Information report for AT2G30330
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- GO:0016197 — acts upstream of or within — endosomal transport
- GO:0048364 — involved in — root development
- GO:0031083 — part of — BLOC-1 complex
- GO:0005768 — located in — endosome
- GO:0045324 — involved in — late endosome to vacuole transport
- GO:0016197 — involved in — endosomal transport
- GO:0005515 — enables — protein binding
- GO:0005739 — located in — mitochondrion
- GO:0005634 — located in — nucleus
- blos1 rna1 — Longer primary roots and increased number of lateral roots as compared to WT. Increased levels of PIN1 and PIN2 proteins on the plasma membrane.
Functional Keywords
Literature and News
- BLOS1, a putative BLOC-1 subunit, interacts with SNX1 and modulates root growth in Arabidopsis. DOI: 10.1242/jcs.069732 ; PMID: 20971704
- Differential Gene Expression and Protein Phosphorylation as Factors Regulating the State of the Arabidopsis SNX1 Protein Complexes in Response to Environmental Stimuli. DOI: 10.3389/fpls.2016.01456 ; PMID: 27725825
Gene Resources
- UniProt: A0A178VYH2
- EMBL: CACRSJ010000105, CACSHJ010000088, LR881467
- AlphaFoldDB: A0A178VYH2
- EnsemblPlants: AT2G30330.1
- Gramene: AT2G30330.1
- KEGG: ath:AT2G30330
- Orthologous matrix: WMKIMEY
- ExpressionAtlas: AT2G30330
- InterPro: IPR009395
- PANTHER: PTHR13073, PTHR13073:SF0
- OrthoDB: A0A178VYH2
- SWISS-MODEL: A0A178VYH2
Sequences
cDNA Sequence
- >AT2G30330.1
AAAATAAATAAATATGATTTTAAAGATAATTAGTAGTATTTAAGACGAAATGCGTGACGTTTCATGGAATCAAAACGGCGCGTAGTGCAACAAGTATATGGTTAACTGATACGCCACGAAATAGTCGGGGATAACTAATTCAATCGTTACCGAACCAATTCACCGGCGAGAGAGAATGAATACGCCGATGTCACTCTCGGCGGCGCGTGGCCGTATGCTACCTTTTTTAGAGAAGGAGAAATCAGAAGAAGAGTCTGAAACTCTGGAATCGAGTCTCTTACAGCTAATCGACGACAATCGTCGATCATCGTTACAGCTCCGGGAAAAAACCGAGAGATCGAGAAAGGAAGCAATCAGGCACGCGGCGAGAACGGCGGATCTGCTAGTGAAGGCGGTGAACGGAGGAGTAGAGGAATGTTTCGTTAACGAGAAACGGATTGAGTCGGAGATTAGGAATCTTGCCATTACGGTGGCGAAATTCGGCAAACAAACGGATCAGTGGCTTGCCGTCACTCACGCCGTTAATAGCGCCGTAAAGGAAATTGGAGATTTTGAGAATTGGATGAAGACGATGGAGTTTGATTGTAAGAAAATCACTGCTGCAATTCGAAACATTCATGAAGATCAACAATAAGAGCAAGTTATTGTGATTCATTCACTTGTTGGTGTTTTTTGATAGAGAGTTCTTATAGCCATTGATGTTATATACCACTTCTTTAGTGTTTCTCTGTTTGAGTAGTGGAAATGATTGGATCAAAAGAGTTTGATAGTCTACTCAAAATAAAAACATGAACTACTCTTTTGGCCTTGTTGGGTTGTCTTTGTGAGTGTTACAAGATATTTTCTTCGTACTTCTCTTCTTCATAGGCTTGTTCTTTAGCCTGAGTAGGATTCATCATGTGCCTTATTATCAAGACAGACTCTCTCTTTTTGACCTCTTTTGCTGAGTGAGTGCGGTTAGGCTGATCTAGCTCGTCTGGTATCATACTCCCGACCTATGCCATAACATTCTTTTGTTT - >AT2G30330.2
AAAATAAATAAATATGATTTTAAAGATAATTAGTAGTATTTAAGACGAAATGCGTGACGTTTCATGGAATCAAAACGGCGCGTAGTGCAACAAGTATATGGTTAACTGATACGCCACGAAATAGTCGGGGATAACTAATTCAATCGTTACCGAACCAATTCACCGGCGAGAGAGAATGAATACGCCGATGTCACTCTCGGCGGCGCGTGGCCGTATGCTACCTTTTTTAGAGAAGGAGAAATCAGAAGAAGAGTCTGAAACTCTGGAATCGAGTCTCTTACAGCTAATCGACGACAATCGTCGATCATCGTTACAGCTCCGGGAAAAAACCGAGAGATCGAGAAAGGAAGCAATCAGGCACGCGGCGAGAACGGCGGATCTGCTAGTGAAGGCGGTGAACGGAGGAGTAGAGGAATGTTTCGTTAACGAGAAACGGATTGAGTCGGAGATTAGGAATCTTGCCATTACGGTGGCGAAATTCGGCAAACAAACGGATCAGTGGCTTGCCGTCACTCACGCCGTTAATAGCGCCGTAAAGGAAATTGGAGATTTTGAGAATTGGATGAAGACGATGGAGTTTGATTGTAAGAAAATCACTGCTGCAATTCGAAACATTCATGAAGATCAACAATAAGAGCAAGTTATTGTGATTCATTCACTTGTTGGTGTTTTTTGATAGAGAGTTCTTATAGCCATTGATGTTATATACCACTTCTTTAGTGTTTCTCTGTTTGAGTAGTGGAAATGATTGGATCAAAAGAGTTTGATAGTCTACTCAAAATAAAAACATGAACTACTCTTTTGGCCTTGTTGGGTTGTCTTTGTGAGTGTTACAAGATATTTTCTTCGTACTTCTCTTCTTCATAGGCTTGTTCTTTAGCCTGAGTAGGATTCATCATGTGCCTTATTATCAAGACAGACTCTCTCTTTTTGACCTCTTTTGCTGAGTGAGTGCGGTTAGGCTGATCTAGCTCGTCTGGTATCATACTCCCGACCTATGCCATAACATTCTTTTGTTT
CDS Sequence
- >AT2G30330.1
ATGAATACGCCGATGTCACTCTCGGCGGCGCGTGGCCGTATGCTACCTTTTTTAGAGAAGGAGAAATCAGAAGAAGAGTCTGAAACTCTGGAATCGAGTCTCTTACAGCTAATCGACGACAATCGTCGATCATCGTTACAGCTCCGGGAAAAAACCGAGAGATCGAGAAAGGAAGCAATCAGGCACGCGGCGAGAACGGCGGATCTGCTAGTGAAGGCGGTGAACGGAGGAGTAGAGGAATGTTTCGTTAACGAGAAACGGATTGAGTCGGAGATTAGGAATCTTGCCATTACGGTGGCGAAATTCGGCAAACAAACGGATCAGTGGCTTGCCGTCACTCACGCCGTTAATAGCGCCGTAAAGGAAATTGGAGATTTTGAGAATTGGATGAAGACGATGGAGTTTGATTGTAAGAAAATCACTGCTGCAATTCGAAACATTCATGAAGATCAACAATAA - >AT2G30330.2
ATGAATACGCCGATGTCACTCTCGGCGGCGCGTGGCCGTATGCTACCTTTTTTAGAGAAGGAGAAATCAGAAGAAGAGTCTGAAACTCTGGAATCGAGTCTCTTACAGCTAATCGACGACAATCGTCGATCATCGTTACAGCTCCGGGAAAAAACCGAGAGATCGAGAAAGGAAGCAATCAGGCACGCGGCGAGAACGGCGGATCTGCTAGTGAAGGCGGTGAACGGAGGAGTAGAGGAATGTTTCGTTAACGAGAAACGGATTGAGTCGGAGATTAGGAATCTTGCCATTACGGTGGCGAAATTCGGCAAACAAACGGATCAGTGGCTTGCCGTCACTCACGCCGTTAATAGCGCCGTAAAGGAAATTGGAGATTTTGAGAATTGGATGAAGACGATGGAGTTTGATTGTAAGAAAATCACTGCTGCAATTCGAAACATTCATGAAGATCAACAATAA
Protein Sequence
- >AT2G30330.1
MNTPMSLSAARGRMLPFLEKEKSEEESETLESSLLQLIDDNRRSSLQLREKTERSRKEAIRHAARTADLLVKAVNGGVEECFVNEKRIESEIRNLAITVAKFGKQTDQWLAVTHAVNSAVKEIGDFENWMKTMEFDCKKITAAIRNIHEDQQ - >AT2G30330.2
MNTPMSLSAARGRMLPFLEKEKSEEESETLESSLLQLIDDNRRSSLQLREKTERSRKEAIRHAARTADLLVKAVNGGVEECFVNEKRIESEIRNLAITVAKFGKQTDQWLAVTHAVNSAVKEIGDFENWMKTMEFDCKKITAAIRNIHEDQQ