Gene Details:
- Gene ID: AT2G29790
- Gene Symbol: PCP-Bbeta
- Gene Name: POLLEN COAT PROTEIN B CLASS BETA
- Description: maternally expressed family protein;(source:Araport11)
- TAIR Accession: locus:2060594
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- PO:0025195 — pollen tube cell — célula del tubo polínico (Spanish, exact), 花粉管細胞 (Japanese, exact)
Gene Ontology:
- GO:0009507 — located in — chloroplast
- GO:0005739 — located in — mitochondrion
- GO:0003674 — enables — molecular_function
- GO:0140301 — acts upstream of or within — pollen-stigma interaction
- GO:0005576 — located in — extracellular region
Function-related keywords:
Literature:
- Transcriptional profiling of Arabidopsis tissues reveals the unique characteristics of the pollen transcriptome. DOI: 10.1104/pp.103.028241 ; PMID: 14500793
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- PCP-B class pollen coat proteins are key regulators of the hydration checkpoint in Arabidopsis thaliana pollen-stigma interactions. DOI: 10.1111/nph.14162 ; PMID: 27596924
- Small cysteine-rich peptides resembling antimicrobial peptides have been under-predicted in plants. DOI: 10.1111/j.1365-313X.2007.03136.x ; PMID: 17565583
Sequences:
cDNA Sequence
- >AT2G29790.2
AAAAAAAAAAAAGTTTCTGATTTTTAGAAGAATGTCACCATCACATTTTGCTATCCTTTTCATCATCGTAATTTCTCTGGTTCCTCTACATGGATCTGGAAACACACAACATCATAACGCGAACAAGCCAGCTCCAAACGCACAAGCTGTTGACGCAAGCAAATCAGCTGGAGACAAGACACACAGTTTTGACGCCAACAAGGCAGCTGCAAACGCACAAGCTGTTGACGCGACCAAATCAGATGCAAACGGGCAAGGTTTTGACGCGAACAAGTTAGGTTCATCAGTGTGCCATCTTGGCAAATGTCCAAAACACAGAGAAGAAGTGTGTTATTGCTGTTTCAATGATCGTAGCAGGTGTTATCGTAGTTTATATAAG - >AT2G29790.3
AAAAAAAAAAAAGTTTCTGATTTTTAGAAGAATGTCACCATCACATTTTGCTATCCTTTTCATCATCGTAATTTCTCTGGTTCCTCTACATGGATCTGGAAACACACAACATCATAACGCGAACAAGCCAGCTCCAAACGCACAAGCTGTTGACGCAAGCAAATCAGCTGGAGACAAGACACACAGTTTTGACGCCAACAAGGCAGCTGCAAACGCACAAGCTGTTGACGCGACCAAATCAGATGCAAACGGGCAAGGTTTTGACGCGAACAAGTTAGGTTCATCAGTGTGCCATCTTGGCAAATGTCCAAAACACAGAGAAGAAGTGTGTTATTGCTGTTTCAATGATCGTAGCAGGTGTTATCGTAGTTTATATAAG - >AT2G29790.1
AAAAAAAAAAAAGTTTCTGATTTTTAGAAGAATGTCACCATCACATTTTGCTATCCTTTTCATCATCGTAATTTCTCTGGTTCCTCTACATGGATCTGGAAACACACAACATCATAACGCGAACAAGCCAGCTCCAAACGCACAAGCTGTTGACGCAAGCAAATCAGCTGGAGACAAGACACACAGTTTTGACGCCAACAAGGCAGCTGCAAACGCACAAGCTGTTGACGCGACCAAATCAGATGCAAACGGGCAAGGTTTTGACGCGAACAAGTTAGGTTCATCAGTGTGCCATCTTGGCAAATGTCCAAAACACAGAGAAGAAGTGTGTTATTGCTGTTTCAATGATCGTAGCAGGTGTTATCGTAGTTTATATAAG
CDS Sequence
- >AT2G29790.2
ATGGATCTGGAAACACACAACATCATAACGCGAACAAGCCAGCTCCAAACGCACAAGCTGTTGACGCAAGCAAATCAGCTGGAGACAAGACACACAGTTTTGACGCCAACAAGGCAGCTGCAAACGCACAAGCTGTTGACGCGACCAAATCAGATGCAAACGGGCAAGGTTTTGACGCGAACAAGTTAG - >AT2G29790.3
ATGGATCTGGAAACACACAACATCATAACGCGAACAAGCCAGCTCCAAACGCACAAGCTGTTGACGCAAGCAAATCAGCTGGAGACAAGACACACAGTTTTGACGCCAACAAGGCAGCTGCAAACGCACAAGCTGTTGACGCGACCAAATCAGATGCAAACGGGCAAGGTTTTGACGCGAACAAGTTAG - >AT2G29790.1
ATGGATCTGGAAACACACAACATCATAACGCGAACAAGCCAGCTCCAAACGCACAAGCTGTTGACGCAAGCAAATCAGCTGGAGACAAGACACACAGTTTTGACGCCAACAAGGCAGCTGCAAACGCACAAGCTGTTGACGCGACCAAATCAGATGCAAACGGGCAAGGTTTTGACGCGAACAAGTTAG
Protein Sequence
- >AT2G29790.2
MDLETHNIITRTSQLQTHKLLTQANQLETRHTVLTPTRQLQTHKLLTRPNQMQTGKVLTRTS - >AT2G29790.3
MDLETHNIITRTSQLQTHKLLTQANQLETRHTVLTPTRQLQTHKLLTRPNQMQTGKVLTRTS - >AT2G29790.1
MDLETHNIITRTSQLQTHKLLTQANQLETRHTVLTPTRQLQTHKLLTRPNQMQTGKVLTRTS