Information report for AT2G29570
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
Functional Keywords
Literature and News
- Cell cycle-regulated gene expression in Arabidopsis. DOI: 10.1074/jbc.M207570200 ; PMID: 12169696
- A genome-wide identification of E2F-regulated genes in Arabidopsis. DOI: 10.1046/j.1365-313x.2003.01662.x ; PMID: 12609051
- The age of the Arabidopsis thaliana genome duplication. DOI: 10.1023/a:1023001130337 ; PMID: 12777046
- Genome-wide identification of potential plant E2F target genes. DOI: 10.1104/pp.105.066290 ; PMID: 16126853
- Two cell-cycle regulated SET-domain proteins interact with proliferating cell nuclear antigen (PCNA) in Arabidopsis. DOI: 10.1111/j.1365-313X.2006.02799.x ; PMID: 16771839
- The nanovirus-encoded Clink protein affects plant cell cycle regulation through interaction with the retinoblastoma-related protein. DOI: 10.1128/JVI.02103-06 ; PMID: 17267511
- Genome-wide analysis of the core DNA replication machinery in the higher plants Arabidopsis and rice. DOI: 10.1104/pp.107.101105 ; PMID: 17556508
- The DNA replication checkpoint aids survival of plants deficient in the novel replisome factor ETG1. DOI: 10.1038/emboj.2008.107 ; PMID: 18528439
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Cadmium stress alters gene expression of DNA mismatch repair related genes in Arabidopsis seedlings. DOI: 10.1016/j.chemosphere.2008.07.020 ; PMID: 18722640
- Crystal structures of the Arabidopsis thaliana proliferating cell nuclear antigen 1 and 2 proteins complexed with the human p21 C-terminal segment. DOI: 10.1002/pro.117 ; PMID: 19388052
- A role for PCNA2 in translesion synthesis by Arabidopsis thaliana DNA polymerase eta. DOI: 10.4161/psb.3.10.6544 ; PMID: 19704534
- Arabidopsis brassinosteroid biosynthetic mutant dwarf7-1 exhibits slower rates of cell division and shoot induction. DOI: 10.1186/1471-2229-10-270 ; PMID: 21143877
- Oxidative DNA damage bypass in Arabidopsis thaliana requires DNA polymerase λ and proliferating cell nuclear antigen 2. DOI: 10.1105/tpc.110.081455 ; PMID: 21325140
- Arabidopsis thaliana proliferating cell nuclear antigen has several potential sumoylation sites. DOI: 10.1093/jxb/ers002 ; PMID: 22330895
- RAD5a ubiquitin ligase is involved in ubiquitination of Arabidopsis thaliana proliferating cell nuclear antigen. DOI: 10.1093/jxb/ers368 ; PMID: 23314815
- Arabidopsis thaliana: proliferating cell nuclear antigen 1 and 2 possibly form and hetero-trimeric complexes in the plant cell. DOI: 10.4161/psb.24837 ; PMID: 23656863
- Cell cycle and mismatch repair genes as potential biomarkers in Arabidopsis thaliana seedlings exposed to silver nanoparticles. DOI: 10.1007/s00128-014-1254-1 ; PMID: 24652625
- Similarities and differences between Arabidopsis PCNA1 and PCNA2 in complementing the yeast DNA damage tolerance defect. DOI: 10.1016/j.dnarep.2015.02.003 ; PMID: 25728088
- Arabidopsis PCNAs form complexes with selected D-type cyclins. DOI: 10.3389/fpls.2015.00516 ; PMID: 26379676
- Cell cycle arrest mediated by Cd-induced DNA damage in Arabidopsis root tips. DOI: 10.1016/j.ecoenv.2017.07.074 ; PMID: 28800532
- A crystallization and preliminary X-ray diffraction study of the Arabidopsis thaliana proliferating cell nuclear antigen (PCNA2) alone and in a complex with a PIP-box peptide from Flap endonuclease 1. DOI: 10.18388/abp.2020_2896 ; PMID: 32188236
- Arabidopsis TCP20 links regulation of growth and cell division control pathways. DOI: 10.1073/pnas.0504039102 ; PMID: 16123132
- Arabidopsis thaliana Y-family DNA polymerase eta catalyses translesion synthesis and interacts functionally with PCNA2. DOI: 10.1111/j.1365-313X.2008.03562.x ; PMID: 18494853
- Analysis of the Arabidopsis cytosolic proteome highlights subcellular partitioning of central plant metabolism. DOI: 10.1021/pr1009433 ; PMID: 21166475
- Analysis of protein complexes in Arabidopsis leaves using size exclusion chromatography and label-free protein correlation profiling. DOI: 10.1016/j.jprot.2017.06.004 ; PMID: 28627464
Gene Resources
- UniProt: A0A6B7JDQ4
- EMBL: MK424845
- AlphaFoldDB: A0A6B7JDQ4
- EnsemblPlants: AT2G29570.1
- Gramene: AT2G29570.1
- KEGG: ath:AT2G29570
- Orthologous matrix: AATKFKY
- ExpressionAtlas: AT2G29570
- InterPro: IPR000730, IPR022648, IPR022649
- PANTHER: PTHR11352, PTHR11352:SF0
- SUPFAM: SSF55979
- PROSITE: PS00293, PS01251
- Gene3D: 3.70.10.10
- OrthoDB: A0A6B7JDQ4
- SWISS-MODEL: A0A6B7JDQ4
- Conserved Domain Database: cd00577
Homologs
- Oryza sativa OsPCNA;PCNA
Sequences
cDNA Sequence
- >AT2G29570.1
AAAAATACCCTAAAATCGCTAAATGGCGCCACAAAATCTCAGCTTATAATATCACTTCCCGCTAACAATTGCAATCTCCTCCCAGAAATTTCAACAGCTCTAAAAACCCTAACCGTTTCGATTCACACTCTAACCTTTCGATAATTTCCCAGAAGATGTTGGAGCTTCGTTTAGTTCAAGGTTCTCTACTGAAGAAGGTTCTAGAAGCGGTCAAAGATCTGGTGAACGATGCGAACTTCGACTGTTCGACCACAGGGTTCTCGCTTCAAGCTATGGATTCGAGCCATGTCGCGTTGGTGTCTCTTTTGCTTAGATCTGAAGGTTTCGAGCACTATAGATGCGATAGGAACCTCTCTATGGGAATGAATCTTGGTAATATGTCTAAGATGCTGAAATGTGCTGGAAATGATGATATCATCACCATCAAAGCTGATGATGGTAGCGACACTGTTACTTTCATGTTTGAGAGTCCCACACAAGACAAGATTGCAGATTTTGAGATGAAGCTGATGGATATCGACAGTGAGCATTTAGGAATTCCTGATGCTGAGTACCACTCGATTGTGAGAATGCCTTCTGGTGAATTTTCCAGGATATGCAAAGATCTCAGTAGCATTGGTGACACAGTTGTGATCTCGGTAACAAAAGAAGGGGTGAAGTTTTCAACAGCAGGTGATATCGGGACAGCAAACATTGTGCTCAGGCAGAATACTACCGTCGACAAACCTGAAGATGCTATTGTGATAGAGATGAACGAGCCTGTTTCGCTTTCATTTGCATTGAGGTACATGAACTCCTTCACAAAGGCTACTCCATTGTCGGAAACTGTGACCATCAGTTTGTCCTCTGAGTTACCGGTCGTGGTGGAGTACAAGGTGGCTGAGATGGGTTACATTCGATACTATCTGGCGCCTAAGATTGAAGAAGAAGAAGACACCAAACCAGAATAATGATGAATGTTTGATAGTCTTCGTTCGAGTCCTTTGTTGAAATGTCTGTCTTGATTCAGTTGTTTTCTGGATTTACTATCTTAAGGCAATGCTAAACTAGATAATCGTATGATGTTTGTCTTTCTGAAATTTGGAAAAGCTTGTTTATAACACTTTTCATCTGTTTGTTAAACATTGAAGAAAAAGAAGACACGAAGCCCTAAAACACGTTTGTTTGTGGCTTCTGCAACCTC
CDS Sequence
- >AT2G29570.1
ATGTTGGAGCTTCGTTTAGTTCAAGGTTCTCTACTGAAGAAGGTTCTAGAAGCGGTCAAAGATCTGGTGAACGATGCGAACTTCGACTGTTCGACCACAGGGTTCTCGCTTCAAGCTATGGATTCGAGCCATGTCGCGTTGGTGTCTCTTTTGCTTAGATCTGAAGGTTTCGAGCACTATAGATGCGATAGGAACCTCTCTATGGGAATGAATCTTGGTAATATGTCTAAGATGCTGAAATGTGCTGGAAATGATGATATCATCACCATCAAAGCTGATGATGGTAGCGACACTGTTACTTTCATGTTTGAGAGTCCCACACAAGACAAGATTGCAGATTTTGAGATGAAGCTGATGGATATCGACAGTGAGCATTTAGGAATTCCTGATGCTGAGTACCACTCGATTGTGAGAATGCCTTCTGGTGAATTTTCCAGGATATGCAAAGATCTCAGTAGCATTGGTGACACAGTTGTGATCTCGGTAACAAAAGAAGGGGTGAAGTTTTCAACAGCAGGTGATATCGGGACAGCAAACATTGTGCTCAGGCAGAATACTACCGTCGACAAACCTGAAGATGCTATTGTGATAGAGATGAACGAGCCTGTTTCGCTTTCATTTGCATTGAGGTACATGAACTCCTTCACAAAGGCTACTCCATTGTCGGAAACTGTGACCATCAGTTTGTCCTCTGAGTTACCGGTCGTGGTGGAGTACAAGGTGGCTGAGATGGGTTACATTCGATACTATCTGGCGCCTAAGATTGAAGAAGAAGAAGACACCAAACCAGAATAA
Protein Sequence
- >AT2G29570.1
MLELRLVQGSLLKKVLEAVKDLVNDANFDCSTTGFSLQAMDSSHVALVSLLLRSEGFEHYRCDRNLSMGMNLGNMSKMLKCAGNDDIITIKADDGSDTVTFMFESPTQDKIADFEMKLMDIDSEHLGIPDAEYHSIVRMPSGEFSRICKDLSSIGDTVVISVTKEGVKFSTAGDIGTANIVLRQNTTVDKPEDAIVIEMNEPVSLSFALRYMNSFTKATPLSETVTISLSSELPVVVEYKVAEMGYIRYYLAPKIEEEEDTKPE