Gene Details:
- Gene ID: AT2G28900
- Gene Symbol: ATOEP16-1, ATOEP16-L, OEP16, OEP16-1
- Gene Name: outer plastid envelope protein 16-1, OUTER PLASTID ENVELOPE PROTEIN 16-L, outer envelope protein 16, outer plastid envelope protein 16-1
- Description: outer plastid envelope protein 16-1;(source:Araport11)
- TAIR Accession:
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- PO:0009088 — seed coat — cubierta de la semilla (Spanish, exact), portion of seed coat tissue (exact), 種子種皮 (Japanese, exact)
- PO:0009089 — endosperm — albumen (exact), endosperma (Spanish, exact), 内胚乳、胚乳 (Japanese, exact)
Germplasm Phenotype:
- SALK_024018 — Rapidly bleached and finally died if grown in darkness and exposed to white light. No phenotype of kept under continuous white light right from the begining of germination.
Function-related keywords:
- shoot axis apex , leaf lamina base , root , shoot system , plant embryo , vascular leaf , stamen , sepal , flower , inflorescence flower pedicel , cotyledon , petiole , hypocotyl , leaf apex , collective leaf structure , pollen , vascular leaf , plant embryo , seed coat , endosperm
Literature:
- New molecular phenotypes in the dst mutants of Arabidopsis revealed by DNA microarray analysis. DOI: 10.1105/tpc.010295 ; PMID: 11752382
- Prediction of the plant beta-barrel proteome: a case study of the chloroplast outer envelope. DOI: 10.1110/ps.0237503 ; PMID: 12649433
- The sfr6 mutant of Arabidopsis is defective in transcriptional activation via CBF/DREB1 and DREB2 and shows sensitivity to osmotic stress. DOI: 10.1046/j.1365-313x.2003.01734.x ; PMID: 12753580
- Proteomics of the chloroplast envelope membranes from Arabidopsis thaliana. DOI: 10.1074/mcp.M300030-MCP200 ; PMID: 12766230
- The Arabidopsis ppi1 mutant is specifically defective in the expression, chloroplast import, and accumulation of photosynthetic proteins. DOI: 10.1105/tpc.012955 ; PMID: 12897258
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- Microarray expression analyses of Arabidopsis guard cells and isolation of a recessive abscisic acid hypersensitive protein phosphatase 2C mutant. DOI: 10.1105/tpc.019000 ; PMID: 14973164
- The outer plastid envelope protein Oep16: role as precursor translocase in import of protochlorophyllide oxidoreductase A. DOI: 10.1073/pnas.0301962101 ; PMID: 14769929
- Identification of cold-inducible downstream genes of the Arabidopsis DREB1A/CBF3 transcriptional factor using two microarray systems. DOI: 10.1111/j.1365-313X.2004.02100.x ; PMID: 15165189
- Global transcription profiling reveals multiple sugar signal transduction mechanisms in Arabidopsis. DOI: 10.1105/tpc.104.022616 ; PMID: 15273295
- Lipid utilization, gluconeogenesis, and seedling growth in Arabidopsis mutants lacking the glyoxylate cycle enzyme malate synthase. DOI: 10.1074/jbc.M407380200 ; PMID: 15272001
- Freezing-sensitive tomato has a functional CBF cold response pathway, but a CBF regulon that differs from that of freezing-tolerant Arabidopsis. DOI: 10.1111/j.1365-313X.2004.02176.x ; PMID: 15341633
- The vegetative vacuole proteome of Arabidopsis thaliana reveals predicted and unexpected proteins. DOI: 10.1105/tpc.104.027078 ; PMID: 15539469
- A role of Toc33 in the protochlorophyllide-dependent plastid import pathway of NADPH:protochlorophyllide oxidoreductase (POR) A. DOI: 10.1111/j.1365-313X.2005.02353.x ; PMID: 15773849
- Expression profiling reveals COI1 to be a key regulator of genes involved in and methyl jasmonate-induced secondary metabolism, defence, and hormone interactions. DOI: 10.1007/s11103-005-7306-5 ; PMID: 16021335
- Identification and immunogold localization of a novel bromegrass (Bromus inermis Leyss) peroxisome channel protein induced by ABA, cold and drought stresses, and late embryogenesis. DOI: 10.1016/j.gene.2005.06.046 ; PMID: 16226403
- Characterization of transformed Arabidopsis with altered alternative oxidase levels and analysis of effects on reactive oxygen species in tissue. DOI: 10.1104/pp.105.070763 ; PMID: 16299171
- Monitoring expression profiles of Arabidopsis genes during cold acclimation and deacclimation using DNA microarrays. DOI: 10.1007/s10142-005-0014-z ; PMID: 16463051
- Gene duplication, exon gain and neofunctionalization of OEP16-related genes in land plants. DOI: 10.1111/j.1365-313X.2006.02741.x ; PMID: 16709189
- Genetic variation suggests interaction between cold acclimation and metabolic regulation of leaf senescence. DOI: 10.1104/pp.106.091355 ; PMID: 17098848
- A plant porphyria related to defects in plastid import of protochlorophyllide oxidoreductase A. DOI: 10.1073/pnas.0610934104 ; PMID: 17261815
- PIC1, an ancient permease in Arabidopsis chloroplasts, mediates iron transport. DOI: 10.1105/tpc.106.047407 ; PMID: 17337631
- Genome-wide expression profiling Arabidopsis at the stage of Golovinomyces cichoracearum haustorium formation. DOI: 10.1104/pp.107.111286 ; PMID: 18218973
- The plant Apolipoprotein D ortholog protects Arabidopsis against oxidative stress. DOI: 10.1186/1471-2229-8-86 ; PMID: 18671872
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- The DDF1 transcriptional activator upregulates expression of a gibberellin-deactivating gene, GA2ox7, under high-salinity stress in Arabidopsis. DOI: 10.1111/j.1365-313X.2008.03627.x ; PMID: 18643985
- Chloroplast biogenesis: the use of mutants to study the etioplast-chloroplast transition. DOI: 10.1073/pnas.0610062104 ; PMID: 17202255
- A search for factors influencing etioplast-chloroplast transition. DOI: 10.1073/pnas.0902145106 ; PMID: 19567834
- Implication of the oep16-1 mutation in a flu-independent, singlet oxygen-regulated cell death pathway in Arabidopsis thaliana. DOI: 10.1093/pcp/pcq176 ; PMID: 21098557
- The outer chloroplast envelope protein OEP16-1 for plastid import of NADPH:protochlorophyllide oxidoreductase A in Arabidopsis thaliana. DOI: 10.1093/pcp/pcq177 ; PMID: 21098556
- Differentiation of Arabidopsis guard cells: analysis of the networks incorporating the basic helix-loop-helix transcription factor, FAMA. DOI: 10.1104/pp.110.167718 ; PMID: 21245191
- The plastid outer envelope protein OEP16 affects metabolic fluxes during ABA-controlled seed development and germination. DOI: 10.1093/jxb/err375 ; PMID: 22155670
- Discovering the RNA-Binding Proteome of Plant Leaves with an Improved RNA Interactome Capture Method. DOI: 10.3390/biom10040661 ; PMID: 32344669
- Proteomics of the chloroplast envelope membranes from Arabidopsis thaliana. DOI: 10.1074/mcp.M300030-MCP200 ; PMID: 12766230
- Proteomic study of the Arabidopsis thaliana chloroplastic envelope membrane utilizing alternatives to traditional two-dimensional electrophoresis. DOI: 10.1021/pr034025j ; PMID: 12938931
- The Arabidopsis thaliana chloroplast proteome reveals pathway abundance and novel protein functions. DOI: 10.1016/j.cub.2004.02.039 ; PMID: 15028209
- The vegetative vacuole proteome of Arabidopsis thaliana reveals predicted and unexpected proteins. DOI: 10.1105/tpc.104.027078 ; PMID: 15539469
- Expression profiling reveals COI1 to be a key regulator of genes involved in and methyl jasmonate-induced secondary metabolism, defence, and hormone interactions. DOI: 10.1007/s11103-005-7306-5 ; PMID: 16021335
- Identification of sugar-modulated genes and evidence for in vivo sugar sensing in Arabidopsis. DOI: 10.1007/s10265-005-0251-1 ; PMID: 16463203
- A plant porphyria related to defects in plastid import of protochlorophyllide oxidoreductase A. DOI: 10.1073/pnas.0610934104 ; PMID: 17261815
- Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. DOI: 10.1371/journal.pone.0001994 ; PMID: 18431481
Sequences:
cDNA Sequence
- >AT2G28900.1
ATTTAACTGGCTCATTGCTCAATACATATCTCGTCGTGGGTCCTTGTTAATCTCTTCTCCACCGTTGAACCATAGTTTAAAATATCCACCGTTAAAAGCCCCTTTATATCCCAAGAAATAGGTGAACTTGTTACAGAACAAGCAAAGATCAAAGAGAAAAATATCCCAAAACCAAAAACAGAGGAAGAAAGAAGAAGAAAAGATGCCTTCAAGCACATTCTCCGGGACTGTTAGCACGCCGAAGCTGTCGGTGGCAGTGGACATGGGAAACCCTTTTCTCAATCTCACCGTTGATGCCTTCCTCAAGATCGGAGCTGTTGGAGTCACTAAATCTCTTGCAGAAGACACTTACAAGGCCATCGACAAAGGGAGTCTCTCCAAGAGCACTTTGGAGCATGCGCTTAAGAAGTTGTGTAAAGAAGGTGTTTACTGGGGAGCTGCTGGTGGAGTGTACATTGGAACAGAATACGGAATCGAACGTATCCGTGGCAGCAGAGATTGGAAAAACGCAATGTTAGCAGGCGCGGCGACAGGAGCAGTGCTCTCAGCGGTTGGTAAGAAAGGCAAAGACACTATTGTGATCGATGCCATTCTTGGTGGCGCGCTTGCAACCGCTTCTCAGTTCGTTAACAATCATTATTTCTACTGATTCTCCATCTTCCTTTAGGGACCAATTTGGTTCATATGGTGTGGATTCCTTTGTTTACTCTTTAAATAATAATAAAAAACAATGTAGTGTTTTTGAAATGAATACATTCGAGTATTGTTGACGTTAAATATGCAATTTAGCTATTTTCAATATGAGAAATGCCTCGAAATATGAAAATTTGTATAGAGAGTAGTAATGATTTTGTGGTTTCTATAAAACTCTCTAATGTGTATACTCAACCATAACGAGTTGTCCGATGTGTATTTAGCAACTATCACTATAGTTAAAGAGAGAGAGTAATTAAGTCTTTGCCCA
CDS Sequence
- >AT2G28900.1
ATGCCTTCAAGCACATTCTCCGGGACTGTTAGCACGCCGAAGCTGTCGGTGGCAGTGGACATGGGAAACCCTTTTCTCAATCTCACCGTTGATGCCTTCCTCAAGATCGGAGCTGTTGGAGTCACTAAATCTCTTGCAGAAGACACTTACAAGGCCATCGACAAAGGGAGTCTCTCCAAGAGCACTTTGGAGCATGCGCTTAAGAAGTTGTGTAAAGAAGGTGTTTACTGGGGAGCTGCTGGTGGAGTGTACATTGGAACAGAATACGGAATCGAACGTATCCGTGGCAGCAGAGATTGGAAAAACGCAATGTTAGCAGGCGCGGCGACAGGAGCAGTGCTCTCAGCGGTTGGTAAGAAAGGCAAAGACACTATTGTGATCGATGCCATTCTTGGTGGCGCGCTTGCAACCGCTTCTCAGTTCGTTAACAATCATTATTTCTACTGA
Protein Sequence
- >AT2G28900.1
MPSSTFSGTVSTPKLSVAVDMGNPFLNLTVDAFLKIGAVGVTKSLAEDTYKAIDKGSLSKSTLEHALKKLCKEGVYWGAAGGVYIGTEYGIERIRGSRDWKNAMLAGAATGAVLSAVGKKGKDTIVIDAILGGALATASQFVNNHYFY