Information report for AT2G29540
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
Functional Keywords
Literature and News
- A 14-kDa Arabidopsis thaliana RNA polymerase III subunit contains two alpha-motifs flanked by a highly charged C terminus. DOI: 10.1016/0378-1119(96)00030-3 ; PMID: 8682305
- Combinatorial microarray analysis revealing arabidopsis genes implicated in cytokinin responses through the His->Asp Phosphorelay circuitry. DOI: 10.1093/pcp/pci033 ; PMID: 15695462
- Purification of a plant mediator from Arabidopsis thaliana identifies PFT1 as the Med25 subunit. DOI: 10.1016/j.molcel.2007.05.007 ; PMID: 17560376
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
Gene Resources
- UniProt: Q42483
- EMBL: AC004561, AK118945, BT004959
- AlphaFoldDB: Q42483
- EnsemblPlants: AT2G29540.1, AT2G29540.2
- Gramene: AT2G29540.1, AT2G29540.2
- Orthologous matrix: MRIQMYD
- ExpressionAtlas: AT2G29540
- InterPro: IPR008193, IPR009025, IPR022905
- PANTHER: PTHR13946, PTHR13946:SF28
- SUPFAM: SSF55257
- PROSITE: PS01154
- Gene3D: 3.30.1360.10
- SWISS-MODEL: Q42483
- Conserved Domain Database: cd07029
Sequences
cDNA Sequence
- >AT2G29540.1
CTTCTTTCTTACTCTCTCAACTTTTTTTGCTGAAATTTTCTTCAATTTCGAGTTTTTCTTTGTGGGTTTGTTTAGCTATTCAAAGCTTTCAATTGAAGTCGTTCTCTTTCTGTGTTTTCTAGTTGGTGGTGGATTTTTGATTTTGAGTTAAGGAATTGAGTAGCAAGAAGGTGAGATATGGAGCACGGTTCGTTCACGAATGTTAGTCATGCTTCGTTTACTTTATCGGAAGAAGATCACACACTTGCTAATGCTGTTAGATTCGTCTTAAACCAAGATCCCAGAGTAACCGTGGCTGCATACACCATCCCACATCCTTCCCTTGAACAGGTCAATATCCGGGTCCAGACAACAGGTGATCCAGCAAGAGAGGTTTTTAAAGATGCATGTCAAGAGCTCATGCAAATGAACAGACATGTGAGAAGCGTTTTTGATAAGGCTGTTGCTGAGTATAAGGATGAACAAAAGCGTAAGGAGGAGGCTGAAGAAGAAGAGCTTAAGAGGCAGAGGGATCTATTTGGGTCCATGGACATTGAAAACAACTGATAACCATTGTATTCTCCTATGGAGTTTATACTATTTTTATCTTAAATCCAGATTCGTCCTTCAAATTGACTCGTCAAATTCATAATCCACACCAAAATTTAACCAAGAAGATTCTTATATTGCTTATAACCATTGTCACTACTACTCTGCTTCTTATATTTGAAAGATGGTGAAGTCTTCACCGAATTCACATAGTCAAAATTAACAAAAGGTTATATAATGAAACAAAGAAAAAAAATACTATGGATGGATTTTGATTTAGCAAAATAGATTGTTTGAATATTGATTGATAAATCCTCTTAGCCTACGCAGAGTATCATAACTACTAATAACGCAAGCGATAGTTACAGAAACTATAAGAACTTAATAGAAGAGAGTTTTAAAAGTAAACAGCAACTGGAAGTTGAGGTGTTCTTATCATCTGTTTCTTCAATAAGTTTCTTCTTGCTCGTACTCA - >AT2G29540.3
CTTCTTTCTTACTCTCTCAACTTTTTTTGCTGAAATTTTCTTCAATTTCGAGTTTTTCTTTGTGGGTTTGTTTAGCTATTCAAAGCTTTCAATTGAAGTCGTTCTCTTTCTGTGTTTTCTAGTTGGTGGTGGATTTTTGATTTTGAGTTAAGGAATTGAGTAGCAAGAAGGTGAGATATGGAGCACGGTTCGTTCACGAATGTTAGTCATGCTTCGTTTACTTTATCGGAAGAAGATCACACACTTGCTAATGCTGTTAGATTCGTCTTAAACCAAGATCCCAGAGTAACCGTGGCTGCATACACCATCCCACATCCTTCCCTTGAACAGGTCAATATCCGGGTCCAGACAACAGGTGATCCAGCAAGAGAGGTTTTTAAAGATGCATGTCAAGAGCTCATGCAAATGAACAGACATGTGAGAAGCGTTTTTGATAAGGCTGTTGCTGAGTATAAGGATGAACAAAAGCGTAAGGAGGAGGCTGAAGAAGAAGAGCTTAAGAGGCAGAGGGATCTATTTGGGTCCATGGACATTGAAAACAACTGATAACCATTGTATTCTCCTATGGAGTTTATACTATTTTTATCTTAAATCCAGATTCGTCCTTCAAATTGACTCGTCAAATTCATAATCCACACCAAAATTTAACCAAGAAGATTCTTATATTGCTTATAACCATTGTCACTACTACTCTGCTTCTTATATTTGAAAGATGGTGAAGTCTTCACCGAATTCACATAGTCAAAATTAACAAAAGGTTATATAATGAAACAAAGAAAAAAAATACTATGGATGGATTTTGATTTAGCAAAATAGATTGTTTGAATATTGATTGATAAATCCTCTTAGCCTACGCAGAGTATCATAACTACTAATAACGCAAGCGATAGTTACAGAAACTATAAGAACTTAATAGAAGAGAGTTTTAAAAGTAAACAGCAACTGGAAGTTGAGGTGTTCTTATCATCTGTTTCTTCAATAAGTTTCTTCTTGCTCGTACTCA - >AT2G29540.2
CTTCTTTCTTACTCTCTCAACTTTTTTTGCTGAAATTTTCTTCAATTTCGAGTTTTTCTTTGTGGGTTTGTTTAGCTATTCAAAGCTTTCAATTGAAGTCGTTCTCTTTCTGTGTTTTCTAGTTGGTGGTGGATTTTTGATTTTGAGTTAAGGAATTGAGTAGCAAGAAGGTGAGATATGGAGCACGGTTCGTTCACGAATGTTAGTCATGCTTCGTTTACTTTATCGGAAGAAGATCACACACTTGCTAATGCTGTTAGATTCGTCTTAAACCAAGATCCCAGAGTAACCGTGGCTGCATACACCATCCCACATCCTTCCCTTGAACAGGTCAATATCCGGGTCCAGACAACAGGTGATCCAGCAAGAGAGGTTTTTAAAGATGCATGTCAAGAGCTCATGCAAATGAACAGACATGTGAGAAGCGTTTTTGATAAGGCTGTTGCTGAGTATAAGGATGAACAAAAGCGTAAGGAGGAGGCTGAAGAAGAAGAGCTTAAGAGGCAGAGGGATCTATTTGGGTCCATGGACATTGAAAACAACTGATAACCATTGTATTCTCCTATGGAGTTTATACTATTTTTATCTTAAATCCAGATTCGTCCTTCAAATTGACTCGTCAAATTCATAATCCACACCAAAATTTAACCAAGAAGATTCTTATATTGCTTATAACCATTGTCACTACTACTCTGCTTCTTATATTTGAAAGATGGTGAAGTCTTCACCGAATTCACATAGTCAAAATTAACAAAAGGTTATATAATGAAACAAAGAAAAAAAATACTATGGATGGATTTTGATTTAGCAAAATAGATTGTTTGAATATTGATTGATAAATCCTCTTAGCCTACGCAGAGTATCATAACTACTAATAACGCAAGCGATAGTTACAGAAACTATAAGAACTTAATAGAAGAGAGTTTTAAAAGTAAACAGCAACTGGAAGTTGAGGTGTTCTTATCATCTGTTTCTTCAATAAGTTTCTTCTTGCTCGTACTCA
CDS Sequence
- >AT2G29540.1
ATGGAGCACGGTTCGTTCACGAATGTTAGTCATGCTTCGTTTACTTTATCGGAAGAAGATCACACACTTGCTAATGCTGTTAGATTCGTCTTAAACCAAGATCCCAGAGTAACCGTGGCTGCATACACCATCCCACATCCTTCCCTTGAACAGGTCAATATCCGGGTCCAGACAACAGGTGATCCAGCAAGAGAGGTTTTTAAAGATGCATGTCAAGAGCTCATGCAAATGAACAGACATGTGAGAAGCGTTTTTGATAAGGCTGTTGCTGAGTATAAGGATGAACAAAAGCGTAAGGAGGAGGCTGAAGAAGAAGAGCTTAAGAGGCAGAGGGATCTATTTGGGTCCATGGACATTGAAAACAACTGA - >AT2G29540.3
ATGGAGCACGGTTCGTTCACGAATGTTAGTCATGCTTCGTTTACTTTATCGGAAGAAGATCACACACTTGCTAATGCTGTTAGATTCGTCTTAAACCAAGATCCCAGAGTAACCGTGGCTGCATACACCATCCCACATCCTTCCCTTGAACAGGTCAATATCCGGGTCCAGACAACAGGTGATCCAGCAAGAGAGGTTTTTAAAGATGCATGTCAAGAGCTCATGCAAATGAACAGACATGTGAGAAGCGTTTTTGATAAGGCTGTTGCTGAGTATAAGGATGAACAAAAGCGTAAGGAGGAGGCTGAAGAAGAAGAGCTTAAGAGGCAGAGGGATCTATTTGGGTCCATGGACATTGAAAACAACTGA - >AT2G29540.2
ATGGAGCACGGTTCGTTCACGAATGTTAGTCATGCTTCGTTTACTTTATCGGAAGAAGATCACACACTTGCTAATGCTGTTAGATTCGTCTTAAACCAAGATCCCAGAGTAACCGTGGCTGCATACACCATCCCACATCCTTCCCTTGAACAGGTCAATATCCGGGTCCAGACAACAGGTGATCCAGCAAGAGAGGTTTTTAAAGATGCATGTCAAGAGCTCATGCAAATGAACAGACATGTGAGAAGCGTTTTTGATAAGGCTGTTGCTGAGTATAAGGATGAACAAAAGCGTAAGGAGGAGGCTGAAGAAGAAGAGCTTAAGAGGCAGAGGGATCTATTTGGGTCCATGGACATTGAAAACAACTGA
Protein Sequence
- >AT2G29540.1
MEHGSFTNVSHASFTLSEEDHTLANAVRFVLNQDPRVTVAAYTIPHPSLEQVNIRVQTTGDPAREVFKDACQELMQMNRHVRSVFDKAVAEYKDEQKRKEEAEEEELKRQRDLFGSMDIENN - >AT2G29540.3
MEHGSFTNVSHASFTLSEEDHTLANAVRFVLNQDPRVTVAAYTIPHPSLEQVNIRVQTTGDPAREVFKDACQELMQMNRHVRSVFDKAVAEYKDEQKRKEEAEEEELKRQRDLFGSMDIENN - >AT2G29540.2
MEHGSFTNVSHASFTLSEEDHTLANAVRFVLNQDPRVTVAAYTIPHPSLEQVNIRVQTTGDPAREVFKDACQELMQMNRHVRSVFDKAVAEYKDEQKRKEEAEEEELKRQRDLFGSMDIENN