACGTTTTTCCCGGCGACGACAACAACAAACGGTGGTGGTGGTACAAACATCAATTTCCAAAACTACCCTCATCAGGATGACAACAACATGGTCTCAAGAACAACAACACCACCACCAAACCTTAGCCAAGATCTTGGTCTCTCTCTTCACCCATTTCAAGGGAACAACAACACAGTCGTAGTTCCCGAGACCAACAATTTCACCACGACTCATTTCGACACGTTCGGGAGAATCTCTGGATGGAATCATCACGACTTAACTATGACGTCATCATCCTCATCAGAACATCAACAACAAGAACAAGAAGAAAGGAGTAATGGTGGTTTCATGGTGAATCATCATCCTCACCATCATCATCATCAACCGTCGATGATGACATTGCTTAATAGTCAGCAACAACAAGTGTTTCTTGGTGGCCAACAACAACAACAACAAAGGGGTACCCTTCAGTCCAGTTTATTCCCTCATTCGTTTCGTTCTTGGGATCATCATCAAACGACGTCGGATCATCATCATCATCAGAATCAAGCTTCTTCGATGTTTGCTTCATCATCACAGTATGGTTCTCATGGGATGATGATGATGCAAGGCCTTAGTTTCCCCAACACTACAAGACTACTCCACGGAGAAGAAGCTACTCAACCAAACTCTTCTTCTTCTCCTCCAAACTCACACCTCTAAACTAAGACAACCATGGAGGTTCAAATTCATGATGACATGCATTGAACAAGAAGGAGGAAATTAATGTGATGAATGGAGCTAGAGTAAGCGCTATATTAATTAGTATTACCATCTATCCATATATTTATGATTCAAGACTATTATTACTCATTTAGTGTTTGTTATTATTATTCAATTTTGCTTGTTTGTTTCTTATCATCTTTGCATTGATCATCAAGATTGTGATATTTGAAAAGATGGGTTTTATGTGTGTTTTGGTTTAGTACTGGCGTTAGGCTGGGATATTGTAATCTCATATTTTTGTTCTACGAGTGAGTTTGAATTTTCTGGTTTTTACTTGCGGTTTCTATTTCTTCGGTTAAGTAAAGAGTAATTGAAGAACGTTAAAAGC
CDS Sequence
- >AT2G31070.1
ATGGGACTTAAAGGATATAGCGTCGGAGAAGGAGGAGGAGAGATAGTTGAGGTTCAAGGCGGTCACATAATCCGAGCCACTGGACGCAAAGACCGTCATAGCAAAGTGTTCACATCAAAGGGTCCACGTGACCGGCGCGTGAGACTCTCAGCTCACACGGCGATTCAATTCTACGATGTGCAAGACCGGTTAGGTTATGACCGGCCTAGCAAAGCCGTTGATTGGCTCATCAAGAAAGCCAAAACCGCTATTGATAAGCTTGAACTCGGGGAGACTACTACTACTACTACTCGTCAAGAACCGGTGAATACTAAACCGGAATCTCCCACTTTGGTTTTCCAAAGAGAGAACAATGACCAAACGCAGTTCGTGGCGGCCAATCTTGATCCTGAAGACGCAATGAAAACGTTTTTCCCGGCGACGACAACAACAAACGGTGGTGGTGGTACAAACATCAATTTCCAAAACTACCCTCATCAGGATGACAACAACATGGTCTCAAGAACAACAACACCACCACCAAACCTTAGCCAAGATCTTGGTCTCTCTCTTCACCCATTTCAAGGGAACAACAACACAGTCGTAGTTCCCGAGACCAACAATTTCACCACGACTCATTTCGACACGTTCGGGAGAATCTCTGGATGGAATCATCACGACTTAACTATGACGTCATCATCCTCATCAGAACATCAACAACAAGAACAAGAAGAAAGGAGTAATGGTGGTTTCATGGTGAATCATCATCCTCACCATCATCATCATCAACCGTCGATGATGACATTGCTTAATAGTCAGCAACAACAAGTGTTTCTTGGTGGCCAACAACAACAACAACAAAGGGGTACCCTTCAGTCCAGTTTATTCCCTCATTCGTTTCGTTCTTGGGATCATCATCAAACGACGTCGGATCATCATCATCATCAGAATCAAGCTTCTTCGATGTTTGCTTCATCATCACAGTATGGTTCTCATGGGATGATGATGATGCAAGGCCTTAGTTTCCCCAACACTACAAGACTACTCCACGGAGAAGAAGCTACTCAACCAAACTCTTCTTCTTCTCCTCCAAACTCACACCTCTAA
Protein Sequence
- >AT2G31070.1
MGLKGYSVGEGGGEIVEVQGGHIIRATGRKDRHSKVFTSKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKTAIDKLELGETTTTTTRQEPVNTKPESPTLVFQRENNDQTQFVAANLDPEDAMKTFFPATTTTNGGGGTNINFQNYPHQDDNNMVSRTTTPPPNLSQDLGLSLHPFQGNNNTVVVPETNNFTTTHFDTFGRISGWNHHDLTMTSSSSSEHQQQEQEERSNGGFMVNHHPHHHHHQPSMMTLLNSQQQQVFLGGQQQQQQRGTLQSSLFPHSFRSWDHHQTTSDHHHHQNQASSMFASSSQYGSHGMMMMQGLSFPNTTRLLHGEEATQPNSSSSPPNSHL