Information report for AT2G30210
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0009001 — fruit — frucht (exact, German), fruto (exact, Spanish), 果実 (exact, Japanese), coenocarp (narrow), syncarp (narrow), aggregate fruit (broad), compound fruit (broad), dehiscent fruit (broad), diaspore (broad), indehiscent fruit (broad), multiple fruit (broad), propagule (broad)
- GO:0005576 — located in — extracellular region
- GO:0005507 — enables — copper ion binding
- GO:0009737 — acts upstream of or within — response to abscisic acid
- GO:0048364 — acts upstream of or within — root development
- GO:0009888 — acts upstream of or within — tissue development
- GO:0016491 — enables — oxidoreductase activity
- GO:0052716 — enables — hydroquinone:oxygen oxidoreductase activity
- GO:0048226 — located in — Casparian strip
- SALK_031901C — no observable phenotype
Literature and News
- Transcriptional regulation of secondary growth in Arabidopsis thaliana. DOI: 10.1093/jxb/erg304 ; PMID: 14585825
- Transcriptional profiling by cDNA-AFLP and microarray analysis reveals novel insights into the early response to ethylene in Arabidopsis. DOI: 10.1111/j.1365-313X.2004.02156.x ; PMID: 15272873
- Gene structure and molecular analysis of the laccase-like multicopper oxidase (LMCO) gene family in Arabidopsis thaliana. DOI: 10.1007/s00425-004-1472-6 ; PMID: 15940465
- TRANSPARENT TESTA10 encodes a laccase-like enzyme involved in oxidative polymerization of flavonoids in Arabidopsis seed coat. DOI: 10.1105/tpc.105.035154 ; PMID: 16243908
- Natural genetic variation in whole-genome expression in Arabidopsis thaliana: the impact of physiological QTL introgression. DOI: 10.1111/j.1365-294X.2006.02774.x ; PMID: 16626458
- Mutant identification and characterization of the laccase gene family in Arabidopsis. DOI: 10.1093/jxb/erl022 ; PMID: 16804053
- MicroRNA-mediated systemic down-regulation of copper protein expression in response to low copper availability in Arabidopsis. DOI: 10.1074/jbc.M801406200 ; PMID: 18408011
- A new picture of cell wall protein dynamics in elongating cells of Arabidopsis thaliana: confirmed actors and newcomers. DOI: 10.1186/1471-2229-8-94 ; PMID: 18796151
- The laccase multigene family in Arabidopsis thaliana: towards addressing the mystery of their gene function(s). DOI: 10.1007/s00425-010-1298-3 ; PMID: 21063888
- The Altered Expression of microRNA408 Influences the Arabidopsis Response to Iron Deficiency. DOI: 10.3389/fpls.2019.00324 ; PMID: 31001291
- Laccase3-based extracellular domain provides possible positional information for directing Casparian strip formation in Arabidopsis. DOI: 10.1073/pnas.2005429117 ; PMID: 32571955
- High-order mutants reveal an essential requirement for peroxidases but not laccases in Casparian strip lignification. DOI: 10.1073/pnas.2012728117 ; PMID: 33139576
- microRNA408 and its encoded peptide regulate sulfur assimilation and arsenic stress response in Arabidopsis. DOI: 10.1093/plphys/kiad033 ; PMID: 36682886
- a in poplar. DOI: 10.1046/j.1432-1327.1999.00061.x ; PMID: 9914531
Gene Resources
- UniProt: A0A5S9X2S3
- EMBL: CACRSJ010000105, CACSHJ010000088
- AlphaFoldDB: A0A5S9X2S3
- EnsemblPlants: AT2G30210.1
- Gramene: AT2G30210.1
- KEGG: ath:AT2G30210
- Orthologous matrix: SQCPIAK
- ExpressionAtlas: AT2G30210
- InterPro: IPR001117, IPR002355, IPR008972
- PANTHER: PTHR11709, PTHR11709:SF415
- SUPFAM: SSF49503
- PROSITE: PS00079, PS00080
- Gene3D: 2.60.40.420
- OrthoDB: A0A5S9X2S3
- SWISS-MODEL: A0A5S9X2S3
- Conserved Domain Database: cd13849, cd13875, cd13897
Homologs
- Brassica napus BnaTT10.A06, BnaTT10.C02
- Gossypium hirsutum GhLAC4-3
- Oryza sativa OsChI1, OsLAC, Oslacc, OsLAC10, OsLAC13, OsLAC17
- Prunus persica PRUPE_6G048400
- Solanum tuberosum Soltu.DM.05G022410
- Vitis vinifera VIT_06s0004g07420, VIT_218s0075g00580
Sequences
cDNA Sequence
- >AT2G30210.1
CTCTGTTGTTTCCCGCTTAGTGTGTATAAATACCACTCCTTCCTTTTCTCCAAACTCATCTCACAAATCTCCAACACAGAGAGCTTCTCACAGTGAAGCAAACAATGGAGTCTTTTCGGCGATTCTCCTTGCTATCCTTCATTGCCCTACTTGCCTACTTCGCTTTCCTCGCTTCTGCTGAACATCACGTCCATCAATTCGTGATCACACCGACACCAGTGAAGAGGCTGTGCAGAACTCACCAAAGCATCACTGTGAATGGTCAGTACCCTGGTCCAACGCTTGTGGTCAGGAACGGTGACTCTCTCGCAATCACTGTCATCAACAGAGCCCGTTACAACATTAGTATTCATTGGCATGGAATCAGACAGCTGCGGAATCCGTGGGCCGATGGTCCAGAGTATATAACACAATGTCCGATCCGTCCAGGACAAACCTACACTTACAGATTCAAAATCGAGGATCAAGAGGGTACGCTTTGGTGGCACGCTCATAGCCGCTGGCTCAGAGCCACGGTCTATGGTGCTCTCATCATTTACCCTCGTCTTGGTTCTCCTTATCCCTTCTCTATGCCCAAACGTGACATTCCAATTCTTCTTGGGGAATGGTGGGATAGAAACCCAATGGATGTTTTGAAGCAAGCACAATTTACGGGAGCAGCAGCTAATGTCTCTGACGCTTACACAATCAACGGTCAACCAGGCGATCTTTACCGCTGCTCGCGGGCTGGGACAATCCGTTTTCCAATTTTCCCCGGGGAGACGGTGCAACTCCGTGTCATCAACGCTGGTATGAACCAAGAGCTCTTCTTCTCAGTCGCCAACCACCAGTTCACAGTTGTAGAAACTGATTCCGCCTACACGAAACCATTCACCACAAATGTCATCATGATCGGTCCTGGCCAAACCACTAACGTCCTCCTCACGGCAAACCAGAGACCAGGCCGCTACTACATGGCAGCTCGAGCCTACAACAGCGCAAACGCCCCGTTCGACAACACAACCACTACTGCTATCTTACAATACGTCAACGCTCCAACAAGACGTGGCCGTGGTCGTGGTCAAATCGCTCCTGTTTTCCCAGTCCTCCCCGGGTTCAACGACACCGCAACCGCAACTGCTTTCACCAACCGTCTCCGATACTGGAAACGAGCTCCAGTACCACAACAAGTCGACGAGAACCTCTTTTTCACCGTCGGATTAGGGCTAATCAACTGTGCCAACCCAAACAGTCCCCGTTGCCAAGGTCCTAACGGGACCCGATTCGCAGCAAGCATGAACAACATGTCCTTCGTGCTACCACGAAGTAACTCCGTCATGCAAGCATATTACCAAGGCACCCCAGGAATCTTCACAACGGATTTTCCGCCCGTTCCACCGGTGCAATTCGATTACACAGGTAACGTTAGCCGCGGGTTATGGCAGCCCATAAAAGGAACCAAAGCTTACAAGCTTAAGTACAAATCTAATGTTCAGATTGTGTTACAAGACACTAGCATTGTCACGCCAGAGAATCATCCCATGCATCTACACGGGTACCAATTCTACGTGGTCGGGTCAGGTTTCGGTAATTTCAACCCGAGAACAGACCCGGCTAGGTTTAACTTATTTGACCCACCAGAGAGGAACACCATTGGAACACCTCCAGGTGGTTGGGTGGCAATTCGGTTCGTCGCTGATAATCCAGGAGCATGGTTTATGCATTGTCACATTGATTCACATTTGGGATGGGGTTTGGCTATGGTTTTCTTGGTAGAGAACGGTCGTGGACAGTTGCAATCGGTGCAGGCTCCACCATTGGATCTTCCAAGATGCTAATAAAAAACTTCTACCGTTGGATCTAAAGAATTTATGGGGTTTGGTTTTTTGTTCTTGTTTTTTAATCAAAAAAAGACTTCGTGAGTCTTGATATGTTAAAGATGGACAACTGCTCTATTGAAAGTGGTTCAACCTTTGTTTTCGATGTACTTTTGTTATTTTCCTCGTAATAGAGTGAGTGTTTTCATTTTTCCGATTAAAAATTTACCAAATAAAAGCTGTGTTAGTTAATCTTCTTTTTCTAGCTGACTTTCCCAAACAACTTTATTAGTTATTAACTTAATATGAA
CDS Sequence
- >AT2G30210.1
ATGGAGTCTTTTCGGCGATTCTCCTTGCTATCCTTCATTGCCCTACTTGCCTACTTCGCTTTCCTCGCTTCTGCTGAACATCACGTCCATCAATTCGTGATCACACCGACACCAGTGAAGAGGCTGTGCAGAACTCACCAAAGCATCACTGTGAATGGTCAGTACCCTGGTCCAACGCTTGTGGTCAGGAACGGTGACTCTCTCGCAATCACTGTCATCAACAGAGCCCGTTACAACATTAGTATTCATTGGCATGGAATCAGACAGCTGCGGAATCCGTGGGCCGATGGTCCAGAGTATATAACACAATGTCCGATCCGTCCAGGACAAACCTACACTTACAGATTCAAAATCGAGGATCAAGAGGGTACGCTTTGGTGGCACGCTCATAGCCGCTGGCTCAGAGCCACGGTCTATGGTGCTCTCATCATTTACCCTCGTCTTGGTTCTCCTTATCCCTTCTCTATGCCCAAACGTGACATTCCAATTCTTCTTGGGGAATGGTGGGATAGAAACCCAATGGATGTTTTGAAGCAAGCACAATTTACGGGAGCAGCAGCTAATGTCTCTGACGCTTACACAATCAACGGTCAACCAGGCGATCTTTACCGCTGCTCGCGGGCTGGGACAATCCGTTTTCCAATTTTCCCCGGGGAGACGGTGCAACTCCGTGTCATCAACGCTGGTATGAACCAAGAGCTCTTCTTCTCAGTCGCCAACCACCAGTTCACAGTTGTAGAAACTGATTCCGCCTACACGAAACCATTCACCACAAATGTCATCATGATCGGTCCTGGCCAAACCACTAACGTCCTCCTCACGGCAAACCAGAGACCAGGCCGCTACTACATGGCAGCTCGAGCCTACAACAGCGCAAACGCCCCGTTCGACAACACAACCACTACTGCTATCTTACAATACGTCAACGCTCCAACAAGACGTGGCCGTGGTCGTGGTCAAATCGCTCCTGTTTTCCCAGTCCTCCCCGGGTTCAACGACACCGCAACCGCAACTGCTTTCACCAACCGTCTCCGATACTGGAAACGAGCTCCAGTACCACAACAAGTCGACGAGAACCTCTTTTTCACCGTCGGATTAGGGCTAATCAACTGTGCCAACCCAAACAGTCCCCGTTGCCAAGGTCCTAACGGGACCCGATTCGCAGCAAGCATGAACAACATGTCCTTCGTGCTACCACGAAGTAACTCCGTCATGCAAGCATATTACCAAGGCACCCCAGGAATCTTCACAACGGATTTTCCGCCCGTTCCACCGGTGCAATTCGATTACACAGGTAACGTTAGCCGCGGGTTATGGCAGCCCATAAAAGGAACCAAAGCTTACAAGCTTAAGTACAAATCTAATGTTCAGATTGTGTTACAAGACACTAGCATTGTCACGCCAGAGAATCATCCCATGCATCTACACGGGTACCAATTCTACGTGGTCGGGTCAGGTTTCGGTAATTTCAACCCGAGAACAGACCCGGCTAGGTTTAACTTATTTGACCCACCAGAGAGGAACACCATTGGAACACCTCCAGGTGGTTGGGTGGCAATTCGGTTCGTCGCTGATAATCCAGGAGCATGGTTTATGCATTGTCACATTGATTCACATTTGGGATGGGGTTTGGCTATGGTTTTCTTGGTAGAGAACGGTCGTGGACAGTTGCAATCGGTGCAGGCTCCACCATTGGATCTTCCAAGATGCTAA
Protein Sequence
- >AT2G30210.1
MESFRRFSLLSFIALLAYFAFLASAEHHVHQFVITPTPVKRLCRTHQSITVNGQYPGPTLVVRNGDSLAITVINRARYNISIHWHGIRQLRNPWADGPEYITQCPIRPGQTYTYRFKIEDQEGTLWWHAHSRWLRATVYGALIIYPRLGSPYPFSMPKRDIPILLGEWWDRNPMDVLKQAQFTGAAANVSDAYTINGQPGDLYRCSRAGTIRFPIFPGETVQLRVINAGMNQELFFSVANHQFTVVETDSAYTKPFTTNVIMIGPGQTTNVLLTANQRPGRYYMAARAYNSANAPFDNTTTTAILQYVNAPTRRGRGRGQIAPVFPVLPGFNDTATATAFTNRLRYWKRAPVPQQVDENLFFTVGLGLINCANPNSPRCQGPNGTRFAASMNNMSFVLPRSNSVMQAYYQGTPGIFTTDFPPVPPVQFDYTGNVSRGLWQPIKGTKAYKLKYKSNVQIVLQDTSIVTPENHPMHLHGYQFYVVGSGFGNFNPRTDPARFNLFDPPERNTIGTPPGGWVAIRFVADNPGAWFMHCHIDSHLGWGLAMVFLVENGRGQLQSVQAPPLDLPRC