Gene Details:
- Gene ID: AT2G29580
- Gene Symbol: AtC3H25, MAC5B
- Gene Name: MOS4-associated complex subunit 5B
- Description: CCCH-type zinc fingerfamily protein with RNA-binding domain-containing protein;(source:Araport11)
- TAIR Accession:
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
Function-related keywords:
- shoot axis apex , leaf lamina base , shoot system , plant embryo , sepal , flower , collective leaf structure
Literature:
- Evidence for a direct link between glutathione biosynthesis and stress defense gene expression in Arabidopsis. DOI: 10.1105/tpc.104.022608 ; PMID: 15308753
- Genome-wide analysis of CCCH zinc finger family in Arabidopsis and rice. DOI: 10.1186/1471-2164-9-44 ; PMID: 18221561
- Two putative RNA-binding proteins function with unequal genetic redundancy in the MOS4-associated complex. DOI: 10.1104/pp.110.158931 ; PMID: 20943852
- Discovering the RNA-Binding Proteome of Plant Leaves with an Improved RNA Interactome Capture Method. DOI: 10.3390/biom10040661 ; PMID: 32344669
Sequences:
cDNA Sequence
- >AT2G29580.1
ACTTTAAGCTTTCTTATTTCATGGGTTTAAATTGGGCCAAACAAACATTCGGCCCAACAGCAGCTGTAATATTAAAGATTCCCGAAAAAATCGAAACGAGAGCAAATCTGCTCTTCAAGGTAATCTTCGTGTTCGAGACTGAAGAAGAAATCCAGAAATCATTGAGGAAGGAAGAGAATTAGGAAATGGCGCATAGAATACTGAGAGATCACGAGGCTGATGGATGGGAACGTTCTGATTTCCCAATCATCTGTGAGTCTTGTCTCGGTGACAATCCTTACGTGAGAATGACAAAGGCGAATTACGATAAAGAGTGTAAGATCTGTACCCGGCCTTTCACGGTTTTCAGATGGCGACCTGGTAGGGATGCGAGATACAAGAAGACTGAAGTTTGTCAGACATGTTGCAAGTTGAAGAATGTGTGCCAAGTTTGTCTCTTGGATCTTGAGTATGGTCTTCCAGTTCAGGTCAGAGACACGGCGCTCAACATTAGTACTCATGATTCTATCCCAAAAAGTGATGTGAACCGAGAGTTTTTCGCTGAAGAGCATGATCGAAAGACGAGAGCTGGACTAGATTATGAGTCTTCTTTTGGGAAGATTCGGCCCAACGATACCATTCGTATGCTTCAAAGGACAACGCCTTACTACAAAAGGAACCGAGCTCATATTTGTAGTTTCTTCATTAGGGGAGAGTGTACAAGAGGTGATGAGTGTCCATACCGTCATGAGATGCCTGAAACAGGAGAGTTATCCCAGCAGAACATTAAAGACCGTTATTATGGTGTAAACGATCCAGTTGCGTTGAAGTTACTTGGCAAGGCTGGGGAGATGGGTACTTTGGAATCTCCAGAGGATCAAAGCATCAGAACGCTTTATGTTGGTGGGCTAAACTCGAGAGTCCTTGAGCAAGACATTCGTGATCAATTCTACGCCCATGGAGAAATCGAATCCATCAGAATCTTGGCTGAGAAAGCATGTGCGTTTGTCACTTACACAACCCGAGAAGGAGCAGAGAAAGCTGCAGAAGAGCTCAGTAACAGGCTAGTTGTCAACGGTCAGAGGCTAAAACTCACATGGGGAAGACCTCAGGTTCCCAAACCTGATCAAGATGGTTCTAACCAACAGGGCAGTGTGGCTCATAGTGGTTTACTACCTCGAGCAGTTATATCTCAGCAACAGAATCAACCTCCACCAATGCTACAATACTATATGCACCCACCACCACCACAACCTCCTCATCAAGACAGACCATTTTACCCATCAATGGACCCTCAGAGAATGGGTGCAGTTAGTTCGTCCAAAGAAAGCGGTTCAAGCACCAGTGACAACAGAGGAGCTTCTTCTTCTTCTTACACTATGCCACCACATGGCCACTATCCTCAGCACCAGCCATACCCGCCACCATCATATGGAGGATATATGCAACCACCTTACCAGCAGTATCCTCCTTACCACCATGGCCATTCACAACAAGCTGATCATGATTACCCACAACAACCAGGTCCCGGTTCAAGGCCTAATCCTCCACATCCAAGTTCAGTCTCTGCTCCACCACCTGACTCTGTGTCTGCAGCACCTTCAGGATCCTCTCAGCAATCTGCTGATGCTGCTGTTACTACTGGTTCGTCTCAATAGGAACCGTTGTCAGTTAAAATGTAGTGCGAATTTCCGGCCATATCTACATTTTGACTTTTTGCTTCTGCTATTTAAAATTAGTTTCCAATGTAAGAGAAGAGAATTGTTACAGTAGTTGTAGACTCTTGTTGACATTATAATTTTGAATTTTTGATAATCCAACATACACATTAAATCC
CDS Sequence
- >AT2G29580.1
ATGGCGCATAGAATACTGAGAGATCACGAGGCTGATGGATGGGAACGTTCTGATTTCCCAATCATCTGTGAGTCTTGTCTCGGTGACAATCCTTACGTGAGAATGACAAAGGCGAATTACGATAAAGAGTGTAAGATCTGTACCCGGCCTTTCACGGTTTTCAGATGGCGACCTGGTAGGGATGCGAGATACAAGAAGACTGAAGTTTGTCAGACATGTTGCAAGTTGAAGAATGTGTGCCAAGTTTGTCTCTTGGATCTTGAGTATGGTCTTCCAGTTCAGGTCAGAGACACGGCGCTCAACATTAGTACTCATGATTCTATCCCAAAAAGTGATGTGAACCGAGAGTTTTTCGCTGAAGAGCATGATCGAAAGACGAGAGCTGGACTAGATTATGAGTCTTCTTTTGGGAAGATTCGGCCCAACGATACCATTCGTATGCTTCAAAGGACAACGCCTTACTACAAAAGGAACCGAGCTCATATTTGTAGTTTCTTCATTAGGGGAGAGTGTACAAGAGGTGATGAGTGTCCATACCGTCATGAGATGCCTGAAACAGGAGAGTTATCCCAGCAGAACATTAAAGACCGTTATTATGGTGTAAACGATCCAGTTGCGTTGAAGTTACTTGGCAAGGCTGGGGAGATGGGTACTTTGGAATCTCCAGAGGATCAAAGCATCAGAACGCTTTATGTTGGTGGGCTAAACTCGAGAGTCCTTGAGCAAGACATTCGTGATCAATTCTACGCCCATGGAGAAATCGAATCCATCAGAATCTTGGCTGAGAAAGCATGTGCGTTTGTCACTTACACAACCCGAGAAGGAGCAGAGAAAGCTGCAGAAGAGCTCAGTAACAGGCTAGTTGTCAACGGTCAGAGGCTAAAACTCACATGGGGAAGACCTCAGGTTCCCAAACCTGATCAAGATGGTTCTAACCAACAGGGCAGTGTGGCTCATAGTGGTTTACTACCTCGAGCAGTTATATCTCAGCAACAGAATCAACCTCCACCAATGCTACAATACTATATGCACCCACCACCACCACAACCTCCTCATCAAGACAGACCATTTTACCCATCAATGGACCCTCAGAGAATGGGTGCAGTTAGTTCGTCCAAAGAAAGCGGTTCAAGCACCAGTGACAACAGAGGAGCTTCTTCTTCTTCTTACACTATGCCACCACATGGCCACTATCCTCAGCACCAGCCATACCCGCCACCATCATATGGAGGATATATGCAACCACCTTACCAGCAGTATCCTCCTTACCACCATGGCCATTCACAACAAGCTGATCATGATTACCCACAACAACCAGGTCCCGGTTCAAGGCCTAATCCTCCACATCCAAGTTCAGTCTCTGCTCCACCACCTGACTCTGTGTCTGCAGCACCTTCAGGATCCTCTCAGCAATCTGCTGATGCTGCTGTTACTACTGGTTCGTCTCAATAG
Protein Sequence
- >AT2G29580.1
MAHRILRDHEADGWERSDFPIICESCLGDNPYVRMTKANYDKECKICTRPFTVFRWRPGRDARYKKTEVCQTCCKLKNVCQVCLLDLEYGLPVQVRDTALNISTHDSIPKSDVNREFFAEEHDRKTRAGLDYESSFGKIRPNDTIRMLQRTTPYYKRNRAHICSFFIRGECTRGDECPYRHEMPETGELSQQNIKDRYYGVNDPVALKLLGKAGEMGTLESPEDQSIRTLYVGGLNSRVLEQDIRDQFYAHGEIESIRILAEKACAFVTYTTREGAEKAAEELSNRLVVNGQRLKLTWGRPQVPKPDQDGSNQQGSVAHSGLLPRAVISQQQNQPPPMLQYYMHPPPPQPPHQDRPFYPSMDPQRMGAVSSSKESGSSTSDNRGASSSSYTMPPHGHYPQHQPYPPPSYGGYMQPPYQQYPPYHHGHSQQADHDYPQQPGPGSRPNPPHPSSVSAPPPDSVSAAPSGSSQQSADAAVTTGSSQ