Information report for AT2G29580
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
Functional Keywords
Literature and News
- Evidence for a direct link between glutathione biosynthesis and stress defense gene expression in Arabidopsis. DOI: 10.1105/tpc.104.022608 ; PMID: 15308753
- Genome-wide analysis of CCCH zinc finger family in Arabidopsis and rice. DOI: 10.1186/1471-2164-9-44 ; PMID: 18221561
- Two putative RNA-binding proteins function with unequal genetic redundancy in the MOS4-associated complex. DOI: 10.1104/pp.110.158931 ; PMID: 20943852
- Discovering the RNA-Binding Proteome of Plant Leaves with an Improved RNA Interactome Capture Method. DOI: 10.3390/biom10040661 ; PMID: 32344669
Gene Resources
- UniProt: A0A5S9X2B5
- EMBL: CACSHJ010000088
- AlphaFoldDB: A0A5S9X2B5
- EnsemblPlants: AT2G29580.1
- Gramene: AT2G29580.1
- KEGG: ath:AT2G29580
- Orthologous matrix: ECICARP
- ExpressionAtlas: AT2G29580
- InterPro: IPR000504, IPR000571, IPR012677
- PANTHER: PTHR14089, PTHR14089:SF6
- SUPFAM: SSF54928, SSF90229
- PROSITE: PS50102, PS50103
- Gene3D: 3.30.70.330, 4.10.1000.10
- OrthoDB: A0A5S9X2B5
- SWISS-MODEL: A0A5S9X2B5
- Conserved Domain Database: cd12224
Homologs
- Brassica napus BnaC04G0041700ZS, BnaA05G0038200ZS
- Brassica oleracea Bo4g019780
- Brassica rapa Bra004761
Sequences
cDNA Sequence
- >AT2G29580.1
ACTTTAAGCTTTCTTATTTCATGGGTTTAAATTGGGCCAAACAAACATTCGGCCCAACAGCAGCTGTAATATTAAAGATTCCCGAAAAAATCGAAACGAGAGCAAATCTGCTCTTCAAGGTAATCTTCGTGTTCGAGACTGAAGAAGAAATCCAGAAATCATTGAGGAAGGAAGAGAATTAGGAAATGGCGCATAGAATACTGAGAGATCACGAGGCTGATGGATGGGAACGTTCTGATTTCCCAATCATCTGTGAGTCTTGTCTCGGTGACAATCCTTACGTGAGAATGACAAAGGCGAATTACGATAAAGAGTGTAAGATCTGTACCCGGCCTTTCACGGTTTTCAGATGGCGACCTGGTAGGGATGCGAGATACAAGAAGACTGAAGTTTGTCAGACATGTTGCAAGTTGAAGAATGTGTGCCAAGTTTGTCTCTTGGATCTTGAGTATGGTCTTCCAGTTCAGGTCAGAGACACGGCGCTCAACATTAGTACTCATGATTCTATCCCAAAAAGTGATGTGAACCGAGAGTTTTTCGCTGAAGAGCATGATCGAAAGACGAGAGCTGGACTAGATTATGAGTCTTCTTTTGGGAAGATTCGGCCCAACGATACCATTCGTATGCTTCAAAGGACAACGCCTTACTACAAAAGGAACCGAGCTCATATTTGTAGTTTCTTCATTAGGGGAGAGTGTACAAGAGGTGATGAGTGTCCATACCGTCATGAGATGCCTGAAACAGGAGAGTTATCCCAGCAGAACATTAAAGACCGTTATTATGGTGTAAACGATCCAGTTGCGTTGAAGTTACTTGGCAAGGCTGGGGAGATGGGTACTTTGGAATCTCCAGAGGATCAAAGCATCAGAACGCTTTATGTTGGTGGGCTAAACTCGAGAGTCCTTGAGCAAGACATTCGTGATCAATTCTACGCCCATGGAGAAATCGAATCCATCAGAATCTTGGCTGAGAAAGCATGTGCGTTTGTCACTTACACAACCCGAGAAGGAGCAGAGAAAGCTGCAGAAGAGCTCAGTAACAGGCTAGTTGTCAACGGTCAGAGGCTAAAACTCACATGGGGAAGACCTCAGGTTCCCAAACCTGATCAAGATGGTTCTAACCAACAGGGCAGTGTGGCTCATAGTGGTTTACTACCTCGAGCAGTTATATCTCAGCAACAGAATCAACCTCCACCAATGCTACAATACTATATGCACCCACCACCACCACAACCTCCTCATCAAGACAGACCATTTTACCCATCAATGGACCCTCAGAGAATGGGTGCAGTTAGTTCGTCCAAAGAAAGCGGTTCAAGCACCAGTGACAACAGAGGAGCTTCTTCTTCTTCTTACACTATGCCACCACATGGCCACTATCCTCAGCACCAGCCATACCCGCCACCATCATATGGAGGATATATGCAACCACCTTACCAGCAGTATCCTCCTTACCACCATGGCCATTCACAACAAGCTGATCATGATTACCCACAACAACCAGGTCCCGGTTCAAGGCCTAATCCTCCACATCCAAGTTCAGTCTCTGCTCCACCACCTGACTCTGTGTCTGCAGCACCTTCAGGATCCTCTCAGCAATCTGCTGATGCTGCTGTTACTACTGGTTCGTCTCAATAGGAACCGTTGTCAGTTAAAATGTAGTGCGAATTTCCGGCCATATCTACATTTTGACTTTTTGCTTCTGCTATTTAAAATTAGTTTCCAATGTAAGAGAAGAGAATTGTTACAGTAGTTGTAGACTCTTGTTGACATTATAATTTTGAATTTTTGATAATCCAACATACACATTAAATCC
CDS Sequence
- >AT2G29580.1
ATGGCGCATAGAATACTGAGAGATCACGAGGCTGATGGATGGGAACGTTCTGATTTCCCAATCATCTGTGAGTCTTGTCTCGGTGACAATCCTTACGTGAGAATGACAAAGGCGAATTACGATAAAGAGTGTAAGATCTGTACCCGGCCTTTCACGGTTTTCAGATGGCGACCTGGTAGGGATGCGAGATACAAGAAGACTGAAGTTTGTCAGACATGTTGCAAGTTGAAGAATGTGTGCCAAGTTTGTCTCTTGGATCTTGAGTATGGTCTTCCAGTTCAGGTCAGAGACACGGCGCTCAACATTAGTACTCATGATTCTATCCCAAAAAGTGATGTGAACCGAGAGTTTTTCGCTGAAGAGCATGATCGAAAGACGAGAGCTGGACTAGATTATGAGTCTTCTTTTGGGAAGATTCGGCCCAACGATACCATTCGTATGCTTCAAAGGACAACGCCTTACTACAAAAGGAACCGAGCTCATATTTGTAGTTTCTTCATTAGGGGAGAGTGTACAAGAGGTGATGAGTGTCCATACCGTCATGAGATGCCTGAAACAGGAGAGTTATCCCAGCAGAACATTAAAGACCGTTATTATGGTGTAAACGATCCAGTTGCGTTGAAGTTACTTGGCAAGGCTGGGGAGATGGGTACTTTGGAATCTCCAGAGGATCAAAGCATCAGAACGCTTTATGTTGGTGGGCTAAACTCGAGAGTCCTTGAGCAAGACATTCGTGATCAATTCTACGCCCATGGAGAAATCGAATCCATCAGAATCTTGGCTGAGAAAGCATGTGCGTTTGTCACTTACACAACCCGAGAAGGAGCAGAGAAAGCTGCAGAAGAGCTCAGTAACAGGCTAGTTGTCAACGGTCAGAGGCTAAAACTCACATGGGGAAGACCTCAGGTTCCCAAACCTGATCAAGATGGTTCTAACCAACAGGGCAGTGTGGCTCATAGTGGTTTACTACCTCGAGCAGTTATATCTCAGCAACAGAATCAACCTCCACCAATGCTACAATACTATATGCACCCACCACCACCACAACCTCCTCATCAAGACAGACCATTTTACCCATCAATGGACCCTCAGAGAATGGGTGCAGTTAGTTCGTCCAAAGAAAGCGGTTCAAGCACCAGTGACAACAGAGGAGCTTCTTCTTCTTCTTACACTATGCCACCACATGGCCACTATCCTCAGCACCAGCCATACCCGCCACCATCATATGGAGGATATATGCAACCACCTTACCAGCAGTATCCTCCTTACCACCATGGCCATTCACAACAAGCTGATCATGATTACCCACAACAACCAGGTCCCGGTTCAAGGCCTAATCCTCCACATCCAAGTTCAGTCTCTGCTCCACCACCTGACTCTGTGTCTGCAGCACCTTCAGGATCCTCTCAGCAATCTGCTGATGCTGCTGTTACTACTGGTTCGTCTCAATAG
Protein Sequence
- >AT2G29580.1
MAHRILRDHEADGWERSDFPIICESCLGDNPYVRMTKANYDKECKICTRPFTVFRWRPGRDARYKKTEVCQTCCKLKNVCQVCLLDLEYGLPVQVRDTALNISTHDSIPKSDVNREFFAEEHDRKTRAGLDYESSFGKIRPNDTIRMLQRTTPYYKRNRAHICSFFIRGECTRGDECPYRHEMPETGELSQQNIKDRYYGVNDPVALKLLGKAGEMGTLESPEDQSIRTLYVGGLNSRVLEQDIRDQFYAHGEIESIRILAEKACAFVTYTTREGAEKAAEELSNRLVVNGQRLKLTWGRPQVPKPDQDGSNQQGSVAHSGLLPRAVISQQQNQPPPMLQYYMHPPPPQPPHQDRPFYPSMDPQRMGAVSSSKESGSSTSDNRGASSSSYTMPPHGHYPQHQPYPPPSYGGYMQPPYQQYPPYHHGHSQQADHDYPQQPGPGSRPNPPHPSSVSAPPPDSVSAAPSGSSQQSADAAVTTGSSQ