Gene Details:
- Gene ID: AT2G28740
- Gene Symbol: HIS4
- Gene Name: histone H4
- Description: histone H4;(source:Araport11)
- TAIR Accession: locus:2053195
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
Gene Ontology:
- GO:0005730 — located in — nucleolus
- GO:0009414 — acts upstream of or within — response to water deprivation
- GO:0005634 — located in — nucleus
- GO:0000786 — located in — nucleosome
Function-related keywords:
- shoot axis apex , leaf lamina base , root , shoot system , plant embryo , vascular leaf , stamen , sepal , flower , inflorescence flower pedicel , cotyledon , petiole , hypocotyl , leaf apex , collective leaf structure , pollen , plant sperm cell , pollen
Literature:
- A drought-stress-inducible histone gene in Arabidopsis thaliana is a member of a distinct class of plant linker histone variants. DOI: 10.1023/a:1005886011722 ; PMID: 9247544
- Cell cycle-regulated gene expression in Arabidopsis. DOI: 10.1074/jbc.M207570200 ; PMID: 12169696
- A CDC45 homolog in Arabidopsis is essential for meiosis, as shown by RNA interference-induced gene silencing. DOI: 10.1105/tpc.016865 ; PMID: 14660803
- DNA array analyses of Arabidopsis thaliana lacking a vacuolar Na+/H+ antiporter: impact of AtNHX1 on gene expression. DOI: 10.1111/j.1365-313X.2004.02253.x ; PMID: 15546358
- A transcriptome-based characterization of habituation in plant tissue culture. DOI: 10.1104/pp.105.076059 ; PMID: 16489130
- The D-type cyclin CYCD3;1 is limiting for the G1-to-S-phase transition in Arabidopsis. DOI: 10.1105/tpc.105.039636 ; PMID: 16517759
- Arabidopsis VIRE2 INTERACTING PROTEIN2 is required for Agrobacterium T-DNA integration in plants. DOI: 10.1105/tpc.106.042903 ; PMID: 17496122
- The relationship of drought-related gene expression in Arabidopsis thaliana to hormonal and environmental factors. DOI: 10.1093/jxb/ern155 ; PMID: 18552355
- Arabidopsis PEROXIN11c-e, FISSION1b, and DYNAMIN-RELATED PROTEIN3A cooperate in cell cycle-associated replication of peroxisomes. DOI: 10.1105/tpc.107.057679 ; PMID: 18539750
- Overexpression of several Arabidopsis histone genes increases agrobacterium-mediated transformation and transgene expression in plants. DOI: 10.1105/tpc.109.070607 ; PMID: 19820187
- UV-B-induced DNA damage mediates expression changes of cell cycle regulatory genes in Arabidopsis root tips. DOI: 10.1007/s00425-010-1340-5 ; PMID: 21221633
- The enzymatic activity of Arabidopsis protein arginine methyltransferase 10 is essential for flowering time regulation. DOI: 10.1007/s13238-012-2935-3 ; PMID: 22729397
- Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. DOI: 10.1186/1471-2229-13-229 ; PMID: 24377444
- Auxin decreases chromatin accessibility through the TIR1/AFBs auxin signaling pathway in proliferative cells. DOI: 10.1038/s41598-018-25963-y ; PMID: 29773913
- Plant Histone HTB (H2B) Variants in Regulating Chromatin Structure and Function. DOI: 10.3390/plants9111435 ; PMID: 33113795
- Priming with a Seaweed Extract Strongly Improves Drought Tolerance in Arabidopsis. DOI: 10.3390/ijms22031469 ; PMID: 33540571
- A MRG-operated chromatin switch at SOC1 attenuates abiotic stress responses during the floral transition. DOI: 10.1093/plphys/kiab275 ; PMID: 34618146
- Systematic histone H4 replacement in Arabidopsis thaliana reveals a role for H4R17 in regulating flowering time. DOI: 10.1093/plcell/koac211 ; PMID: 35879829
- N-acetylglutamic acid alleviates oxidative stress based on histone acetylation in plants. DOI: 10.3389/fpls.2023.1165646 ; PMID: 37223787
- Proteomic analysis of the Arabidopsis nucleolus suggests novel nucleolar functions. DOI: 10.1091/mbc.e04-09-0791 ; PMID: 15496452
- A membrane-bound NAC transcription factor regulates cell division in Arabidopsis. DOI: 10.1105/tpc.106.043018 ; PMID: 17098812
- Mutations in the Type II protein arginine methyltransferase AtPRMT5 result in pleiotropic developmental defects in Arabidopsis. DOI: 10.1104/pp.107.099531 ; PMID: 17573539
- Up-regulation of stress-inducible genes in tobacco and Arabidopsis cells in response to abiotic stresses and ABA treatment correlates with dynamic changes in histone H3 and H4 modifications. DOI: 10.1007/s00425-007-0612-1 ; PMID: 17721787
- In vitro specificities of Arabidopsis co-activator histone acetyltransferases: implications for histone hyperacetylation in gene activation. DOI: 10.1111/j.1365-313X.2007.03264.x ; PMID: 17877703
- Involvement of Arabidopsis HOS15 in histone deacetylation and cold tolerance. DOI: 10.1073/pnas.0801029105 ; PMID: 18356294
- Arabidopsis PEROXIN11c-e, FISSION1b, and DYNAMIN-RELATED PROTEIN3A cooperate in cell cycle-associated replication of peroxisomes. DOI: 10.1105/tpc.107.057679 ; PMID: 18539750
- Plant SMU-1 and SMU-2 homologues regulate pre-mRNA splicing and multiple aspects of development. DOI: 10.1104/pp.109.141705 ; PMID: 19734266
- Analysis of the Arabidopsis cytosolic proteome highlights subcellular partitioning of central plant metabolism. DOI: 10.1021/pr1009433 ; PMID: 21166475
Sequences:
cDNA Sequence
- >AT2G28740.1
TCACGATTCATTTTCTAACCCAAACAATCTTCTTTATAAATAAAAAATAAATTCTTCTCTACTCATCAGAAAACTCAAATCTTAAAACTTTCTGGAAAAACAAAAATGTCAGGAAGAGGAAAAGGAGGAAAAGGGTTAGGCAAAGGAGGAGCAAAGAGACACAGAAAGGTTCTAAGAGACAACATTCAAGGAATCACAAAGCCAGCGATTCGTCGTCTTGCTCGTAGAGGAGGTGTGAAGAGAATCAGTGGATTGATCTATGAAGAAACGAGAGGTGTGTTGAAGATTTTTCTGGAGAATGTGATTAGAGATGCTGTTACTTACACTGAGCATGCGAGGAGGAAGACGGTGACTGCTATGGATGTTGTTTATGCCTTGAAGAGACAAGGAAGAACTCTATATGGATTTGGTGGTTGATCAATTTGAGATCTGGGTTTTCTGGTGAATGATGATGATTTAAGTCTTGCGATCAAGAAATTCCAGAAATTGGGTTGAATTTTAGGGTTTCGTTTTGTGTTGTAATTAGGGCAGCATTGTAATGGATTAATGATAAGTACCATTTGCTCTAATTACTCTTTAATCTCTGAAATTCATGGTAAAGGATTATCAATCGAAAACTAATCAAAGGAATTGATTGAACTATGTTTTTGAAGATTGAAAAACAAATAAGGACTAAATGTGAGCAATTTAAAGTTTAGAGGTATAAGAATCGAAT
CDS Sequence
- >AT2G28740.1
ATGTCAGGAAGAGGAAAAGGAGGAAAAGGGTTAGGCAAAGGAGGAGCAAAGAGACACAGAAAGGTTCTAAGAGACAACATTCAAGGAATCACAAAGCCAGCGATTCGTCGTCTTGCTCGTAGAGGAGGTGTGAAGAGAATCAGTGGATTGATCTATGAAGAAACGAGAGGTGTGTTGAAGATTTTTCTGGAGAATGTGATTAGAGATGCTGTTACTTACACTGAGCATGCGAGGAGGAAGACGGTGACTGCTATGGATGTTGTTTATGCCTTGAAGAGACAAGGAAGAACTCTATATGGATTTGGTGGTTGA
Protein Sequence
- >AT2G28740.1
MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG