Information report for AT2G30080
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
- GO:0009624 — acts upstream of or within — response to nematode
- GO:0071577 — involved in — zinc ion transmembrane transport
- GO:0046873 — enables — metal ion transmembrane transporter activity
- GO:0005886 — is active in — plasma membrane
- GO:0005385 — enables — zinc ion transmembrane transporter activity
Functional Keywords
- shoot axis apex , root , shoot system , plant embryo , vascular leaf , stamen , sepal , flower , inflorescence flower pedicel , cotyledon , hypocotyl , leaf apex , collective leaf structure , pollen , root , plant sperm cell
Literature and News
- Phylogenetic relationships within cation transporter families of Arabidopsis. DOI: 10.1104/pp.126.4.1646 ; PMID: 11500563
- Expression profiles of Arabidopsis thaliana in mineral deficiencies reveal novel transporters involved in metal homeostasis. DOI: 10.1074/jbc.M309338200 ; PMID: 13129917
- Comparative microarray analysis of Arabidopsis thaliana and Arabidopsis halleri roots identifies nicotianamine synthase, a ZIP transporter and other genes as potential metal hyperaccumulation factors. DOI: 10.1046/j.1365-313x.2003.01960.x ; PMID: 14690510
- Nematode-induced changes of transporter gene expression in Arabidopsis roots. DOI: 10.1094/MPMI-18-1247 ; PMID: 16478044
- A comparison of the Thlaspi caerulescens and Thlaspi arvense shoot transcriptomes. DOI: 10.1111/j.1469-8137.2006.01662.x ; PMID: 16608451
- The heavy metal hyperaccumulator Thlaspi caerulescens expresses many species-specific genes, as identified by comparative expressed sequence tag analysis. DOI: 10.1111/j.1469-8137.2006.01714.x ; PMID: 16684236
- Zinc-dependent global transcriptional control, transcriptional deregulation, and higher gene copy number for genes in metal homeostasis of the hyperaccumulator Arabidopsis halleri. DOI: 10.1104/pp.105.076232 ; PMID: 16844841
- A quantitative trait loci analysis of zinc hyperaccumulation in Arabidopsis halleri. DOI: 10.1111/j.1469-8137.2007.02036.x ; PMID: 17447913
- Expression and functional analysis of metal transporter genes in two contrasting ecotypes of the hyperaccumulator Thlaspi caerulescens. DOI: 10.1093/jxb/erm025 ; PMID: 17404382
- Quantitative trait locus mapping for seed mineral concentrations in two Arabidopsis thaliana recombinant inbred populations. DOI: 10.1111/j.1469-8137.2008.02544.x ; PMID: 18631293
- Arabidopsis and rice showed a distinct pattern in ZIPs genes expression profile in response to Cd stress. DOI: 10.1186/s40529-018-0238-6 ; PMID: 30255457
- Redundant roles of four ZIP family members in zinc homeostasis and seed development in Arabidopsis thaliana. DOI: 10.1111/tpj.15506 ; PMID: 34559918
- Phylogenetic relationships within cation transporter families of Arabidopsis. DOI: 10.1104/pp.126.4.1646 ; PMID: 11500563
Gene Resources
- UniProt: A0A178VN05
- EMBL: CACRSJ010000105, CACSHJ010000088, LUHQ01000002
- AlphaFoldDB: A0A178VN05
- EnsemblPlants: AT2G30080.1
- Gramene: AT2G30080.1
- KEGG: ath:AT2G30080
- Orthologous matrix: CFMFSAT
- ExpressionAtlas: AT2G30080
- InterPro: IPR003689, IPR004698
- PANTHER: PTHR11040, PTHR11040:SF26
- OrthoDB: A0A178VN05
- SWISS-MODEL: A0A178VN05
Homologs
- Actinidia chinensis Achn296391
- Oryza sativa OsZIP6, OsZIP5, OsZIP8, OsIRT1, OsZIP3, OsZIP4, OsIRT2, OsZIP7a;OsZIP7, OsZIP10, OsZIP9, OsZIP1
- Vitis vinifera GSVIVT01032785001
Sequences
cDNA Sequence
- >AT2G30080.1
AAAAGAATAAGTTTCCTTTAAATTTCCCCAATATCAAAAATGGAAGTCTTACTCAACAACGCACTTCTTTTATAACCGTTTGACGTGTAAGTGGTCCGCGCACTAATCTCTCTCTCCCTCTCTTTCTTCTTCTTCCACAAATGGCTTCTTGCGTCACCGGAACAGAGGCAGCAATCAGAGCAGCGGCATGTAGAGACGGCGAAGAAGCCTCTCATCTAAAGATAGTCGCCGTCTTCGCCATCTTTCTCACAAGCGTTTTCGGAGTTTGGGGACCAGTTTTACTCGCTAAATACTTTCATGGTAAACCTCTGTACGATAAAGCAATTCTTGTGATAAAGTGTTTCGCCGCCGGCGTGATTCTCTCGACGTCTTTAGTCCACGTTTTACCGGAAGCGTTTGAGTCACTCGCTGATTGCCAAGTGTCGTCACGTCATCCATGGAAAGATTTTCCGTTTGCTGGTTTAGTTACGATGATCGGAGCTATAACGGCTTTGTTGGTTGATTTAACGGCGAGTGAACATATGGGACACGGTGGTGGTGGTGGTGGTGACGGAGGGATGGAGTATATGCCGGTGGGTAAGGCGGTTGGAGGGTTAGAAATGAAAGAAGGAAAGTGTGGGGCTGATTTGGAAATACAAGAAAATAGTGAGGAGGAAATTGTGAAGATGAAACAAAGATTAGTGTCACAAGTTCTTGAAATAGGGATTATATTTCATTCGGTGATAATTGGAGTAACAATGGGAATGTCACAAAATAAGTGTACCATTAGACCTTTGATTGCTGCGCTTTCTTTTCATCAGATTTTTGAAGGTTTGGGTCTTGGTGGTTGCATTGCTCAGGCTGGGTTTAAGGCAGGGACAGTGGTGTATATGTGCTTAATGTTCGCGGTAACAACGCCACTCGGGATTGTACTAGGGATGGTGATATTTGCAGCGACCGGGTACGATGATCAGAACCCGAACGCATTGATAATGGAGGGTTTATTGGGATCATTCTCTTCAGGTATTCTAATATACATGGCCTTGGTTGACCTAATTGCATTGGATTTCTTCCATAACAAGATGCTGACGACTTGCGGTGAATCGGGTTCTCGCCTCAAGAAGCTTTGTTTTGTGGCTTTGGTTTTAGGTTCTGCCTCTATGTCACTACTTGCTCTTTGGGCTTAGACAAAAAGAATTTAAGGTTATATACTAATTTGGCCACAGGAAATAGTATGAATACCTAAACCTGTTTTAACATATTTGAACTTTGGTTTACTTTATAAATATATCTAATT
CDS Sequence
- >AT2G30080.1
ATGGCTTCTTGCGTCACCGGAACAGAGGCAGCAATCAGAGCAGCGGCATGTAGAGACGGCGAAGAAGCCTCTCATCTAAAGATAGTCGCCGTCTTCGCCATCTTTCTCACAAGCGTTTTCGGAGTTTGGGGACCAGTTTTACTCGCTAAATACTTTCATGGTAAACCTCTGTACGATAAAGCAATTCTTGTGATAAAGTGTTTCGCCGCCGGCGTGATTCTCTCGACGTCTTTAGTCCACGTTTTACCGGAAGCGTTTGAGTCACTCGCTGATTGCCAAGTGTCGTCACGTCATCCATGGAAAGATTTTCCGTTTGCTGGTTTAGTTACGATGATCGGAGCTATAACGGCTTTGTTGGTTGATTTAACGGCGAGTGAACATATGGGACACGGTGGTGGTGGTGGTGGTGACGGAGGGATGGAGTATATGCCGGTGGGTAAGGCGGTTGGAGGGTTAGAAATGAAAGAAGGAAAGTGTGGGGCTGATTTGGAAATACAAGAAAATAGTGAGGAGGAAATTGTGAAGATGAAACAAAGATTAGTGTCACAAGTTCTTGAAATAGGGATTATATTTCATTCGGTGATAATTGGAGTAACAATGGGAATGTCACAAAATAAGTGTACCATTAGACCTTTGATTGCTGCGCTTTCTTTTCATCAGATTTTTGAAGGTTTGGGTCTTGGTGGTTGCATTGCTCAGGCTGGGTTTAAGGCAGGGACAGTGGTGTATATGTGCTTAATGTTCGCGGTAACAACGCCACTCGGGATTGTACTAGGGATGGTGATATTTGCAGCGACCGGGTACGATGATCAGAACCCGAACGCATTGATAATGGAGGGTTTATTGGGATCATTCTCTTCAGGTATTCTAATATACATGGCCTTGGTTGACCTAATTGCATTGGATTTCTTCCATAACAAGATGCTGACGACTTGCGGTGAATCGGGTTCTCGCCTCAAGAAGCTTTGTTTTGTGGCTTTGGTTTTAGGTTCTGCCTCTATGTCACTACTTGCTCTTTGGGCTTAG
Protein Sequence
- >AT2G30080.1
MASCVTGTEAAIRAAACRDGEEASHLKIVAVFAIFLTSVFGVWGPVLLAKYFHGKPLYDKAILVIKCFAAGVILSTSLVHVLPEAFESLADCQVSSRHPWKDFPFAGLVTMIGAITALLVDLTASEHMGHGGGGGGDGGMEYMPVGKAVGGLEMKEGKCGADLEIQENSEEEIVKMKQRLVSQVLEIGIIFHSVIIGVTMGMSQNKCTIRPLIAALSFHQIFEGLGLGGCIAQAGFKAGTVVYMCLMFAVTTPLGIVLGMVIFAATGYDDQNPNALIMEGLLGSFSSGILIYMALVDLIALDFFHNKMLTTCGESGSRLKKLCFVALVLGSASMSLLALWA