AT2G30350

Gene Details

Gene ID: AT2G30350
Gene Symbol: HIGLE
Gene Name: HYL1 INTERACTING GIY-YIG LIKE ENDONUCLEASE
Description: Excinuclease ABC, C subunit, N-terminal;(source:Araport11)
TAIR Accession: locus:2065775
Genome: Araport11_genome_release
Species: Arabidopsis thaliana

Functional Descriptions

PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
PO:0025195 — pollen tube cell — célula del tubo polínico (Spanish, exact), 花粉管細胞 (Japanese, exact)

GO:0009507 — located in — chloroplast
GO:0033557 — part of — Slx1-Slx4 complex
GO:0044747 — enables — 5-flap endonuclease activity
GO:0004521 — enables — RNA endonuclease activity
GO:0000724 — involved in — double-strand break repair via homologous recombination
GO:0008821 — enables — crossover junction DNA endonuclease activity

SALK_024520C — Seedlings screened in bulk via high throughput methods for responses to various stressors. Results are in comparison to Col-0.heat:no change,cold:no change,oxidative stress:increased,osmotic stress:increased,salt stress:no change,ABA:increased,hypoxia:no change.

Functional Keywords

Literature and News

Gene Resources

Homologs

Sequences

cDNA Sequence

>AT2G30350.2
AATAATCTGTCGTCTTCAACGGTCGAATTGAATCCAAGAGATATGAGAGAGAAAAGGGGAAATCGGAAAGCCCTAGATCCCGTCGGTGAGGATGGAGTCACCGGAAAAGATGGAAAAGGCTTCTTCGCCTGTTATCTCTTGACCTCTCTTAGCCCTCGTCATAAGGGTCAAACCTATATCGGGTTCACTGTAAACCCGAGGCGGAGAATAAGGCAGCACAATGGAGAGATCACTAGTGGTGCTTGGAGAACAAAGAAGAAACGTCCATGGGAAATGGTTCTCTGTATCTATGGTTTCCCCACCAATGTCTCTGCCCTTCAGTTTGAATGGGCTTGGCAGCATCCGAGAGAATCGGTTGCAGTTAGAGAAGCTGCTGCGGCTTTCAAATCCTTCTCTGGGGTTGCTAGTAAGATCAAGCTTGTATATACAATGTTAAATCTTCCAGCTTGGAATAGTTTGAACCTCACGGTTAATTATTTCTCGTCAAAGTATGCACACCACGGTGGTAAATCTCCAAGTTTACCTTTACATATGAAAGTTCAAGTTTGTGCTATGGAGGATCTTCAGTATTTCACAAAGGTAGATGACAGTTCTCAACCCGAAGATGAAGAGAGTCCCGAGGTTAATGAAGAGGATGATGATGATGATGATGATGATAGTAGCAACCTAAGCCAGCCTGGGAATTCAAATACAAGCTCATCGGATGACCGGCATTTTGAAAAAGCGAAAGAACCTGTAACTGTATTTGATGAAGAAGACAGATTAGCAAATTTCAGTGGTTTTGGCTTATTAGATGAAGAAGAGACTGTTGAAGATGAAGTATCACATATCACTGTTGGATCCATTAGAGCTACTGAGAAAGAACCCGAGACTGTATTCAATGACAGATTAGCAAGTTTCACTTGTTTTGGCTTAGTAGAGATTGTTGAAGATGAAGTATCACATGGAACTATAGGATCCACTGAAGCTATGGAGAAAGAGTGTAGGAAAAGAAGGAACCATATCACCTCAACGACGACTGAGGTTGATGTAGAGGTGATAGATCTGATGACTCCATCACCAAGCTGCAGAGCTGGATCATCTATGAAGAGACGAAGAGTTTCTGAGTTTATAGATTTGACTATGTCTCCTAATTTCATAGAGTCGTAGAAGTAATACACGAGAATTTGTGTGAAAATCAAAATCAACTTTGTTGTAATTTTCTTTTATATCTAATAAAAGATTTCAAACCTTTTGA
>AT2G30350.1
AATAATCTGTCGTCTTCAACGGTCGAATTGAATCCAAGAGATATGAGAGAGAAAAGGGGAAATCGGAAAGCCCTAGATCCCGTCGGTGAGGATGGAGTCACCGGAAAAGATGGAAAAGGCTTCTTCGCCTGTTATCTCTTGACCTCTCTTAGCCCTCGTCATAAGGGTCAAACCTATATCGGGTTCACTGTAAACCCGAGGCGGAGAATAAGGCAGCACAATGGAGAGATCACTAGTGGTGCTTGGAGAACAAAGAAGAAACGTCCATGGGAAATGGTTCTCTGTATCTATGGTTTCCCCACCAATGTCTCTGCCCTTCAGTTTGAATGGGCTTGGCAGCATCCGAGAGAATCGGTTGCAGTTAGAGAAGCTGCTGCGGCTTTCAAATCCTTCTCTGGGGTTGCTAGTAAGATCAAGCTTGTATATACAATGTTAAATCTTCCAGCTTGGAATAGTTTGAACCTCACGGTTAATTATTTCTCGTCAAAGTATGCACACCACGGTGGTAAATCTCCAAGTTTACCTTTACATATGAAAGTTCAAGTTTGTGCTATGGAGGATCTTCAGTATTTCACAAAGGTAGATGACAGTTCTCAACCCGAAGATGAAGAGAGTCCCGAGGTTAATGAAGAGGATGATGATGATGATGATGATGATAGTAGCAACCTAAGCCAGCCTGGGAATTCAAATACAAGCTCATCGGATGACCGGCATTTTGAAAAAGCGAAAGAACCTGTAACTGTATTTGATGAAGAAGACAGATTAGCAAATTTCAGTGGTTTTGGCTTATTAGATGAAGAAGAGACTGTTGAAGATGAAGTATCACATATCACTGTTGGATCCATTAGAGCTACTGAGAAAGAACCCGAGACTGTATTCAATGACAGATTAGCAAGTTTCACTTGTTTTGGCTTAGTAGAGATTGTTGAAGATGAAGTATCACATGGAACTATAGGATCCACTGAAGCTATGGAGAAAGAGTGTAGGAAAAGAAGGAACCATATCACCTCAACGACGACTGAGGTTGATGTAGAGGTGATAGATCTGATGACTCCATCACCAAGCTGCAGAGCTGGATCATCTATGAAGAGACGAAGAGTTTCTGAGTTTATAGATTTGACTATGTCTCCTAATTTCATAGAGTCGTAGAAGTAATACACGAGAATTTGTGTGAAAATCAAAATCAACTTTGTTGTAATTTTCTTTTATATCTAATAAAAGATTTCAAACCTTTTGA

CDS Sequence

>AT2G30350.2
ATGAGAGAGAAAAGGGGAAATCGGAAAGCCCTAGATCCCGTCGGTGAGGATGGAGTCACCGGAAAAGATGGAAAAGGCTTCTTCGCCTGTTATCTCTTGACCTCTCTTAGCCCTCGTCATAAGGGTCAAACCTATATCGGGTTCACTGTAAACCCGAGGCGGAGAATAAGGCAGCACAATGGAGAGATCACTAGTGGTGCTTGGAGAACAAAGAAGAAACGTCCATGGGAAATGGTTCTCTGTATCTATGGTTTCCCCACCAATGTCTCTGCCCTTCAGTTTGAATGGGCTTGGCAGCATCCGAGAGAATCGGTTGCAGTTAGAGAAGCTGCTGCGGCTTTCAAATCCTTCTCTGGGGTTGCTAGTAAGATCAAGCTTGTATATACAATGTTAAATCTTCCAGCTTGGAATAGTTTGAACCTCACGGTTAATTATTTCTCGTCAAAGTATGCACACCACGGTGGTAAATCTCCAAGTTTACCTTTACATATGAAAGTTCAAGTTTGTGCTATGGAGGATCTTCAGTATTTCACAAAGGTAGATGACAGTTCTCAACCCGAAGATGAAGAGAGTCCCGAGGTTAATGAAGAGGATGATGATGATGATGATGATGATAGTAGCAACCTAAGCCAGCCTGGGAATTCAAATACAAGCTCATCGGATGACCGGCATTTTGAAAAAGCGAAAGAACCTGTAACTGTATTTGATGAAGAAGACAGATTAGCAAATTTCAGTGGTTTTGGCTTATTAGATGAAGAAGAGACTGTTGAAGATGAAGTATCACATATCACTGTTGGATCCATTAGAGCTACTGAGAAAGAACCCGAGACTGTATTCAATGACAGATTAGCAAGTTTCACTTGTTTTGGCTTAGTAGAGATTGTTGAAGATGAAGTATCACATGGAACTATAGGATCCACTGAAGCTATGGAGAAAGAGTGTAGGAAAAGAAGGAACCATATCACCTCAACGACGACTGAGGTTGATGTAGAGGTGATAGATCTGATGACTCCATCACCAAGCTGCAGAGCTGGATCATCTATGAAGAGACGAAGAGTTTCTGAGTTTATAGATTTGACTATGTCTCCTAATTTCATAGAGTCGTAG
>AT2G30350.1
ATGAGAGAGAAAAGGGGAAATCGGAAAGCCCTAGATCCCGTCGGTGAGGATGGAGTCACCGGAAAAGATGGAAAAGGCTTCTTCGCCTGTTATCTCTTGACCTCTCTTAGCCCTCGTCATAAGGGTCAAACCTATATCGGGTTCACTGTAAACCCGAGGCGGAGAATAAGGCAGCACAATGGAGAGATCACTAGTGGTGCTTGGAGAACAAAGAAGAAACGTCCATGGGAAATGGTTCTCTGTATCTATGGTTTCCCCACCAATGTCTCTGCCCTTCAGTTTGAATGGGCTTGGCAGCATCCGAGAGAATCGGTTGCAGTTAGAGAAGCTGCTGCGGCTTTCAAATCCTTCTCTGGGGTTGCTAGTAAGATCAAGCTTGTATATACAATGTTAAATCTTCCAGCTTGGAATAGTTTGAACCTCACGGTTAATTATTTCTCGTCAAAGTATGCACACCACGGTGGTAAATCTCCAAGTTTACCTTTACATATGAAAGTTCAAGTTTGTGCTATGGAGGATCTTCAGTATTTCACAAAGGTAGATGACAGTTCTCAACCCGAAGATGAAGAGAGTCCCGAGGTTAATGAAGAGGATGATGATGATGATGATGATGATAGTAGCAACCTAAGCCAGCCTGGGAATTCAAATACAAGCTCATCGGATGACCGGCATTTTGAAAAAGCGAAAGAACCTGTAACTGTATTTGATGAAGAAGACAGATTAGCAAATTTCAGTGGTTTTGGCTTATTAGATGAAGAAGAGACTGTTGAAGATGAAGTATCACATATCACTGTTGGATCCATTAGAGCTACTGAGAAAGAACCCGAGACTGTATTCAATGACAGATTAGCAAGTTTCACTTGTTTTGGCTTAGTAGAGATTGTTGAAGATGAAGTATCACATGGAACTATAGGATCCACTGAAGCTATGGAGAAAGAGTGTAGGAAAAGAAGGAACCATATCACCTCAACGACGACTGAGGTTGATGTAGAGGTGATAGATCTGATGACTCCATCACCAAGCTGCAGAGCTGGATCATCTATGAAGAGACGAAGAGTTTCTGAGTTTATAGATTTGACTATGTCTCCTAATTTCATAGAGTCGTAG

Protein Sequence

>AT2G30350.2
MREKRGNRKALDPVGEDGVTGKDGKGFFACYLLTSLSPRHKGQTYIGFTVNPRRRIRQHNGEITSGAWRTKKKRPWEMVLCIYGFPTNVSALQFEWAWQHPRESVAVREAAAAFKSFSGVASKIKLVYTMLNLPAWNSLNLTVNYFSSKYAHHGGKSPSLPLHMKVQVCAMEDLQYFTKVDDSSQPEDEESPEVNEEDDDDDDDDSSNLSQPGNSNTSSSDDRHFEKAKEPVTVFDEEDRLANFSGFGLLDEEETVEDEVSHITVGSIRATEKEPETVFNDRLASFTCFGLVEIVEDEVSHGTIGSTEAMEKECRKRRNHITSTTTEVDVEVIDLMTPSPSCRAGSSMKRRRVSEFIDLTMSPNFIES
>AT2G30350.1
MREKRGNRKALDPVGEDGVTGKDGKGFFACYLLTSLSPRHKGQTYIGFTVNPRRRIRQHNGEITSGAWRTKKKRPWEMVLCIYGFPTNVSALQFEWAWQHPRESVAVREAAAAFKSFSGVASKIKLVYTMLNLPAWNSLNLTVNYFSSKYAHHGGKSPSLPLHMKVQVCAMEDLQYFTKVDDSSQPEDEESPEVNEEDDDDDDDDSSNLSQPGNSNTSSSDDRHFEKAKEPVTVFDEEDRLANFSGFGLLDEEETVEDEVSHITVGSIRATEKEPETVFNDRLASFTCFGLVEIVEDEVSHGTIGSTEAMEKECRKRRNHITSTTTEVDVEVIDLMTPSPSCRAGSSMKRRRVSEFIDLTMSPNFIES