Information report for AT2G29500
Gene Details
|
|
Functional Descriptions
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
- PO:0025195 — pollen tube cell — célula del tubo polínico (Spanish, exact), 花粉管細胞 (Japanese, exact)
Functional Keywords
Literature and News
- Cell cycle-regulated gene expression in Arabidopsis. DOI: 10.1074/jbc.M207570200 ; PMID: 12169696
- Global changes in gene expression in response to high light in Arabidopsis. DOI: 10.1104/pp.005595 ; PMID: 12427978
- Cross-species microarray transcript profiling reveals high constitutive expression of metal homeostasis genes in shoots of the zinc hyperaccumulator Arabidopsis halleri. DOI: 10.1046/j.1365-313x.2003.01959.x ; PMID: 14690509
- Microarray expression analyses of Arabidopsis guard cells and isolation of a recessive abscisic acid hypersensitive protein phosphatase 2C mutant. DOI: 10.1105/tpc.019000 ; PMID: 14973164
- Harpin inactivates mitochondria in Arabidopsis suspension cells. DOI: 10.1094/MPMI.2004.17.2.131 ; PMID: 14964527
- Changes in gene expression in response to altered SHL transcript levels. DOI: 10.1023/B:PLAN.0000023661.65248.4b ; PMID: 15082927
- When defense pathways collide. The response of Arabidopsis to a combination of drought and heat stress. DOI: 10.1104/pp.103.033431 ; PMID: 15047901
- Plant body weight-induced secondary growth in Arabidopsis and its transcription phenotype revealed by whole-transcriptome profiling. DOI: 10.1104/pp.104.038844 ; PMID: 15194820
- Transcriptional divergence of the duplicated oxidative stress-responsive genes in the Arabidopsis genome. DOI: 10.1111/j.1365-313X.2004.02295.x ; PMID: 15634198
- Expression profiling reveals COI1 to be a key regulator of genes involved in and methyl jasmonate-induced secondary metabolism, defence, and hormone interactions. DOI: 10.1007/s11103-005-7306-5 ; PMID: 16021335
- Genome-wide analysis of transcript abundance and translation in Arabidopsis seedlings subjected to oxygen deprivation. DOI: 10.1093/aob/mci217 ; PMID: 16081496
- The zinc-finger protein Zat12 plays a central role in reactive oxygen and abiotic stress signaling in Arabidopsis. DOI: 10.1104/pp.105.068254 ; PMID: 16183833
- Pollen development and fertilization in Arabidopsis is dependent on the MALE GAMETOGENESIS IMPAIRED ANTHERS gene encoding a type V P-type ATPase. DOI: 10.1101/gad.357305 ; PMID: 16291648
- Identification and characterization of a stress-inducible and a constitutive small heat-shock protein targeted to the matrix of plant peroxisomes. DOI: 10.1104/pp.105.073841 ; PMID: 16531488
- Genome-wide expression profiling of ARABIDOPSIS RESPONSE REGULATOR 7(ARR7) overexpression in cytokinin response. DOI: 10.1007/s00438-006-0177-x ; PMID: 17061125
- Arabidopsis heat shock transcription factor A2 as a key regulator in response to several types of environmental stress. DOI: 10.1111/j.1365-313X.2006.02889.x ; PMID: 17059409
- A mutation affecting ASCORBATE PEROXIDASE 2 gene expression reveals a link between responses to high light and drought tolerance. DOI: 10.1111/j.1365-3040.2005.01419.x ; PMID: 17080642
- Systemic and intracellular responses to photooxidative stress in Arabidopsis. DOI: 10.1105/tpc.106.045898 ; PMID: 18156220
- and extracellular-sourced ROS on high light-responsive gene expression in Arabidopsis. DOI: 10.1093/jxb/erm289 ; PMID: 18212028
- Heat-shock response in Arabidopsis thaliana explored by multiplexed quantitative proteomics using differential metabolic labeling. DOI: 10.1021/pr0705340 ; PMID: 18189342
- Global transcript levels respond to small changes of the carbon status during progressive exhaustion of carbohydrates in Arabidopsis rosettes. DOI: 10.1104/pp.107.115592 ; PMID: 18305208
- The Arabidopsis SDG4 contributes to the regulation of pollen tube growth by methylation of histone H3 lysines 4 and 36 in mature pollen. DOI: 10.1016/j.ydbio.2007.12.016 ; PMID: 18252252
- General detoxification and stress responses are mediated by oxidized lipids through TGA transcription factors in Arabidopsis. DOI: 10.1105/tpc.107.054809 ; PMID: 18334669
- Microarray expression profiling of Arabidopsis thaliana L. in response to allelochemicals identified in buckwheat. DOI: 10.1093/jxb/ern168 ; PMID: 18603616
- Transcriptional profiling of pea ABR17 mediated changes in gene expression in Arabidopsis thaliana. DOI: 10.1186/1471-2229-8-91 ; PMID: 18783601
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- A subcellular localization compendium of hydrogen peroxide-induced proteins. DOI: 10.1111/j.1365-3040.2011.02323.x ; PMID: 21443605
- The AtHSP17.4C1 Gene Expression Is Mediated by Diverse Signals that Link Biotic and Abiotic Stress Factors with ROS and Can Be a Useful Molecular Marker for Oxidative Stress. DOI: 10.3390/ijms20133201 ; PMID: 31261879
- Transcriptional divergence of the duplicated oxidative stress-responsive genes in the Arabidopsis genome. DOI: 10.1111/j.1365-313X.2004.02295.x ; PMID: 15634198
- Arabidopsis heat shock transcription factor A2 as a key regulator in response to several types of environmental stress. DOI: 10.1111/j.1365-313X.2006.02889.x ; PMID: 17059409
- General detoxification and stress responses are mediated by oxidized lipids through TGA transcription factors in Arabidopsis. DOI: 10.1105/tpc.107.054809 ; PMID: 18334669
Gene Resources
- UniProt: A0A178VX53
- EMBL: CACRSJ010000105, CACSHJ010000088, LR881467
- AlphaFoldDB: A0A178VX53
- EnsemblPlants: AT2G29500.1
- Gramene: AT2G29500.1
- KEGG: ath:AT2G29500
- Orthologous matrix: WHIRERR
- ExpressionAtlas: AT2G29500
- InterPro: IPR002068, IPR008978, IPR031107
- PANTHER: PTHR11527
- SUPFAM: SSF49764
- PROSITE: PS01031
- Gene3D: 2.60.40.790
- OrthoDB: A0A178VX53
- SWISS-MODEL: A0A178VX53
- Conserved Domain Database: cd06472
Homologs
- Juglans regia WALNUT_00030998-RA
- Medicago truncatula Medtr4g093080, Medtr4g093140
- Oryza sativa OsHSP17.0, Oshsp16.9, OsHSP17.7, OsHSP16.9C, OsHsp18.0-CI;Oshsp18.0, Oshsp26, OsHSP18.2;Oshsp18.0-CII
- Triticum aestivum Mds-1
Sequences
cDNA Sequence
- >AT2G29500.1
TGTTTTAGATTTTATGGATAGTGTGATTAGAGTCCAATTATTTTGGAATTTAATTCGGTTAACCAGTCGAACCGGATAATCTGTAGAAATCCAGTTTTTTTTTTGGAAGACTACATATTTGTCTAAAGCCCATGAAGGCCCATTAAACCCAACGAACACAAACAATCTTCAAAATGCTCCTAGAATTTTCTGGATTCACCTGATTTTTCTCATAGACGTCCTCTAGATGTTTCTGTATTCCCCATAACAACTCGAGAAGCTCGAGAAATTTCGGTTAGTACCTTTAAATAGCTTCAAAAATCCTTCGTGTGTTCTATCAGAAATCGAAAAATCAAAGTTCTCAAGAAGATATCAACAAAAAAAAAAGTAAATTCTTTAAAATGTCGATGATTCCAAGTTTCTTCAACAACAACAGACGAAGCAACATCTTTGATCCATTCTCTCTTGACGTATGGGATCCATTCAAGGAACTAACATCATCATCACTTTCTCGTGAGAACTCAGCGATCGTGAACGCACGTGTGGACTGGAGAGAGACGCCTGAGGCCCACGTGTTTAAAGCTGACTTGCCTGGATTGAAGAAGGAGGAAGTTAAAGTTGAGATTGAGGAGGATAGTGTTTTGAAGATCAGTGGAGAGAGACACGTGGAGAAAGAAGATAAGAATGACACGTGGCACCGTGTGGAGAGATCGAGTGGACAGTTTACGAGGAGGTTTAGGTTGCCGGAGAATGTGAAGATGGATCAGGTTAAGGCTGCGATGGAGAATGGTGTGTTGACTGTTACGGTGCCTAAGGCTGAGACTAAGAAGGCTGATGTTAAGTCTATTCAGATCTCTGGTTGAGTAATGGGTTCGAGTTTTATCATCGGAGTTGCTTGTGTTTTTGTCATGGTTATGGTTCATGTTTTACTTGAGTGTGTGAGTACTCTATCTAAATTATAATAATCTCCGATTGAGCTATGAATTATGATGTATCGGATACATTTGATCCTAATGAAGTATGGAATAAATAATAATTATTAACCTTTGTCTAAATTCAAAAGAAGTTTAACCGACG
CDS Sequence
- >AT2G29500.1
ATGTCGATGATTCCAAGTTTCTTCAACAACAACAGACGAAGCAACATCTTTGATCCATTCTCTCTTGACGTATGGGATCCATTCAAGGAACTAACATCATCATCACTTTCTCGTGAGAACTCAGCGATCGTGAACGCACGTGTGGACTGGAGAGAGACGCCTGAGGCCCACGTGTTTAAAGCTGACTTGCCTGGATTGAAGAAGGAGGAAGTTAAAGTTGAGATTGAGGAGGATAGTGTTTTGAAGATCAGTGGAGAGAGACACGTGGAGAAAGAAGATAAGAATGACACGTGGCACCGTGTGGAGAGATCGAGTGGACAGTTTACGAGGAGGTTTAGGTTGCCGGAGAATGTGAAGATGGATCAGGTTAAGGCTGCGATGGAGAATGGTGTGTTGACTGTTACGGTGCCTAAGGCTGAGACTAAGAAGGCTGATGTTAAGTCTATTCAGATCTCTGGTTGA
Protein Sequence
- >AT2G29500.1
MSMIPSFFNNNRRSNIFDPFSLDVWDPFKELTSSSLSRENSAIVNARVDWRETPEAHVFKADLPGLKKEEVKVEIEEDSVLKISGERHVEKEDKNDTWHRVERSSGQFTRRFRLPENVKMDQVKAAMENGVLTVTVPKAETKKADVKSIQISG