Information report for AT2G30340
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- GO:0045893 — acts upstream of or within — positive regulation of DNA-templated transcription
- GO:0005515 — enables — protein binding
- GO:0005634 — located in — nucleus
- GO:0010311 — acts upstream of or within — lateral root formation
Functional Keywords
Literature and News
- The lateral organ boundaries gene defines a novel, plant-specific gene family. DOI: 10.1104/pp.010926 ; PMID: 12068116
- The ASYMMETRIC LEAVES2 gene of Arabidopsis thaliana, required for formation of a symmetric flat leaf lamina, encodes a member of a novel family of proteins characterized by cysteine repeats and a leucine zipper. DOI: 10.1093/pcp/pcf077 ; PMID: 12040093
- Characterization of genes in the ASYMMETRIC LEAVES2/LATERAL ORGAN BOUNDARIES (AS2/LOB) family in Arabidopsis thaliana, and functional and molecular comparisons between AS2 and other family members. DOI: 10.1111/j.1365-313X.2009.03797.x ; PMID: 19154202
- LBD13 positively regulates lateral root formation in Arabidopsis. DOI: 10.1007/s00425-018-03087-x ; PMID: 30627888
- Membrane proteomic analysis of Arabidopsis thaliana using alternative solubilization techniques. DOI: 10.1021/pr060525b ; PMID: 17432890
Gene Resources
- UniProt: A0A384LQ09
- EMBL: CACRSJ010000105, CACSHJ010000088, LUHQ01000002
- AlphaFoldDB: A0A384LQ09
- EnsemblPlants: AT2G30340.2
- Gramene: AT2G30340.2
- ExpressionAtlas: AT2G30340
- InterPro: IPR004883
- PANTHER: PTHR31301, PTHR31301:SF78
- PROSITE: PS50891
- OrthoDB: A0A384LQ09
- SWISS-MODEL: A0A384LQ09
Homologs
- Brassica napus GSBRNA2T00043447001, GSBRNA2T00011906001, GSBRNA2T00113417001, GSBRNA2T00048529001
- Brassica oleracea XP_013634930.1, XP_013634737.1, XP_013634738.1
- Brassica rapa XP_009144310.1, XP_009141058.1, XP_009141059.1
- Raphanus raphanistrum RrC21462_p1, RrC22610_p1
- Salvia miltiorrhiza SMil_00000702-RA_Salv
Sequences
cDNA Sequence
- >AT2G30340.2
CCGATACTACTTATGATCTGTTCCAAATCTCGAGCTTACTCATAACTCGAATATTGATAATTAATACCTTAACGTACAAGAGCAGGACAGTAAGACTTCTTTAAACATATAGTATACAATATAATTAAGTATAGAAGTCTATAGATTTTCCCTTTTAAATAAAGAAAGATCATTTAATTCACCCTAATGACTCTCCTTATTAAAGAAACTCTTCTTCTTCTTCCTTGCTTCTCTTCCTCCTCCTCCTCCATTGATACTCTAAAATAAACTTATAAATAGCATGCGTGAATGTCCCGAGAAAGGTAAAACTAAATCAACATATATACATCTATTTACGATCTTTTTGATTGATAAATCAAATCGGTGGTGGTGAAAATGATTGGAAACAACAGGGAAGGATTTGGAGAGTACTACGAGACCGTCAAGAAGATAAAGAAAGATCCAGCCTTCGAGACAACGACGGATCATGCCGTGATGGGAATCAGGAGACATGTGGCGGTGCCTCCGGGGACAACGTTGAACACCGTAACACCATGCGCCGCTTGTAAGCTCCTCCGCCGTCGTTGTGCGGAGGAGTGTCCTTTCTCGCCTTACTTCTCGCCGCATGAACCTCACAAGTTCGCTGCCGTTCATAAAGTCTTTGGTGCAAGCAACGTCTCCAAGATGCTTCTGGAAGTGGGAGAGAGCCAAAGAGGAGACGCAGCAAATAGTTTAGTATACGAAGCAAACCTAAGACTTAGAGATCCAATCTACGGTTGCATGGGAGCAATCTCAGCTCTTCAACACCACATTCAGTCTCTTCAATCCGAACTCACGACCGTCCGTACGGAAATCCTACGCCACAAATACCAAGAAGCCACCACCATCACTTCTCTCCAAAACAACTTCAACAGCACTACAACAACTTCATCAGTGAGTTGTGATCAGCATGCTCTCGCCTCGGCGATTCTCCTCCCACCACCACCGCCACCACCTCCTACTCCACGACCACCAAGGTTGTTGTCCTCTCAGCCAGCTCCACCGCCTACGCCACCCGTTTCTTTGCCATCTCCGTCCATGGTTGTGTCGTCCTCTTCATCTTCTAATTCATCTGCCACCAATTCTATGTATAATCCTCCTCCATCTTCGACGGCTGGATATAGCAATTCTCTGTCCAGTGATAATAATGTTCATTACTTTGATTAAATCAGAATTCTGTGTTCCTTAATTTTTTTAAAATACTATTATAGCCCTTATTATAAGCTACGAGATTGAATGGTGATCCATGTTAAAGATAGGGTTTTCAACTTTTGATTTATTTTATTTTTCATATTGATTAA - >AT2G30340.1
CCGATACTACTTATGATCTGTTCCAAATCTCGAGCTTACTCATAACTCGAATATTGATAATTAATACCTTAACGTACAAGAGCAGGACAGTAAGACTTCTTTAAACATATAGTATACAATATAATTAAGTATAGAAGTCTATAGATTTTCCCTTTTAAATAAAGAAAGATCATTTAATTCACCCTAATGACTCTCCTTATTAAAGAAACTCTTCTTCTTCTTCCTTGCTTCTCTTCCTCCTCCTCCTCCATTGATACTCTAAAATAAACTTATAAATAGCATGCGTGAATGTCCCGAGAAAGGTAAAACTAAATCAACATATATACATCTATTTACGATCTTTTTGATTGATAAATCAAATCGGTGGTGGTGAAAATGATTGGAAACAACAGGGAAGGATTTGGAGAGTACTACGAGACCGTCAAGAAGATAAAGAAAGATCCAGCCTTCGAGACAACGACGGATCATGCCGTGATGGGAATCAGGAGACATGTGGCGGTGCCTCCGGGGACAACGTTGAACACCGTAACACCATGCGCCGCTTGTAAGCTCCTCCGCCGTCGTTGTGCGGAGGAGTGTCCTTTCTCGCCTTACTTCTCGCCGCATGAACCTCACAAGTTCGCTGCCGTTCATAAAGTCTTTGGTGCAAGCAACGTCTCCAAGATGCTTCTGGAAGTGGGAGAGAGCCAAAGAGGAGACGCAGCAAATAGTTTAGTATACGAAGCAAACCTAAGACTTAGAGATCCAATCTACGGTTGCATGGGAGCAATCTCAGCTCTTCAACACCACATTCAGTCTCTTCAATCCGAACTCACGACCGTCCGTACGGAAATCCTACGCCACAAATACCAAGAAGCCACCACCATCACTTCTCTCCAAAACAACTTCAACAGCACTACAACAACTTCATCAGTGAGTTGTGATCAGCATGCTCTCGCCTCGGCGATTCTCCTCCCACCACCACCGCCACCACCTCCTACTCCACGACCACCAAGGTTGTTGTCCTCTCAGCCAGCTCCACCGCCTACGCCACCCGTTTCTTTGCCATCTCCGTCCATGGTTGTGTCGTCCTCTTCATCTTCTAATTCATCTGCCACCAATTCTATGTATAATCCTCCTCCATCTTCGACGGCTGGATATAGCAATTCTCTGTCCAGTGATAATAATGTTCATTACTTTGATTAAATCAGAATTCTGTGTTCCTTAATTTTTTTAAAATACTATTATAGCCCTTATTATAAGCTACGAGATTGAATGGTGATCCATGTTAAAGATAGGGTTTTCAACTTTTGATTTATTTTATTTTTCATATTGATTAA
CDS Sequence
- >AT2G30340.2
ATGATTGGAAACAACAGGGAAGGATTTGGAGAGTACTACGAGACCGTCAAGAAGATAAAGAAAGATCCAGCCTTCGAGACAACGACGGATCATGCCGTGATGGGAATCAGGAGACATGTGGCGGTGCCTCCGGGGACAACGTTGAACACCGTAACACCATGCGCCGCTTGTAAGCTCCTCCGCCGTCGTTGTGCGGAGGAGTGTCCTTTCTCGCCTTACTTCTCGCCGCATGAACCTCACAAGTTCGCTGCCGTTCATAAAGTCTTTGGTGCAAGCAACGTCTCCAAGATGCTTCTGGAAGTGGGAGAGAGCCAAAGAGGAGACGCAGCAAATAGTTTAGTATACGAAGCAAACCTAAGACTTAGAGATCCAATCTACGGTTGCATGGGAGCAATCTCAGCTCTTCAACACCACATTCAGTCTCTTCAATCCGAACTCACGACCGTCCGTACGGAAATCCTACGCCACAAATACCAAGAAGCCACCACCATCACTTCTCTCCAAAACAACTTCAACAGCACTACAACAACTTCATCAGTGAGTTGTGATCAGCATGCTCTCGCCTCGGCGATTCTCCTCCCACCACCACCGCCACCACCTCCTACTCCACGACCACCAAGGTTGTTGTCCTCTCAGCCAGCTCCACCGCCTACGCCACCCGTTTCTTTGCCATCTCCGTCCATGGTTGTGTCGTCCTCTTCATCTTCTAATTCATCTGCCACCAATTCTATGTATAATCCTCCTCCATCTTCGACGGCTGGATATAGCAATTCTCTGTCCAGTGATAATAATGTTCATTACTTTGATTAA - >AT2G30340.1
ATGATTGGAAACAACAGGGAAGGATTTGGAGAGTACTACGAGACCGTCAAGAAGATAAAGAAAGATCCAGCCTTCGAGACAACGACGGATCATGCCGTGATGGGAATCAGGAGACATGTGGCGGTGCCTCCGGGGACAACGTTGAACACCGTAACACCATGCGCCGCTTGTAAGCTCCTCCGCCGTCGTTGTGCGGAGGAGTGTCCTTTCTCGCCTTACTTCTCGCCGCATGAACCTCACAAGTTCGCTGCCGTTCATAAAGTCTTTGGTGCAAGCAACGTCTCCAAGATGCTTCTGGAAGTGGGAGAGAGCCAAAGAGGAGACGCAGCAAATAGTTTAGTATACGAAGCAAACCTAAGACTTAGAGATCCAATCTACGGTTGCATGGGAGCAATCTCAGCTCTTCAACACCACATTCAGTCTCTTCAATCCGAACTCACGACCGTCCGTACGGAAATCCTACGCCACAAATACCAAGAAGCCACCACCATCACTTCTCTCCAAAACAACTTCAACAGCACTACAACAACTTCATCAGTGAGTTGTGATCAGCATGCTCTCGCCTCGGCGATTCTCCTCCCACCACCACCGCCACCACCTCCTACTCCACGACCACCAAGGTTGTTGTCCTCTCAGCCAGCTCCACCGCCTACGCCACCCGTTTCTTTGCCATCTCCGTCCATGGTTGTGTCGTCCTCTTCATCTTCTAATTCATCTGCCACCAATTCTATGTATAATCCTCCTCCATCTTCGACGGCTGGATATAGCAATTCTCTGTCCAGTGATAATAATGTTCATTACTTTGATTAA
Protein Sequence
- >AT2G30340.2
MIGNNREGFGEYYETVKKIKKDPAFETTTDHAVMGIRRHVAVPPGTTLNTVTPCAACKLLRRRCAEECPFSPYFSPHEPHKFAAVHKVFGASNVSKMLLEVGESQRGDAANSLVYEANLRLRDPIYGCMGAISALQHHIQSLQSELTTVRTEILRHKYQEATTITSLQNNFNSTTTTSSVSCDQHALASAILLPPPPPPPPTPRPPRLLSSQPAPPPTPPVSLPSPSMVVSSSSSSNSSATNSMYNPPPSSTAGYSNSLSSDNNVHYFD - >AT2G30340.1
MIGNNREGFGEYYETVKKIKKDPAFETTTDHAVMGIRRHVAVPPGTTLNTVTPCAACKLLRRRCAEECPFSPYFSPHEPHKFAAVHKVFGASNVSKMLLEVGESQRGDAANSLVYEANLRLRDPIYGCMGAISALQHHIQSLQSELTTVRTEILRHKYQEATTITSLQNNFNSTTTTSSVSCDQHALASAILLPPPPPPPPTPRPPRLLSSQPAPPPTPPVSLPSPSMVVSSSSSSNSSATNSMYNPPPSSTAGYSNSLSSDNNVHYFD