Information report for AT2G30320
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
- PO:0025195 — pollen tube cell — célula del tubo polínico (Spanish, exact), 花粉管細胞 (Japanese, exact)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- GO:0005634 — located in — nucleus
- GO:0009982 — enables — pseudouridine synthase activity
- GO:0031119 — involved in — tRNA pseudouridine synthesis
- GO:0005634 — is active in — nucleus
- GO:1990481 — involved in — mRNA pseudouridine synthesis
- GO:0003723 — enables — RNA binding
Functional Keywords
Literature and News
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- Mutations in SUPPRESSOR OF VARIEGATION1, a factor required for normal chloroplast translation, suppress var2-mediated leaf variegation in Arabidopsis. DOI: 10.1105/tpc.107.054965 ; PMID: 18599582
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Genome-Wide Identification and Expression Analysis of Pseudouridine Synthase Family in Arabidopsis and Maize. DOI: 10.3390/ijms23052680 ; PMID: 35269820
- Mutations in SUPPRESSOR OF VARIEGATION1, a factor required for normal chloroplast translation, suppress var2-mediated leaf variegation in Arabidopsis. DOI: 10.1105/tpc.107.054965 ; PMID: 18599582
Gene Resources
Sequences
cDNA Sequence
- >AT2G30320.1
ATATAACAAAACCGTGTTTTAAATTGACAAAACGGCACGTAGTTTGACAAAAGAAATCACCGGAGCTTTTATGTTAGCGCCGGTTCTAGAAACTTAGCCAAGTTTTATTTCTCATGGCAGTCTCGTTTCTACGAATTCCAATTCCATCGCGGGTCTTCTGGTACCCGACCCGACTTATTCGGGTCACACCAGCGTTATTACGATTCTCTTCCTCCGCCGCATTTCAGCCGTCTTCTACTTCACTCTCACCGCCTTCTTCCGACAACTTTCTCGCCGATAAATGGGAATCATATCGGAAGAAGAAGGTCGTCATTCGAATTGGATACGTGGGTACTGATTACAGAGGCTTACAGATTCAAAGAGACGACCCTTCTATCAAAACTATTGAGGGTGAGTTGGAAGTTGCTATATACAAGGCAGGTGGGATTAGAGATAGTAACTATGGTGATCTTCATAAGATTGGTTGGGCTAGAAGTAGTCGAACTGATAAAGGAGTTCATTCTTTGGCAACGTCAATATCGCTGAAAATGGAGATCCCTGAGACAGCGTGGAAGGATGATCCTCAAGGCACTGTTCTTGCTAAATGCATTAGCAAACACCTTCCTGAGAATATTAGAGTTTTCAGTGTTTTACCGTCAAATAGGAGATTTGATCCTCGAAGAGAGTGTACGCTACGGAAATATTCTTACCTCCTCCCTGTTGATGTTCTTGGGATCAAGAATAGCTTTACTTCAGATGAGATTGACTATCACATTACGGATTTCAACGAAATTTTAAAAGAATTTGAGGGTGAATATCCTTTCCATAACTATACACAGCGGTCACGGTACAGAAGGAAATCGGAACAAAAAATAAAGCAAAGAAACGGACGCCCTCCAAGAGAACCAAAATCAATCAAAGCATCAGAATCAGAGTTTAGAGAGGAGAACCACATAGAAATTGGAGAAGAAGAAGAAGAAAAAGAAGTGGATGGTGAATCTGATGAACATGTGGTTACTCCTGATTCTGATAATTCTCAGGTGTACAGTCGTGCAAAATGGCTGTACGAGCCAGATGAGACAGATAAGATTAGCGGTGCTCATTTCAGGAAAGTGTTTCGATGTCGTAGTGGAAAGCTAGAGAATTCACTTGGATTCGGCTTTGTGGAGATCTCCATATGGGGAGAATCATTCATGTTGCATCAGATACGGAAGATGATTGGAACGGCCGTGGCAGTGAAGAGAGAGCTGCTTCCTAGAGACATCATAAGACTATCTCTGAACAAGTTCACAAGAATTGTCTTGCCACTGGCTCCATCTGAAGTACTGATCCTGAGAGGAAACAGTTTCGAAGTGCGTAGATTGCCTGAGAGGCCGGGGATGGAAGCAACAGGTGAATCAGAAGAAGTGGAGAAGGAGATAGAGGAGTTTTACAGAGCAGTGATGGTTCCACAGGTGAGTATATTCCTGGATTCTGAGAAATCTCCATGGAAAGAGTGGGTGGATCATTTGGATAGGAATGATGGTTTGATAGACGAGGAATTGGAAGATGTAAGGAAAGGTTGGGAGGAGTGGAAAGCTGCGAAGCCATGGATGAATTTGAAGAAGACAGAAGATGATGAAGAAGCATTGAGTTCTGTTTCAGTACCTATTCATCAAGCTCTATGAGAGAGTCTAACATTAGTTGCATCTACGTTTTGTGCACCTTGATTGAATGTTTTATGATTAATTGTTTCACTTACATTGAATATGAGAAAGTTTTATGAGAAGCATCTAAAGTTTCTTACATTGTTATGATTCAGATTAAGCCAAGTCTCTCAGTTTAAACGCAATGTTAACATATTTGTTTTTACATTTTACCTTTTACCTTAGAAAAATAGGAATACT
CDS Sequence
- >AT2G30320.1
ATGGCAGTCTCGTTTCTACGAATTCCAATTCCATCGCGGGTCTTCTGGTACCCGACCCGACTTATTCGGGTCACACCAGCGTTATTACGATTCTCTTCCTCCGCCGCATTTCAGCCGTCTTCTACTTCACTCTCACCGCCTTCTTCCGACAACTTTCTCGCCGATAAATGGGAATCATATCGGAAGAAGAAGGTCGTCATTCGAATTGGATACGTGGGTACTGATTACAGAGGCTTACAGATTCAAAGAGACGACCCTTCTATCAAAACTATTGAGGGTGAGTTGGAAGTTGCTATATACAAGGCAGGTGGGATTAGAGATAGTAACTATGGTGATCTTCATAAGATTGGTTGGGCTAGAAGTAGTCGAACTGATAAAGGAGTTCATTCTTTGGCAACGTCAATATCGCTGAAAATGGAGATCCCTGAGACAGCGTGGAAGGATGATCCTCAAGGCACTGTTCTTGCTAAATGCATTAGCAAACACCTTCCTGAGAATATTAGAGTTTTCAGTGTTTTACCGTCAAATAGGAGATTTGATCCTCGAAGAGAGTGTACGCTACGGAAATATTCTTACCTCCTCCCTGTTGATGTTCTTGGGATCAAGAATAGCTTTACTTCAGATGAGATTGACTATCACATTACGGATTTCAACGAAATTTTAAAAGAATTTGAGGGTGAATATCCTTTCCATAACTATACACAGCGGTCACGGTACAGAAGGAAATCGGAACAAAAAATAAAGCAAAGAAACGGACGCCCTCCAAGAGAACCAAAATCAATCAAAGCATCAGAATCAGAGTTTAGAGAGGAGAACCACATAGAAATTGGAGAAGAAGAAGAAGAAAAAGAAGTGGATGGTGAATCTGATGAACATGTGGTTACTCCTGATTCTGATAATTCTCAGGTGTACAGTCGTGCAAAATGGCTGTACGAGCCAGATGAGACAGATAAGATTAGCGGTGCTCATTTCAGGAAAGTGTTTCGATGTCGTAGTGGAAAGCTAGAGAATTCACTTGGATTCGGCTTTGTGGAGATCTCCATATGGGGAGAATCATTCATGTTGCATCAGATACGGAAGATGATTGGAACGGCCGTGGCAGTGAAGAGAGAGCTGCTTCCTAGAGACATCATAAGACTATCTCTGAACAAGTTCACAAGAATTGTCTTGCCACTGGCTCCATCTGAAGTACTGATCCTGAGAGGAAACAGTTTCGAAGTGCGTAGATTGCCTGAGAGGCCGGGGATGGAAGCAACAGGTGAATCAGAAGAAGTGGAGAAGGAGATAGAGGAGTTTTACAGAGCAGTGATGGTTCCACAGGTGAGTATATTCCTGGATTCTGAGAAATCTCCATGGAAAGAGTGGGTGGATCATTTGGATAGGAATGATGGTTTGATAGACGAGGAATTGGAAGATGTAAGGAAAGGTTGGGAGGAGTGGAAAGCTGCGAAGCCATGGATGAATTTGAAGAAGACAGAAGATGATGAAGAAGCATTGAGTTCTGTTTCAGTACCTATTCATCAAGCTCTATGA
Protein Sequence
- >AT2G30320.1
MAVSFLRIPIPSRVFWYPTRLIRVTPALLRFSSSAAFQPSSTSLSPPSSDNFLADKWESYRKKKVVIRIGYVGTDYRGLQIQRDDPSIKTIEGELEVAIYKAGGIRDSNYGDLHKIGWARSSRTDKGVHSLATSISLKMEIPETAWKDDPQGTVLAKCISKHLPENIRVFSVLPSNRRFDPRRECTLRKYSYLLPVDVLGIKNSFTSDEIDYHITDFNEILKEFEGEYPFHNYTQRSRYRRKSEQKIKQRNGRPPREPKSIKASESEFREENHIEIGEEEEEKEVDGESDEHVVTPDSDNSQVYSRAKWLYEPDETDKISGAHFRKVFRCRSGKLENSLGFGFVEISIWGESFMLHQIRKMIGTAVAVKRELLPRDIIRLSLNKFTRIVLPLAPSEVLILRGNSFEVRRLPERPGMEATGESEEVEKEIEEFYRAVMVPQVSIFLDSEKSPWKEWVDHLDRNDGLIDEELEDVRKGWEEWKAAKPWMNLKKTEDDEEALSSVSVPIHQAL