Information report for AT2G30250
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- GO:0003700 — enables — DNA-binding transcription factor activity
- GO:0005515 — enables — protein binding
- GO:0009651 — acts upstream of or within — response to salt stress
- GO:0006970 — acts upstream of or within — response to osmotic stress
- GO:0070370 — acts upstream of or within — cellular heat acclimation
- GO:0006355 — involved in — regulation of DNA-templated transcription
- GO:0034605 — acts upstream of or within — cellular response to heat
- GO:0005634 — located in — nucleus
- GO:0043565 — enables — sequence-specific DNA binding
- GO:0009409 — acts upstream of or within — response to cold
- SAIL_529B11 — WT phenotype. Root bending and root elongation assays under salt, osmotic and ABA treatments showed no significant difference compared to WT.
- wrky25-1; wrky33-1 — Double mutant roots were significantly shorter than WT toots when under salt-stress.
Functional Keywords
Literature and News
- The WRKY superfamily of plant transcription factors. DOI: 10.1016/s1360-1385(00)01600-9 ; PMID: 10785665
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- Genomic and physiological studies of early cryptochrome 1 action demonstrate roles for auxin and gibberellin in the control of hypocotyl growth by blue light. DOI: 10.1046/j.1365-313x.2003.01870.x ; PMID: 14535885
- High-throughput protein localization in Arabidopsis using Agrobacterium-mediated transient expression of GFP-ORF fusions. DOI: 10.1111/j.1365-313X.2004.02281.x ; PMID: 15610358
- The MAP kinase substrate MKS1 is a regulator of plant defense responses. DOI: 10.1038/sj.emboj.7600737 ; PMID: 15990873
- Functional analysis of Arabidopsis WRKY25 transcription factor in plant defense against Pseudomonas syringae. DOI: 10.1186/1471-2229-7-2 ; PMID: 17214894
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Functional characterization of Arabidopsis NaCl-inducible WRKY25 and WRKY33 transcription factors in abiotic stresses. DOI: 10.1007/s11103-008-9408-3 ; PMID: 18839316
- Nitric oxide modulates ozone-induced cell death, hormone biosynthesis and gene expression in Arabidopsis thaliana. DOI: 10.1111/j.1365-313X.2008.03756.x ; PMID: 19054359
- Functional analysis of an Arabidopsis transcription factor WRKY25 in heat stress. DOI: 10.1007/s00299-008-0666-y ; PMID: 19125253
- Arabidopsis thaliana WRKY25, WRKY26, and WRKY33 coordinate induction of plant thermotolerance. DOI: 10.1007/s00425-011-1375-2 ; PMID: 21336597
- Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. DOI: 10.1186/1471-2229-13-229 ; PMID: 24377444
- Characterization of the promoter and extended C-terminal domain of Arabidopsis WRKY33 and functional analysis of tomato WRKY33 homologues in plant stress responses. DOI: 10.1093/jxb/erv221 ; PMID: 25969555
- Nitric oxide responses in Arabidopsis hypocotyls are mediated by diverse phytohormone pathways. DOI: 10.1093/jxb/ery286 ; PMID: 30085082
- Genetic Loci Associated with Early Salt Stress Responses of Roots. DOI: 10.1016/j.isci.2019.10.043 ; PMID: 31707259
- Arabidopsis thaliana WRKY25 Transcription Factor Mediates Oxidative Stress Tolerance and Regulates Senescence in a Redox-Dependent Manner. DOI: 10.3389/fpls.2019.01734 ; PMID: 32038695
- Crosstalk between heterotrimeric G protein-coupled signaling pathways and WRKY transcription factors modulating plant responses to suboptimal micronutrient conditions. DOI: 10.1093/jxb/eraa108 ; PMID: 32107545
- 14-3-3 Proteins and Other Candidates form Protein-Protein Interactions with the Cytosolic C-terminal End of SOS1 Affecting Its Transport Activity. DOI: 10.3390/ijms21093334 ; PMID: 32397251
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis. DOI: 10.1093/molbev/msj051 ; PMID: 16280546
Gene Resources
- UniProt: A0A654EYX0
- EMBL: CACRSJ010000105
- AlphaFoldDB: A0A654EYX0
- EnsemblPlants: AT2G30250.1
- Gramene: AT2G30250.1
- KEGG: ath:AT2G30250
- Orthologous matrix: GVQDHQK
- ExpressionAtlas: AT2G30250
- InterPro: IPR003657, IPR036576, IPR044810
- PANTHER: PTHR31221, PTHR31221:SF229
- SUPFAM: SSF118290
- PROSITE: PS50811
- Gene3D: 2.20.25.80
- SWISS-MODEL: A0A654EYX0
Homologs
- Brassica napus GSBRNA2T00024537001, GSBRNA2T00142165001, GSBRNA2T00048520001, GSBRNA2T00105146001, GSBRNA2T00043455001
- Brassica oleracea XP_013625566.1, XP_013631142.1, XP_013633582.1
- Brassica rapa XP_009132720.1, XP_009144317.1, XP_009141053.1
- Raphanus raphanistrum RrC3134_p4
Sequences
cDNA Sequence
- >AT2G30250.1
ATTTTATAGAAATATTAAAATCAAAAATGATATTTAGGCCAAAGTAGAAAAAGACAAGAAGAGAGAGAAACAAAAAAAACCTTGCTCAATACGCCACCGTCGTCGTCTTTAACCCAATCTAAAAGCCTCTGTTCTTTTTTAGTTTTATCCTCTTTTTCATTTCAAGATCAATTTCATAAAAAAGTTTCCTTTTTTAGCGAATCCTCTGTTTTAGAAATCTTAAAGTTGTCTCCTTTATTAAAGACCATCATGTCTTCCACTTCTTTCACCGACCTTCTTGGTTCTTCCGGCGTTGACTGTTACGAAGATGATGAAGACTTGAGAGTTTCTGGGTCGAGTTTTGGTGGGTACTATCCAGAGAGAACCGGGTCTGGTTTACCTAAGTTCAAGACGGCTCAACCACCACCTCTTCCGATTTCACAATCTTCTCATAACTTCACTTTCTCCGATTACCTTGATTCTCCTCTGCTTCTCAGCTCCTCACACAGTTTGATATCTCCAACAACAGGAACGTTTCCATTGCAAGGCTTTAATGGAACAACAAACAATCACTCAGATTTTCCCTGGCAGCTACAATCTCAACCATCAAACGCTTCTTCTGCTTTGCAAGAAACATATGGTGTTCAAGATCACGAGAAGAAGCAGGAGATGATTCCTAATGAGATTGCAACACAAAACAACAATCAAAGTTTTGGAACAGAACGTCAGATAAAGATACCAGCATACATGGTGAGTAGGAACTCTAATGATGGTTATGGTTGGAGAAAATACGGTCAGAAACAAGTGAAGAAGAGCGAAAACCCTAGGAGTTACTTCAAGTGTACGTATCCTGATTGTGTTTCCAAGAAGATTGTTGAGACGGCTTCTGATGGACAGATCACTGAGATCATTTATAAAGGTGGTCATAATCATCCTAAGCCTGAGTTCACCAAGAGACCATCTCAATCTTCATTACCATCATCGGTTAATGGGAGGCGCTTGTTTAATCCTGCTTCTGTTGTTAGTGAACCTCATGATCAATCAGAGAACTCTTCGATTTCGTTTGACTATAGTGATCTTGAGCAGAAAAGTTTTAAATCAGAGTATGGTGAGATAGATGAAGAGGAGGAACAACCTGAGATGAAGAGGATGAAAAGAGAAGGTGAAGATGAAGGGATGTCTATAGAAGTAAGCAAAGGAGTTAAAGAGCCAAGAGTTGTGGTTCAGACAATAAGTGATATTGATGTTCTTATAGATGGCTTTAGATGGAGGAAATATGGTCAAAAAGTTGTCAAAGGAAATACTAATCCAAGGAGCTACTACAAGTGCACATTCCAAGGTTGTGGAGTGAAGAAGCAAGTGGAAAGATCCGCAGCAGACGAGAGAGCAGTTCTCACTACCTATGAAGGAAGACACAATCACGATATCCCAACCGCGCTACGTCGCTCGTGAAATTATTGGGACTTAGTCACTAGTAATATGATTTAGGCTTTCTAAAAACAAAAAATCTTACTATGGCTTATCTTTTGTGCTCATTCACAGTTTGTTTATTTGTTTGTTACACAGTCAATACTTTGTTTTGTACAGAGTGGTGCTTAGTAGTGTTTTTATTATTATCTTGGCCTTATAGAATAACCTCTCTTCTCATCTGTGTGACTTTAAACACTTGAGAGTCCATTTTATAGTTCTTGTGTATTGGTCTTTTGTTTGATTTATGTACATTTTTAATATTCAAATTTGATAAAGCAATAATAATGGTTTGTAACCCACTTTGCTTGATTGGTGCAACACATCTAG
CDS Sequence
- >AT2G30250.1
ATGTCTTCCACTTCTTTCACCGACCTTCTTGGTTCTTCCGGCGTTGACTGTTACGAAGATGATGAAGACTTGAGAGTTTCTGGGTCGAGTTTTGGTGGGTACTATCCAGAGAGAACCGGGTCTGGTTTACCTAAGTTCAAGACGGCTCAACCACCACCTCTTCCGATTTCACAATCTTCTCATAACTTCACTTTCTCCGATTACCTTGATTCTCCTCTGCTTCTCAGCTCCTCACACAGTTTGATATCTCCAACAACAGGAACGTTTCCATTGCAAGGCTTTAATGGAACAACAAACAATCACTCAGATTTTCCCTGGCAGCTACAATCTCAACCATCAAACGCTTCTTCTGCTTTGCAAGAAACATATGGTGTTCAAGATCACGAGAAGAAGCAGGAGATGATTCCTAATGAGATTGCAACACAAAACAACAATCAAAGTTTTGGAACAGAACGTCAGATAAAGATACCAGCATACATGGTGAGTAGGAACTCTAATGATGGTTATGGTTGGAGAAAATACGGTCAGAAACAAGTGAAGAAGAGCGAAAACCCTAGGAGTTACTTCAAGTGTACGTATCCTGATTGTGTTTCCAAGAAGATTGTTGAGACGGCTTCTGATGGACAGATCACTGAGATCATTTATAAAGGTGGTCATAATCATCCTAAGCCTGAGTTCACCAAGAGACCATCTCAATCTTCATTACCATCATCGGTTAATGGGAGGCGCTTGTTTAATCCTGCTTCTGTTGTTAGTGAACCTCATGATCAATCAGAGAACTCTTCGATTTCGTTTGACTATAGTGATCTTGAGCAGAAAAGTTTTAAATCAGAGTATGGTGAGATAGATGAAGAGGAGGAACAACCTGAGATGAAGAGGATGAAAAGAGAAGGTGAAGATGAAGGGATGTCTATAGAAGTAAGCAAAGGAGTTAAAGAGCCAAGAGTTGTGGTTCAGACAATAAGTGATATTGATGTTCTTATAGATGGCTTTAGATGGAGGAAATATGGTCAAAAAGTTGTCAAAGGAAATACTAATCCAAGGAGCTACTACAAGTGCACATTCCAAGGTTGTGGAGTGAAGAAGCAAGTGGAAAGATCCGCAGCAGACGAGAGAGCAGTTCTCACTACCTATGAAGGAAGACACAATCACGATATCCCAACCGCGCTACGTCGCTCGTGA
Protein Sequence
- >AT2G30250.1
MSSTSFTDLLGSSGVDCYEDDEDLRVSGSSFGGYYPERTGSGLPKFKTAQPPPLPISQSSHNFTFSDYLDSPLLLSSSHSLISPTTGTFPLQGFNGTTNNHSDFPWQLQSQPSNASSALQETYGVQDHEKKQEMIPNEIATQNNNQSFGTERQIKIPAYMVSRNSNDGYGWRKYGQKQVKKSENPRSYFKCTYPDCVSKKIVETASDGQITEIIYKGGHNHPKPEFTKRPSQSSLPSSVNGRRLFNPASVVSEPHDQSENSSISFDYSDLEQKSFKSEYGEIDEEEEQPEMKRMKREGEDEGMSIEVSKGVKEPRVVVQTISDIDVLIDGFRWRKYGQKVVKGNTNPRSYYKCTFQGCGVKKQVERSAADERAVLTTYEGRHNHDIPTALRRS