Information report for AT2G29130
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009001 — fruit — frucht (exact, German), fruto (exact, Spanish), 果実 (exact, Japanese), coenocarp (narrow), syncarp (narrow), aggregate fruit (broad), compound fruit (broad), dehiscent fruit (broad), diaspore (broad), indehiscent fruit (broad), multiple fruit (broad), propagule (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
- GO:0080022 — acts upstream of or within — primary root development
- GO:0009414 — acts upstream of or within — response to water deprivation
- GO:0016491 — enables — oxidoreductase activity
- GO:0052716 — enables — hydroquinone:oxygen oxidoreductase activity
- GO:0005576 — located in — extracellular region
- GO:0005507 — enables — copper ion binding
- SALK_025690C — reduced root elongation under PEG-induced dehydration
Functional Keywords
- root , flower , fruit , root , vascular leaf , flower , plant sperm cell
Literature and News
- Novel and stress-regulated microRNAs and other small RNAs from Arabidopsis. DOI: 10.1105/tpc.104.022830 ; PMID: 15258262
- Identification of novel genes in Arabidopsis involved in secondary cell wall formation using expression profiling and reverse genetics. DOI: 10.1105/tpc.105.031542 ; PMID: 15980264
- Gene structure and molecular analysis of the laccase-like multicopper oxidase (LMCO) gene family in Arabidopsis thaliana. DOI: 10.1007/s00425-004-1472-6 ; PMID: 15940465
- CINNAMYL ALCOHOL DEHYDROGENASE-C and -D are the primary genes involved in lignin biosynthesis in the floral stem of Arabidopsis. DOI: 10.1105/tpc.105.030767 ; PMID: 15937231
- TRANSPARENT TESTA10 encodes a laccase-like enzyme involved in oxidative polymerization of flavonoids in Arabidopsis seed coat. DOI: 10.1105/tpc.105.035154 ; PMID: 16243908
- Biosynthesis of cellulose-enriched tension wood in Populus: global analysis of transcripts and metabolites identifies biochemical and developmental regulators in secondary wall biosynthesis. DOI: 10.1111/j.1365-313X.2005.02584.x ; PMID: 16367961
- Mutant identification and characterization of the laccase gene family in Arabidopsis. DOI: 10.1093/jxb/erl022 ; PMID: 16804053
- MicroRNA-mediated systemic down-regulation of copper protein expression in response to low copper availability in Arabidopsis. DOI: 10.1074/jbc.M801406200 ; PMID: 18408011
- GeneCAT–novel webtools that combine BLAST and co-expression analyses. DOI: 10.1093/nar/gkn292 ; PMID: 18480120
- CressExpress: a tool for large-scale mining of expression data from Arabidopsis. DOI: 10.1104/pp.107.115535 ; PMID: 18467456
- AtERF38 (At2g35700), an AP2/ERF family transcription factor gene from Arabidopsis thaliana, is expressed in specific cell types of roots, stems and seeds that undergo suberization. DOI: 10.1016/j.plaphy.2008.07.003 ; PMID: 18723362
- Mechanical load induces upregulation of transcripts for a set of genes implicated in secondary wall formation in the supporting tissue of Arabidopsis thaliana. DOI: 10.1007/s10265-009-0251-7 ; PMID: 19582540
- Functional characterization of four APETALA2-family genes (RAP2.6, RAP2.6L, DREB19 and DREB26) in Arabidopsis. DOI: 10.1007/s11103-010-9711-7 ; PMID: 21069430
- The laccase multigene family in Arabidopsis thaliana: towards addressing the mystery of their gene function(s). DOI: 10.1007/s00425-010-1298-3 ; PMID: 21063888
- Disruption of LACCASE4 and 17 results in tissue-specific alterations to lignification of Arabidopsis thaliana stems. DOI: 10.1105/tpc.110.082792 ; PMID: 21447792
- The MicroRNA397b -LACCASE2 Module Regulates Root Lignification under Water and Phosphate Deficiency. DOI: 10.1104/pp.19.00921 ; PMID: 31949029
- LACCASE2 Negatively Regulates Lignin Deposition of Arabidopsis Roots. DOI: 10.1104/pp.20.00152 ; PMID: 32127430
- Characterization and heterologous expression of laccase cDNAs from xylem tissues of yellow-poplar (Liriodendron tulipifera). DOI: 10.1023/a:1026437406859 ; PMID: 10394942
- a in poplar. DOI: 10.1046/j.1432-1327.1999.00061.x ; PMID: 9914531
- Identification of novel genes in Arabidopsis involved in secondary cell wall formation using expression profiling and reverse genetics. DOI: 10.1105/tpc.105.031542 ; PMID: 15980264
- Mutant identification and characterization of the laccase gene family in Arabidopsis. DOI: 10.1093/jxb/erl022 ; PMID: 16804053
Gene Resources
Homologs
- Brassica napus BnaTT10.A06, BnaTT10.C02
- Gossypium hirsutum GhLAC4-3
- Oryza sativa Oslacc, OsLAC, OsLAC13, OsChI1, OsLAC10, OsLAC17
- Prunus persica PRUPE_6G048400
- Solanum tuberosum Soltu.DM.05G022410
- Vitis vinifera VIT_06s0004g07420, VIT_218s0075g00580
Sequences
cDNA Sequence
- >AT2G29130.1
CCACTTGAGAGCTTCACCAGAAAACTATATAAAAAGAAAACCATATTTCATACTTTGGATATAAAACATATAACTTTCCTTCAATATTCAAACAAATATTGAACATGGTTACGTGGGTTTTGAATTATCTTCTTGTGGCATTTCTATTTGCCATTAGTTACAACATCGATGCAGCATCTGCAGGAATCACGCGGCACTACCAATTCGATATTCAACTGAAAAACATCACAAGGTTGTGCAAGACAAAAACAATCGTGACGGTCAACGGAAAATTCCCAGGACCTAGAGTTACCGCAAGAGAAGGAGATAATCTACAAATCAAAGTTGTTAATCATGTATCCAATAACATTTCTATACATTGGCATGGTATCCGGCAGCTAAGGAGTGGTTGGGCGGATGGACCGTCCTATGTGACACAATGTCCAATTCGGATGGGACAAAGTTATGTTTACAACTTCACGGTGACTGGACAAAGAGGAACCTTGTGGTGGCATGCTCATATTCAGTGGATGAGAGCTACTGTGTACGGACCATTAATCATTCTCCCTAAGCTTCATCAGCCTTACCCTTTTCCCAAACCCTACAAACAAGTCCCTATACTCTTTGGTGAGTGGTTTAATGCTGATCCTCAAGCAGTGGTGCAACAAGCTCTTCAGACGGGTGCAGGTCCAAATGCATCTGATGCTCATACTTTTAATGGGCTCCCAGGTCCATTATACAATTGCTCTACAAAAGACACATACAAACTGATGGTGAAACCTGGAAAGACGTATCTACTACGATTAATCAATGCTGCACTCAATGACGAACTCTTCTTCACCATAGCCAATCATACATTGACGGTCGTAGAAGCGGATGCTTGCTACGTTAAACCATTTCAAACCAACATCGTGCTTCTCGGCCCGGGCCAAACCACCAATGTACTACTCAAAACCAAACCTATTTATCCAAATGCAACCTTCTACATGTTGGCAAGACCGTACTTCACGGGCCAAGGAACAATTGATAATACAACCGTCGCGGGAATTCTCCAATACCAACATCATACCAAGTCTTCTAAGAATCTTTCTATCATTAAACCATCTCTCCCTCCCATCAATAGCACTAGCTACGCCGCAAATTTCACAAAGATGTTTAGAAGTTTGGCAAGTTCTACATTTCCGGCAAACGTGCCAAAAGTCGTGGACAAACAATATTTCTTTGCCATCGGTTTAGGAACCAACCCTTGTCCTAAAAACCAAACATGCCAAGGACCAACTAATACAACGAAATTTGCAGCATCTATCAACAACGTGTCTTTCATCTTACCAAACAAGACTTCTCTATTACAATCATACTTCGTTGGCAAATCCAAGAATGTTTTCATGACCGATTTCCCAACTGCCCCTATTATTCCATTTAATTACACGGGTACGCCACCAAACAACACAATGGTCTCAAGAGGGACCAAAGTTGTGGTCTTGAAGTACAAGACAACTGTTGAATTGGTGTTACAGGGCACTAGCATCTTGGGTATTGAGGCCCACCCTATACATCTTCATGGCTTCAACTTTTATGTGGTGGGTCAAGGCTTTGGCAATTTTAACCCGGCCCGTGACCCAAAACATTATAACCTAGTCGATCCGGTCGAACGAAACACCATCAATATCCCTTCCGGTGGATGGGTCGCCATCCGCTTCCTTGCCGATAATCCCGGTGTGTGGCTGATGCATTGCCACATTGAGATTCATTTGAGTTGGGGTCTGACCATGGCTTGGGTTGTTTTGGACGGTGACCTTCCAAATCAGAAGCTCCTTCCTCCACCCTCAGATTTCCCTAAATGTTGACTATGACCGATCCAACGCCTCTGCAAATGCCACATCACCTTTTTCCCTTTCTTGGAATGATATTTCTGAAGTGCAATATATGTCTCTTTTTCGTTTTTTTTTCTTCATTTTATTTCTTTCCTCTTTAATACTTTTGTGTTTTGAGATTTCTGAGTTTTTTTATCCCTTTGCTTGATGATTTGTTGTATAAAGAGTGAACTGAAAAACGATGGTCGCGTTAGTAATTTCTGTGTACGATATGTTGACGCAAAATAAATAATCGTAAAGTTTTGTAATAAACGAAAAAGGCATTAGCACAAATCTGCAATGCTCGTGATTTTTTTTCTTAAACATAACGTTTTTGTCTATGATAATGACAAAAG
CDS Sequence
- >AT2G29130.1
ATGGTTACGTGGGTTTTGAATTATCTTCTTGTGGCATTTCTATTTGCCATTAGTTACAACATCGATGCAGCATCTGCAGGAATCACGCGGCACTACCAATTCGATATTCAACTGAAAAACATCACAAGGTTGTGCAAGACAAAAACAATCGTGACGGTCAACGGAAAATTCCCAGGACCTAGAGTTACCGCAAGAGAAGGAGATAATCTACAAATCAAAGTTGTTAATCATGTATCCAATAACATTTCTATACATTGGCATGGTATCCGGCAGCTAAGGAGTGGTTGGGCGGATGGACCGTCCTATGTGACACAATGTCCAATTCGGATGGGACAAAGTTATGTTTACAACTTCACGGTGACTGGACAAAGAGGAACCTTGTGGTGGCATGCTCATATTCAGTGGATGAGAGCTACTGTGTACGGACCATTAATCATTCTCCCTAAGCTTCATCAGCCTTACCCTTTTCCCAAACCCTACAAACAAGTCCCTATACTCTTTGGTGAGTGGTTTAATGCTGATCCTCAAGCAGTGGTGCAACAAGCTCTTCAGACGGGTGCAGGTCCAAATGCATCTGATGCTCATACTTTTAATGGGCTCCCAGGTCCATTATACAATTGCTCTACAAAAGACACATACAAACTGATGGTGAAACCTGGAAAGACGTATCTACTACGATTAATCAATGCTGCACTCAATGACGAACTCTTCTTCACCATAGCCAATCATACATTGACGGTCGTAGAAGCGGATGCTTGCTACGTTAAACCATTTCAAACCAACATCGTGCTTCTCGGCCCGGGCCAAACCACCAATGTACTACTCAAAACCAAACCTATTTATCCAAATGCAACCTTCTACATGTTGGCAAGACCGTACTTCACGGGCCAAGGAACAATTGATAATACAACCGTCGCGGGAATTCTCCAATACCAACATCATACCAAGTCTTCTAAGAATCTTTCTATCATTAAACCATCTCTCCCTCCCATCAATAGCACTAGCTACGCCGCAAATTTCACAAAGATGTTTAGAAGTTTGGCAAGTTCTACATTTCCGGCAAACGTGCCAAAAGTCGTGGACAAACAATATTTCTTTGCCATCGGTTTAGGAACCAACCCTTGTCCTAAAAACCAAACATGCCAAGGACCAACTAATACAACGAAATTTGCAGCATCTATCAACAACGTGTCTTTCATCTTACCAAACAAGACTTCTCTATTACAATCATACTTCGTTGGCAAATCCAAGAATGTTTTCATGACCGATTTCCCAACTGCCCCTATTATTCCATTTAATTACACGGGTACGCCACCAAACAACACAATGGTCTCAAGAGGGACCAAAGTTGTGGTCTTGAAGTACAAGACAACTGTTGAATTGGTGTTACAGGGCACTAGCATCTTGGGTATTGAGGCCCACCCTATACATCTTCATGGCTTCAACTTTTATGTGGTGGGTCAAGGCTTTGGCAATTTTAACCCGGCCCGTGACCCAAAACATTATAACCTAGTCGATCCGGTCGAACGAAACACCATCAATATCCCTTCCGGTGGATGGGTCGCCATCCGCTTCCTTGCCGATAATCCCGGTGTGTGGCTGATGCATTGCCACATTGAGATTCATTTGAGTTGGGGTCTGACCATGGCTTGGGTTGTTTTGGACGGTGACCTTCCAAATCAGAAGCTCCTTCCTCCACCCTCAGATTTCCCTAAATGTTGA
Protein Sequence
- >AT2G29130.1
MVTWVLNYLLVAFLFAISYNIDAASAGITRHYQFDIQLKNITRLCKTKTIVTVNGKFPGPRVTAREGDNLQIKVVNHVSNNISIHWHGIRQLRSGWADGPSYVTQCPIRMGQSYVYNFTVTGQRGTLWWHAHIQWMRATVYGPLIILPKLHQPYPFPKPYKQVPILFGEWFNADPQAVVQQALQTGAGPNASDAHTFNGLPGPLYNCSTKDTYKLMVKPGKTYLLRLINAALNDELFFTIANHTLTVVEADACYVKPFQTNIVLLGPGQTTNVLLKTKPIYPNATFYMLARPYFTGQGTIDNTTVAGILQYQHHTKSSKNLSIIKPSLPPINSTSYAANFTKMFRSLASSTFPANVPKVVDKQYFFAIGLGTNPCPKNQTCQGPTNTTKFAASINNVSFILPNKTSLLQSYFVGKSKNVFMTDFPTAPIIPFNYTGTPPNNTMVSRGTKVVVLKYKTTVELVLQGTSILGIEAHPIHLHGFNFYVVGQGFGNFNPARDPKHYNLVDPVERNTINIPSGGWVAIRFLADNPGVWLMHCHIEIHLSWGLTMAWVVLDGDLPNQKLLPPPSDFPKC