Information report for AT2G30790
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
Functional Keywords
Literature and News
- Proteome map of the chloroplast lumen of Arabidopsis thaliana. DOI: 10.1074/jbc.M108575200 ; PMID: 11719511
- Central functions of the lumenal and peripheral thylakoid proteome of Arabidopsis determined by experimentation and genome-wide prediction. DOI: 10.1105/tpc.010304 ; PMID: 11826309
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- Cross-species microarray transcript profiling reveals high constitutive expression of metal homeostasis genes in shoots of the zinc hyperaccumulator Arabidopsis halleri. DOI: 10.1046/j.1365-313x.2003.01959.x ; PMID: 14690509
- In-depth analysis of the thylakoid membrane proteome of Arabidopsis thaliana chloroplasts: new proteins, new functions, and a plastid proteome database. DOI: 10.1105/tpc.017814 ; PMID: 14729914
- An inducible targeted tagging system for localized saturation mutagenesis in Arabidopsis. DOI: 10.1104/pp.104.050633 ; PMID: 15644463
- Microarray analysis of genes that respond to gamma-irradiation in Arabidopsis. DOI: 10.1021/jf0486895 ; PMID: 15713015
- Functional dissection of two Arabidopsis PsbO proteins: PsbO1 and PsbO2. DOI: 10.1111/j.1742-4658.2005.04636.x ; PMID: 15853801
- The cold-induced early activation of phospholipase C and D pathways determines the response of two distinct clusters of genes in Arabidopsis cell suspensions. DOI: 10.1104/pp.105.068171 ; PMID: 16258011
- Characterization of an Arabidopsis thaliana mutant lacking a cytosolic non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase. DOI: 10.1007/s11103-006-0060-5 ; PMID: 16927206
- The chloroplast lumen and stromal proteomes of Arabidopsis thaliana show and long-term exposure to low temperature. DOI: 10.1111/j.1365-313X.2006.02821.x ; PMID: 16923014
- Distinct functions for the two PsbP-like proteins PPL1 and PPL2 in the chloroplast thylakoid lumen of Arabidopsis. DOI: 10.1104/pp.107.105866 ; PMID: 17827269
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Quantitative proteomics of a chloroplast SRP54 sorting mutant and its genetic interactions with CLPC1 in Arabidopsis. DOI: 10.1104/pp.108.124545 ; PMID: 18633119
- The effects of simultaneous RNAi suppression of PsbO and PsbP protein expression in photosystem II of Arabidopsis. DOI: 10.1007/s11120-008-9352-8 ; PMID: 18791808
- The PsbP protein, but not the PsbQ protein, is required for normal thylakoid architecture in Arabidopsis thaliana. DOI: 10.1016/j.febslet.2009.05.048 ; PMID: 19500580
- Systems analysis of seed filling in Arabidopsis: using general linear modeling to assess concordance of transcript and protein expression. DOI: 10.1104/pp.109.152413 ; PMID: 20118269
- BAIUCAS: a novel BLAST-based algorithm for the identification of upstream open reading frames with conserved amino acid sequences and its application to the Arabidopsis thaliana genome. DOI: 10.1093/bioinformatics/bts303 ; PMID: 22618534
- Arabidopsis plants lacking PsbQ and PsbR subunits of the oxygen-evolving complex show altered PSII super-complex organization and short-term adaptive mechanisms. DOI: 10.1111/tpj.12230 ; PMID: 23647309
- Proteomic analysis of Arabidopsis thaliana leaves in response to acute boron deficiency and toxicity reveals effects on photosynthesis, carbohydrate metabolism, and protein synthesis. DOI: 10.1016/j.jplph.2013.07.008 ; PMID: 23988561
- Photosystem II Extrinsic Proteins and Their Putative Role in Abiotic Stress Tolerance in Higher Plants. DOI: 10.3390/plants7040100 ; PMID: 30441780
- Proteome map of the chloroplast lumen of Arabidopsis thaliana. DOI: 10.1074/jbc.M108575200 ; PMID: 11719511
- Central functions of the lumenal and peripheral thylakoid proteome of Arabidopsis determined by experimentation and genome-wide prediction. DOI: 10.1105/tpc.010304 ; PMID: 11826309
- In-depth analysis of the thylakoid membrane proteome of Arabidopsis thaliana chloroplasts: new proteins, new functions, and a plastid proteome database. DOI: 10.1105/tpc.017814 ; PMID: 14729914
- The Arabidopsis thaliana chloroplast proteome reveals pathway abundance and novel protein functions. DOI: 10.1016/j.cub.2004.02.039 ; PMID: 15028209
- High light response of the thylakoid proteome in arabidopsis wild type and the ascorbate-deficient mutant vtc2-2. A comparative proteomics study. DOI: 10.1104/pp.106.080150 ; PMID: 16648217
- The PsbP protein is required for photosystem II complex assembly/stability and photoautotrophy in Arabidopsis thaliana. DOI: 10.1074/jbc.M705011200 ; PMID: 17604269
- Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. DOI: 10.1371/journal.pone.0001994 ; PMID: 18431481
Gene Resources
- UniProt: A0A654EZ43
- EMBL: CACRSJ010000105
- AlphaFoldDB: A0A654EZ43
- EnsemblPlants: AT2G30790.1
- Gramene: AT2G30790.1
- KEGG: ath:AT2G30790
- Orthologous matrix: FVEGPWN
- ExpressionAtlas: AT2G30790
- InterPro: IPR002683, IPR016123
- PANTHER: PTHR31407, PTHR31407:SF39
- SUPFAM: SSF55724
- Gene3D: 3.40.1000.10
- SWISS-MODEL: A0A654EZ43
Homologs
- Oryza sativa OsPsbP
Sequences
cDNA Sequence
- >AT2G30790.1
CAAAAATCCAAAAATTAGCCAATAAACAACTCTTTTCTTAAACTCCATATTTACAAACAGTTTCATCACTTTGGTCTTCAGGTTGCAACAAGAAAGAGAAAAAAAGAGAATGGCGTACAGCCCGAGCTTCTTACACCAGAGTGCACTTGCCTCCTCTGCCGGACGATCATCATCTTCATCTTCATCGTCGTTTCGTCATGTGTCCCTCTCGAGACCCGTCCATTTAGTATGTAGAGCTCAACAGTCTCAGGAAAACAATAACTCTGCTGTTTTCCGCCGTCTTGCCCTTACCTTACTCGTTGGTGCTGCAGCCATCGGATCCAAAGTCTCTCCTGCGCCGCCTATGGTGAAGCCGCTAATGTGTTTGGTAAGCCAAAGAAGAACACAGATTTCCTGCCATACACAGGAGAAGGATTCAAAATCCAGATCCCATCAAAGTGGAACCCAAGTAAAGAAATTGAGTATCCAGGACAAGTACTAAGATTCGAGGACAACTTTGACGCCACCAGCAATGTCTCTGTCATGATCACTCCTACAGACAAGAAATCCATCACTGATTACGGTTCTCCTGAACAGTTCCTCTCTCAGGTGAATTATCTCCTCGGGAAGCAAGCTTACGTCGGCGAAACAGCCTCTGAGGGAGGGTTTGATGCAAATGCAGTAGCAACTGCAAACATTTTGGAAACATCTACACAAGAAATCGGAGGGAAAGAATACTATTACTTGTCGGTTCTGACAAGAACAGCTGATGGAGATGAAGGTGGGAAGCACCAACTGATAACAGCCACTGTGAATGGTGGAAAGCTTTACATTTGCAAAGCTCAAGCAGGAGACAAGAGGTGGTTCAAAGGAGCTAGGAAGTTCGTTGAGAATGCTGCTACGTCCTTCAGTGTTGCTTGATATGAATCATAAACATTAATGGAACGCTCTGTTATCTGTTGTCTTCTTCCTCATTGTCCATTGTATAAATAATGGATCAAGAAAAGAAAACAATCATTTGATATCTATAA
CDS Sequence
- >AT2G30790.1
ATGATCACTCCTACAGACAAGAAATCCATCACTGATTACGGTTCTCCTGAACAGTTCCTCTCTCAGGTGAATTATCTCCTCGGGAAGCAAGCTTACGTCGGCGAAACAGCCTCTGAGGGAGGGTTTGATGCAAATGCAGTAGCAACTGCAAACATTTTGGAAACATCTACACAAGAAATCGGAGGGAAAGAATACTATTACTTGTCGGTTCTGACAAGAACAGCTGATGGAGATGAAGGTGGGAAGCACCAACTGATAACAGCCACTGTGAATGGTGGAAAGCTTTACATTTGCAAAGCTCAAGCAGGAGACAAGAGGTGGTTCAAAGGAGCTAGGAAGTTCGTTGAGAATGCTGCTACGTCCTTCAGTGTTGCTTGA
Protein Sequence
- >AT2G30790.1
MITPTDKKSITDYGSPEQFLSQVNYLLGKQAYVGETASEGGFDANAVATANILETSTQEIGGKEYYYLSVLTRTADGDEGGKHQLITATVNGGKLYICKAQAGDKRWFKGARKFVENAATSFSVA