Information report for AT2G29290
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
Functional Keywords
Literature and News
- Expression profiling of cytokinin action in Arabidopsis. DOI: 10.1104/pp.103.021436 ; PMID: 12913156
- Transcriptome analysis of O3-exposed Arabidopsis reveals that multiple signal pathways act mutually antagonistically to induce gene expression. DOI: 10.1023/B:PLAN.0000019064.55734.52 ; PMID: 15010611
- Transcript profiling in Arabidopsis reveals complex responses to global inhibition of DNA methylation and histone deacetylation. DOI: 10.1074/jbc.M409053200 ; PMID: 15516340
- Systemic signalling of environmental cues in Arabidopsis leaves. DOI: 10.1093/jxb/erj033 ; PMID: 16330523
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- BAIUCAS: a novel BLAST-based algorithm for the identification of upstream open reading frames with conserved amino acid sequences and its application to the Arabidopsis thaliana genome. DOI: 10.1093/bioinformatics/bts303 ; PMID: 22618534
- Experimental Verification and Evolutionary Origin of 5'-UTR Polyadenylation Sites in Arabidopsis thaliana. DOI: 10.3389/fpls.2018.00969 ; PMID: 30026753
- OXS2 is Required for Salt Tolerance Mainly through Associating with Salt Inducible Genes, CA1 and Araport11, in Arabidopsis. DOI: 10.1038/s41598-019-56456-1 ; PMID: 31889067
Gene Resources
- UniProt: A0A178VX70
- EMBL: CACRSJ010000105, CACSHJ010000088, LUHQ01000002
- AlphaFoldDB: A0A178VX70
- EnsemblPlants: AT2G29290.2
- Gramene: AT2G29290.2
- KEGG: ath:AT2G29290
- Orthologous matrix: ICPLATM
- ExpressionAtlas: AT2G29290
- InterPro: IPR002347, IPR020904, IPR036291
- PANTHER: PTHR42898, PTHR42898:SF84
- SUPFAM: SSF51735
- PROSITE: PS00061
- Gene3D: 3.40.50.720
- OrthoDB: A0A178VX70
- SWISS-MODEL: A0A178VX70
Homologs
- Malus domestica MDP0000247912, MDP0000304669
- Nicotiana tabacum XP_016491803.1
- Oryza sativa KAR, OsPLS4, OsABA2, OsHSD1;LGF1, MAS;OsMAS
- Ricinus communis 29844.t000184
- Solanum lycopersicum Solyc04g007400.3
- Solanum tuberosum Soltu.DM.04G009040
Sequences
cDNA Sequence
- >AT2G29290.2
AAGCTCTTGTTAGTTATGTGATAGATAAAGATGGATAACAGCCGATGGAGTCTTCAAGGTATGACTGCTCTTCTGACCGGTGGAGCGGGAGGAATTGGGCATGCCATAGTAGAGGAGCTAGCTGGTTTTGGGCCAAAGTCCATGTATCCGACATATCTGAAACACTGCTCAATCAAAGTTTAAGCGAATGGGAAAAGAAAGGATTTCAAGTGAGTGGTACAATCTGTGATGTATCCTCTCGTCCGGAGAGAGAAACACTCTGCAAACTGTCTCCTCGTTGTTTGAGGGCAAGCTCAACATTCTTGTAAGACGTTTGTGAGTGAAGTTAATGGAAATGACAATGAGCAAGTTTTGCTCAAATATTTTGACTATAAAATGTCAATTTTGGTTAGGACCACTATCTTAGATTTTTTTCATCTTCACTCGTAAGGCTACGTATTATTTCCACCACACATACAAAGATAATCACTAGATTCATACTTATCCGTTCCACATTCATTGTATATACAAAATCTGTGGCATTTCTGGTCACTTCAAGTAAGATACAAGAAAAAATGGATAAAAGATGGAGTCTTCAAGGTATGAATGCTCTTGTGACCGGTGGCACTAAAGGCATCGGGGAAGCTGTTGTGGAGGAACTGTCAATTTTGGGAGCAAGAGTCCACACATGTGCTAGAGACGAGACTCAGCTTCAAGAACGTTTACGTGAATGGCAAGAAAAAGGGTTTCAGGTCACCACTTCTATCTGCGACGTTTCTTTGCGTGAGCAACGAGAGAAACTCATGGAAACCGTTTCCTCTCTCTTCCAAGGAAAACTCAACATCCTCGTGAACAATGTGGGAACGTTAATGCTCAAGCCGACCACAGAGTATACAGCAGAAGAATTCTCGTTTCTTATGGCTACAAATCTCGACTCAGCTTTCCATATTTCACAGCTTGCGCACCCTTTGTTGAAAGCCTCTGGCTCAGGGAGCATTGTGCTCATGTCCTCTATTGCCGGAGTCGTGCATGTCGGTGTTGGATCCATCTATGGAGCAACAAAAGGAGCCATGAATCAGTTGGCTAGAAACTTAGCTTGCGAATGGGCAAGCGACAACATAAGGACTAACGCTATTTGTCCATGGTTAATCACAACTCCTTTGATTAGTGATCTTCTCAGTGTTGAGGAGATGAAAAAAGAAGCAGAGGAAAGGACACCCATGGGGCGTGTGGGAGAGGCAAATGAAGTCTCACCGCTTGTGGCATTTCTTTGTCTTCCTGCAGCTTCTTATATTACTGGTCAAGTCATTTGTGTTGATGGAGGTCTCACTGTTAATGGCTTCTCCTATCAGCCACATGCTTGAGCTAGGTCTGTGTTGTGTGTATTGTCCAATGAAAACAGTAAACCAAACAATAACATCGGAAAATGAATGATTTGAATATTTAGGTTAAGCCTTAAAACTAAATTCATTTTGGTATGTTGACATATTGTAAAACGTAATGAACAAGAAACCTTAACAGAAGATGTTTCTTTTAAGAGTACACGAGCCTTGCAGAAACAGAACACAAGTTGAACTCAAATGAGAAGATGGGCTTCGACACTCATCAACTTACAATGCTCAGTTGATCAAGCACAAAGACAGAATCATGCAATGATGACTCAAAAGGACAGATGGCTTCACTGTTGAAGATTTTGACTATATGTCATTTTTTGCTTGGGACACTTCGATATTTTAGTCATGTTTTCTAACATACGACTACATAGTTTCTCAACATGCCACGTACAAACAAGACAACAAACTCATTAATTCATACTTATCTGGATTCTGATCCACATTTACTGTATACATAATT - >AT2G29290.1
AAGCTCTTGTTAGTTATGTGATAGATAAAGATGGATAACAGCCGATGGAGTCTTCAAGGTATGACTGCTCTTCTGACCGGTGGAGCGGGAGGAATTGGGCATGCCATAGTAGAGGAGCTAGCTGGTTTTGGGCCAAAGTCCATGTATCCGACATATCTGAAACACTGCTCAATCAAAGTTTAAGCGAATGGGAAAAGAAAGGATTTCAAGTGAGTGGTACAATCTGTGATGTATCCTCTCGTCCGGAGAGAGAAACACTCTGCAAACTGTCTCCTCGTTGTTTGAGGGCAAGCTCAACATTCTTGTAAGACGTTTGTGAGTGAAGTTAATGGAAATGACAATGAGCAAGTTTTGCTCAAATATTTTGACTATAAAATGTCAATTTTGGTTAGGACCACTATCTTAGATTTTTTTCATCTTCACTCGTAAGGCTACGTATTATTTCCACCACACATACAAAGATAATCACTAGATTCATACTTATCCGTTCCACATTCATTGTATATACAAAATCTGTGGCATTTCTGGTCACTTCAAGTAAGATACAAGAAAAAATGGATAAAAGATGGAGTCTTCAAGGTATGAATGCTCTTGTGACCGGTGGCACTAAAGGCATCGGGGAAGCTGTTGTGGAGGAACTGTCAATTTTGGGAGCAAGAGTCCACACATGTGCTAGAGACGAGACTCAGCTTCAAGAACGTTTACGTGAATGGCAAGAAAAAGGGTTTCAGGTCACCACTTCTATCTGCGACGTTTCTTTGCGTGAGCAACGAGAGAAACTCATGGAAACCGTTTCCTCTCTCTTCCAAGGAAAACTCAACATCCTCGTGAACAATGTGGGAACGTTAATGCTCAAGCCGACCACAGAGTATACAGCAGAAGAATTCTCGTTTCTTATGGCTACAAATCTCGACTCAGCTTTCCATATTTCACAGCTTGCGCACCCTTTGTTGAAAGCCTCTGGCTCAGGGAGCATTGTGCTCATGTCCTCTATTGCCGGAGTCGTGCATGTCGGTGTTGGATCCATCTATGGAGCAACAAAAGGAGCCATGAATCAGTTGGCTAGAAACTTAGCTTGCGAATGGGCAAGCGACAACATAAGGACTAACGCTATTTGTCCATGGTTAATCACAACTCCTTTGATTAGTGATCTTCTCAGTGTTGAGGAGATGAAAAAAGAAGCAGAGGAAAGGACACCCATGGGGCGTGTGGGAGAGGCAAATGAAGTCTCACCGCTTGTGGCATTTCTTTGTCTTCCTGCAGCTTCTTATATTACTGGTCAAGTCATTTGTGTTGATGGAGGTCTCACTGTTAATGGCTTCTCCTATCAGCCACATGCTTGAGCTAGGTCTGTGTTGTGTGTATTGTCCAATGAAAACAGTAAACCAAACAATAACATCGGAAAATGAATGATTTGAATATTTAGGTTAAGCCTTAAAACTAAATTCATTTTGGTATGTTGACATATTGTAAAACGTAATGAACAAGAAACCTTAACAGAAGATGTTTCTTTTAAGAGTACACGAGCCTTGCAGAAACAGAACACAAGTTGAACTCAAATGAGAAGATGGGCTTCGACACTCATCAACTTACAATGCTCAGTTGATCAAGCACAAAGACAGAATCATGCAATGATGACTCAAAAGGACAGATGGCTTCACTGTTGAAGATTTTGACTATATGTCATTTTTTGCTTGGGACACTTCGATATTTTAGTCATGTTTTCTAACATACGACTACATAGTTTCTCAACATGCCACGTACAAACAAGACAACAAACTCATTAATTCATACTTATCTGGATTCTGATCCACATTTACTGTATACATAATT
CDS Sequence
- >AT2G29290.2
ATGGATAAAAGATGGAGTCTTCAAGGTATGAATGCTCTTGTGACCGGTGGCACTAAAGGCATCGGGGAAGCTGTTGTGGAGGAACTGTCAATTTTGGGAGCAAGAGTCCACACATGTGCTAGAGACGAGACTCAGCTTCAAGAACGTTTACGTGAATGGCAAGAAAAAGGGTTTCAGGTCACCACTTCTATCTGCGACGTTTCTTTGCGTGAGCAACGAGAGAAACTCATGGAAACCGTTTCCTCTCTCTTCCAAGGAAAACTCAACATCCTCGTGAACAATGTGGGAACGTTAATGCTCAAGCCGACCACAGAGTATACAGCAGAAGAATTCTCGTTTCTTATGGCTACAAATCTCGACTCAGCTTTCCATATTTCACAGCTTGCGCACCCTTTGTTGAAAGCCTCTGGCTCAGGGAGCATTGTGCTCATGTCCTCTATTGCCGGAGTCGTGCATGTCGGTGTTGGATCCATCTATGGAGCAACAAAAGGAGCCATGAATCAGTTGGCTAGAAACTTAGCTTGCGAATGGGCAAGCGACAACATAAGGACTAACGCTATTTGTCCATGGTTAATCACAACTCCTTTGATTAGTGATCTTCTCAGTGTTGAGGAGATGAAAAAAGAAGCAGAGGAAAGGACACCCATGGGGCGTGTGGGAGAGGCAAATGAAGTCTCACCGCTTGTGGCATTTCTTTGTCTTCCTGCAGCTTCTTATATTACTGGTCAAGTCATTTGTGTTGATGGAGGTCTCACTGTTAATGGCTTCTCCTATCAGCCACATGCTTGA - >AT2G29290.1
ATGGATAAAAGATGGAGTCTTCAAGGTATGAATGCTCTTGTGACCGGTGGCACTAAAGGCATCGGGGAAGCTGTTGTGGAGGAACTGTCAATTTTGGGAGCAAGAGTCCACACATGTGCTAGAGACGAGACTCAGCTTCAAGAACGTTTACGTGAATGGCAAGAAAAAGGGTTTCAGGTCACCACTTCTATCTGCGACGTTTCTTTGCGTGAGCAACGAGAGAAACTCATGGAAACCGTTTCCTCTCTCTTCCAAGGAAAACTCAACATCCTCGTGAACAATGTGGGAACGTTAATGCTCAAGCCGACCACAGAGTATACAGCAGAAGAATTCTCGTTTCTTATGGCTACAAATCTCGACTCAGCTTTCCATATTTCACAGCTTGCGCACCCTTTGTTGAAAGCCTCTGGCTCAGGGAGCATTGTGCTCATGTCCTCTATTGCCGGAGTCGTGCATGTCGGTGTTGGATCCATCTATGGAGCAACAAAAGGAGCCATGAATCAGTTGGCTAGAAACTTAGCTTGCGAATGGGCAAGCGACAACATAAGGACTAACGCTATTTGTCCATGGTTAATCACAACTCCTTTGATTAGTGATCTTCTCAGTGTTGAGGAGATGAAAAAAGAAGCAGAGGAAAGGACACCCATGGGGCGTGTGGGAGAGGCAAATGAAGTCTCACCGCTTGTGGCATTTCTTTGTCTTCCTGCAGCTTCTTATATTACTGGTCAAGTCATTTGTGTTGATGGAGGTCTCACTGTTAATGGCTTCTCCTATCAGCCACATGCTTGA
Protein Sequence
- >AT2G29290.2
MDKRWSLQGMNALVTGGTKGIGEAVVEELSILGARVHTCARDETQLQERLREWQEKGFQVTTSICDVSLREQREKLMETVSSLFQGKLNILVNNVGTLMLKPTTEYTAEEFSFLMATNLDSAFHISQLAHPLLKASGSGSIVLMSSIAGVVHVGVGSIYGATKGAMNQLARNLACEWASDNIRTNAICPWLITTPLISDLLSVEEMKKEAEERTPMGRVGEANEVSPLVAFLCLPAASYITGQVICVDGGLTVNGFSYQPHA - >AT2G29290.1
MDKRWSLQGMNALVTGGTKGIGEAVVEELSILGARVHTCARDETQLQERLREWQEKGFQVTTSICDVSLREQREKLMETVSSLFQGKLNILVNNVGTLMLKPTTEYTAEEFSFLMATNLDSAFHISQLAHPLLKASGSGSIVLMSSIAGVVHVGVGSIYGATKGAMNQLARNLACEWASDNIRTNAICPWLITTPLISDLLSVEEMKKEAEERTPMGRVGEANEVSPLVAFLCLPAASYITGQVICVDGGLTVNGFSYQPHA