Gene Details:
- Gene ID: AT2G30340
- Gene Symbol: LBD13
- Gene Name: LOB domain-containing protein 13
- Description: LOB domain-containing protein 13;(source:Araport11)
- TAIR Accession: locus:2065769
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
Gene Ontology:
- GO:0045893 — acts upstream of or within — positive regulation of DNA-templated transcription
- GO:0005515 — enables — protein binding
- GO:0005634 — located in — nucleus
- GO:0010311 — acts upstream of or within — lateral root formation
Function-related keywords:
Literature:
- The lateral organ boundaries gene defines a novel, plant-specific gene family. DOI: 10.1104/pp.010926 ; PMID: 12068116
- The ASYMMETRIC LEAVES2 gene of Arabidopsis thaliana, required for formation of a symmetric flat leaf lamina, encodes a member of a novel family of proteins characterized by cysteine repeats and a leucine zipper. DOI: 10.1093/pcp/pcf077 ; PMID: 12040093
- Characterization of genes in the ASYMMETRIC LEAVES2/LATERAL ORGAN BOUNDARIES (AS2/LOB) family in Arabidopsis thaliana, and functional and molecular comparisons between AS2 and other family members. DOI: 10.1111/j.1365-313X.2009.03797.x ; PMID: 19154202
- LBD13 positively regulates lateral root formation in Arabidopsis. DOI: 10.1007/s00425-018-03087-x ; PMID: 30627888
- Membrane proteomic analysis of Arabidopsis thaliana using alternative solubilization techniques. DOI: 10.1021/pr060525b ; PMID: 17432890
Sequences:
cDNA Sequence
- >AT2G30340.2
CCGATACTACTTATGATCTGTTCCAAATCTCGAGCTTACTCATAACTCGAATATTGATAATTAATACCTTAACGTACAAGAGCAGGACAGTAAGACTTCTTTAAACATATAGTATACAATATAATTAAGTATAGAAGTCTATAGATTTTCCCTTTTAAATAAAGAAAGATCATTTAATTCACCCTAATGACTCTCCTTATTAAAGAAACTCTTCTTCTTCTTCCTTGCTTCTCTTCCTCCTCCTCCTCCATTGATACTCTAAAATAAACTTATAAATAGCATGCGTGAATGTCCCGAGAAAGGTAAAACTAAATCAACATATATACATCTATTTACGATCTTTTTGATTGATAAATCAAATCGGTGGTGGTGAAAATGATTGGAAACAACAGGGAAGGATTTGGAGAGTACTACGAGACCGTCAAGAAGATAAAGAAAGATCCAGCCTTCGAGACAACGACGGATCATGCCGTGATGGGAATCAGGAGACATGTGGCGGTGCCTCCGGGGACAACGTTGAACACCGTAACACCATGCGCCGCTTGTAAGCTCCTCCGCCGTCGTTGTGCGGAGGAGTGTCCTTTCTCGCCTTACTTCTCGCCGCATGAACCTCACAAGTTCGCTGCCGTTCATAAAGTCTTTGGTGCAAGCAACGTCTCCAAGATGCTTCTGGAAGTGGGAGAGAGCCAAAGAGGAGACGCAGCAAATAGTTTAGTATACGAAGCAAACCTAAGACTTAGAGATCCAATCTACGGTTGCATGGGAGCAATCTCAGCTCTTCAACACCACATTCAGTCTCTTCAATCCGAACTCACGACCGTCCGTACGGAAATCCTACGCCACAAATACCAAGAAGCCACCACCATCACTTCTCTCCAAAACAACTTCAACAGCACTACAACAACTTCATCAGTGAGTTGTGATCAGCATGCTCTCGCCTCGGCGATTCTCCTCCCACCACCACCGCCACCACCTCCTACTCCACGACCACCAAGGTTGTTGTCCTCTCAGCCAGCTCCACCGCCTACGCCACCCGTTTCTTTGCCATCTCCGTCCATGGTTGTGTCGTCCTCTTCATCTTCTAATTCATCTGCCACCAATTCTATGTATAATCCTCCTCCATCTTCGACGGCTGGATATAGCAATTCTCTGTCCAGTGATAATAATGTTCATTACTTTGATTAAATCAGAATTCTGTGTTCCTTAATTTTTTTAAAATACTATTATAGCCCTTATTATAAGCTACGAGATTGAATGGTGATCCATGTTAAAGATAGGGTTTTCAACTTTTGATTTATTTTATTTTTCATATTGATTAA - >AT2G30340.1
CCGATACTACTTATGATCTGTTCCAAATCTCGAGCTTACTCATAACTCGAATATTGATAATTAATACCTTAACGTACAAGAGCAGGACAGTAAGACTTCTTTAAACATATAGTATACAATATAATTAAGTATAGAAGTCTATAGATTTTCCCTTTTAAATAAAGAAAGATCATTTAATTCACCCTAATGACTCTCCTTATTAAAGAAACTCTTCTTCTTCTTCCTTGCTTCTCTTCCTCCTCCTCCTCCATTGATACTCTAAAATAAACTTATAAATAGCATGCGTGAATGTCCCGAGAAAGGTAAAACTAAATCAACATATATACATCTATTTACGATCTTTTTGATTGATAAATCAAATCGGTGGTGGTGAAAATGATTGGAAACAACAGGGAAGGATTTGGAGAGTACTACGAGACCGTCAAGAAGATAAAGAAAGATCCAGCCTTCGAGACAACGACGGATCATGCCGTGATGGGAATCAGGAGACATGTGGCGGTGCCTCCGGGGACAACGTTGAACACCGTAACACCATGCGCCGCTTGTAAGCTCCTCCGCCGTCGTTGTGCGGAGGAGTGTCCTTTCTCGCCTTACTTCTCGCCGCATGAACCTCACAAGTTCGCTGCCGTTCATAAAGTCTTTGGTGCAAGCAACGTCTCCAAGATGCTTCTGGAAGTGGGAGAGAGCCAAAGAGGAGACGCAGCAAATAGTTTAGTATACGAAGCAAACCTAAGACTTAGAGATCCAATCTACGGTTGCATGGGAGCAATCTCAGCTCTTCAACACCACATTCAGTCTCTTCAATCCGAACTCACGACCGTCCGTACGGAAATCCTACGCCACAAATACCAAGAAGCCACCACCATCACTTCTCTCCAAAACAACTTCAACAGCACTACAACAACTTCATCAGTGAGTTGTGATCAGCATGCTCTCGCCTCGGCGATTCTCCTCCCACCACCACCGCCACCACCTCCTACTCCACGACCACCAAGGTTGTTGTCCTCTCAGCCAGCTCCACCGCCTACGCCACCCGTTTCTTTGCCATCTCCGTCCATGGTTGTGTCGTCCTCTTCATCTTCTAATTCATCTGCCACCAATTCTATGTATAATCCTCCTCCATCTTCGACGGCTGGATATAGCAATTCTCTGTCCAGTGATAATAATGTTCATTACTTTGATTAAATCAGAATTCTGTGTTCCTTAATTTTTTTAAAATACTATTATAGCCCTTATTATAAGCTACGAGATTGAATGGTGATCCATGTTAAAGATAGGGTTTTCAACTTTTGATTTATTTTATTTTTCATATTGATTAA
CDS Sequence
- >AT2G30340.2
ATGATTGGAAACAACAGGGAAGGATTTGGAGAGTACTACGAGACCGTCAAGAAGATAAAGAAAGATCCAGCCTTCGAGACAACGACGGATCATGCCGTGATGGGAATCAGGAGACATGTGGCGGTGCCTCCGGGGACAACGTTGAACACCGTAACACCATGCGCCGCTTGTAAGCTCCTCCGCCGTCGTTGTGCGGAGGAGTGTCCTTTCTCGCCTTACTTCTCGCCGCATGAACCTCACAAGTTCGCTGCCGTTCATAAAGTCTTTGGTGCAAGCAACGTCTCCAAGATGCTTCTGGAAGTGGGAGAGAGCCAAAGAGGAGACGCAGCAAATAGTTTAGTATACGAAGCAAACCTAAGACTTAGAGATCCAATCTACGGTTGCATGGGAGCAATCTCAGCTCTTCAACACCACATTCAGTCTCTTCAATCCGAACTCACGACCGTCCGTACGGAAATCCTACGCCACAAATACCAAGAAGCCACCACCATCACTTCTCTCCAAAACAACTTCAACAGCACTACAACAACTTCATCAGTGAGTTGTGATCAGCATGCTCTCGCCTCGGCGATTCTCCTCCCACCACCACCGCCACCACCTCCTACTCCACGACCACCAAGGTTGTTGTCCTCTCAGCCAGCTCCACCGCCTACGCCACCCGTTTCTTTGCCATCTCCGTCCATGGTTGTGTCGTCCTCTTCATCTTCTAATTCATCTGCCACCAATTCTATGTATAATCCTCCTCCATCTTCGACGGCTGGATATAGCAATTCTCTGTCCAGTGATAATAATGTTCATTACTTTGATTAA - >AT2G30340.1
ATGATTGGAAACAACAGGGAAGGATTTGGAGAGTACTACGAGACCGTCAAGAAGATAAAGAAAGATCCAGCCTTCGAGACAACGACGGATCATGCCGTGATGGGAATCAGGAGACATGTGGCGGTGCCTCCGGGGACAACGTTGAACACCGTAACACCATGCGCCGCTTGTAAGCTCCTCCGCCGTCGTTGTGCGGAGGAGTGTCCTTTCTCGCCTTACTTCTCGCCGCATGAACCTCACAAGTTCGCTGCCGTTCATAAAGTCTTTGGTGCAAGCAACGTCTCCAAGATGCTTCTGGAAGTGGGAGAGAGCCAAAGAGGAGACGCAGCAAATAGTTTAGTATACGAAGCAAACCTAAGACTTAGAGATCCAATCTACGGTTGCATGGGAGCAATCTCAGCTCTTCAACACCACATTCAGTCTCTTCAATCCGAACTCACGACCGTCCGTACGGAAATCCTACGCCACAAATACCAAGAAGCCACCACCATCACTTCTCTCCAAAACAACTTCAACAGCACTACAACAACTTCATCAGTGAGTTGTGATCAGCATGCTCTCGCCTCGGCGATTCTCCTCCCACCACCACCGCCACCACCTCCTACTCCACGACCACCAAGGTTGTTGTCCTCTCAGCCAGCTCCACCGCCTACGCCACCCGTTTCTTTGCCATCTCCGTCCATGGTTGTGTCGTCCTCTTCATCTTCTAATTCATCTGCCACCAATTCTATGTATAATCCTCCTCCATCTTCGACGGCTGGATATAGCAATTCTCTGTCCAGTGATAATAATGTTCATTACTTTGATTAA
Protein Sequence
- >AT2G30340.2
MIGNNREGFGEYYETVKKIKKDPAFETTTDHAVMGIRRHVAVPPGTTLNTVTPCAACKLLRRRCAEECPFSPYFSPHEPHKFAAVHKVFGASNVSKMLLEVGESQRGDAANSLVYEANLRLRDPIYGCMGAISALQHHIQSLQSELTTVRTEILRHKYQEATTITSLQNNFNSTTTTSSVSCDQHALASAILLPPPPPPPPTPRPPRLLSSQPAPPPTPPVSLPSPSMVVSSSSSSNSSATNSMYNPPPSSTAGYSNSLSSDNNVHYFD - >AT2G30340.1
MIGNNREGFGEYYETVKKIKKDPAFETTTDHAVMGIRRHVAVPPGTTLNTVTPCAACKLLRRRCAEECPFSPYFSPHEPHKFAAVHKVFGASNVSKMLLEVGESQRGDAANSLVYEANLRLRDPIYGCMGAISALQHHIQSLQSELTTVRTEILRHKYQEATTITSLQNNFNSTTTTSSVSCDQHALASAILLPPPPPPPPTPRPPRLLSSQPAPPPTPPVSLPSPSMVVSSSSSSNSSATNSMYNPPPSSTAGYSNSLSSDNNVHYFD