Gene Details:

• Gene ID: AT2G28830
• Gene Symbol: AtPUB12, PUB12
• Gene Name: PLANT U-BOX 12
• Description: armadillo/beta-catenin repeat protein;(source:Araport11)
• TAIR Accession: locus:2053190
• Genome: Araport11_genome_release
• Species: Arabidopsis thaliana

Transcripts:

• AT2G28830.1

Plant Ontology Annotations:

• PO:0000037  — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
• PO:0008019  — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
• PO:0009005  — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
• PO:0009009  — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
• PO:0009025  — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
• PO:0009029  — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
• PO:0009031  — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
• PO:0009046  — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
• PO:0020030  — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
• PO:0020038  — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
• PO:0020100  — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
• PO:0020137  — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
• PO:0025022  — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
• PO:0025281  — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
• PO:0025195  — pollen tube cell — célula del tubo polínico (Spanish, exact), 花粉管細胞 (Japanese, exact)

Gene Ontology:

• GO:0042742  — acts upstream of or within — defense response to bacterium
• GO:0005737  — located in — cytoplasm
• GO:0004842  — enables — ubiquitin-protein transferase activity
• GO:0005515  — enables — protein binding
• GO:0050777  — acts upstream of or within — negative regulation of immune response
• GO:0003824  — enables — catalytic activity

Function-related keywords:

• shoot axis apex ,  leaf lamina base ,  root ,  plant embryo ,  vascular leaf ,  stamen ,  sepal ,  flower ,  cotyledon ,  petiole ,  hypocotyl ,  leaf apex ,  collective leaf structure ,  pollen ,  pollen tube cell

Literature:

• Cell cycle-regulated gene expression in Arabidopsis.   DOI:  10.1074/jbc.M207570200 ;  PMID:  12169696
• Armadillo repeat proteins: beyond the animal kingdom.   DOI:  10.1016/s0962-8924(03)00167-3 ;  PMID:  12946625
• The transcriptional innate immune response to flg22. Interplay and overlap with Avr gene-dependent defense responses and bacterial pathogenesis.   DOI:  10.1104/pp.103.036749 ;  PMID:  15181213
• Structure and biochemical function of a prototypical Arabidopsis U-box domain.   DOI:  10.1074/jbc.M405057200 ;  PMID:  15231834
• Identification of 118 Arabidopsis transcription factor and 30 ubiquitin-ligase genes responding to chitin, a plant-defense elicitor.   DOI:  10.1094/MPMI-20-8-0900 ;  PMID:  17722694
• Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis.   DOI:  10.1104/pp.108.126375 ;  PMID:  18775970
• Direct ubiquitination of pattern recognition receptor FLS2 attenuates plant innate immunity.   DOI:  10.1126/science.1204903 ;  PMID:  21680842
• The dominant negative ARM domain uncovers multiple functions of PUB13 in Arabidopsis immunity, flowering, and senescence.   DOI:  10.1093/jxb/erv148 ;  PMID:  25873653
• PLANT U-BOX PROTEIN10 Regulates MYC2 Stability in Arabidopsis.   DOI:  10.1105/tpc.15.00385 ;  PMID:  26163577
• Degradation of the ABA co-receptor ABI1 by PUB12/13 U-box E3 ligases.   DOI:  10.1038/ncomms9630 ;  PMID:  26482222
• New players in ABA signaling: identification of PUB12/13 involved in degradation of ABA co-receptor ABI1.   DOI:  10.1007/s11427-015-4947-8 ;  PMID:  26511514
• Arabidopsis ubiquitin ligase PUB12 interacts with and negatively regulates Chitin Elicitor Receptor Kinase 1 (CERK1).   DOI:  10.1371/journal.pone.0188886 ;  PMID:  29182677
• Regulation of Arabidopsis brassinosteroid receptor BRI1 endocytosis and degradation by plant U-box PUB12/PUB13-mediated ubiquitination.   DOI:  10.1073/pnas.1712251115 ;  PMID:  29432171
• News from the PUB: plant U-box type E3 ubiquitin ligases.   DOI:  10.1093/jxb/erx411 ;  PMID:  29237060
• The receptor-like cytoplasmic kinase CDG1 negatively regulates Arabidopsis pattern-triggered immunity and is involved in AvrRpm1-induced RIN4 phosphorylation.   DOI:  10.1093/plcell/koab033 ;  PMID:  33619522
• S-acylation stabilizes ligand-induced receptor kinase complex formation during plant pattern-triggered immune signaling.   DOI:  10.1016/j.cub.2023.02.065 ;  PMID:  36924767
• Identification of 118 Arabidopsis transcription factor and 30 ubiquitin-ligase genes responding to chitin, a plant-defense elicitor.   DOI:  10.1094/MPMI-20-8-0900 ;  PMID:  17722694

Sequences: