Information report for AT2G28700
Gene Details
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Functional Descriptions
- GO:0006355 — acts upstream of or within — regulation of DNA-templated transcription
- GO:0000981 — enables — DNA-binding transcription factor activity, RNA polymerase II-specific
- GO:0045944 — involved in — positive regulation of transcription by RNA polymerase II
- GO:0006357 — involved in — regulation of transcription by RNA polymerase II
- GO:0046983 — enables — protein dimerization activity
- GO:0005634 — located in — nucleus
- GO:0003700 — enables — DNA-binding transcription factor activity
- GO:0000978 — enables — RNA polymerase II cis-regulatory region sequence-specific DNA binding
Functional Keywords
Literature and News
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- Genomewide structural annotation and evolutionary analysis of the type I MADS-box genes in plants. DOI: 10.1007/s00239-002-2426-x ; PMID: 12698294
- Molecular and phylogenetic analyses of the complete MADS-box transcription factor family in Arabidopsis: new openings to the MADS world. DOI: 10.1105/tpc.011544 ; PMID: 12837945
- Evolution and divergence of the MADS-box gene family based on genome-wide expression analyses. DOI: 10.1093/molbev/msg216 ; PMID: 12949148
- Comprehensive interaction map of the Arabidopsis MADS Box transcription factors. DOI: 10.1105/tpc.105.031831 ; PMID: 15805477
- The genetic basis of zinc tolerance in the metallophyte Arabidopsis halleri ssp. halleri (Brassicaceae): an analysis of quantitative trait loci. DOI: 10.1534/genetics.106.064485 ; PMID: 17409091
- An atlas of type I MADS box gene expression during female gametophyte and seed development in Arabidopsis. DOI: 10.1104/pp.110.160770 ; PMID: 20631316
- FERTILIZATION-INDEPENDENT SEED-Polycomb Repressive Complex 2 Plays a Dual Role in Regulating Type I MADS-Box Genes in Early Endosperm Development. DOI: 10.1104/pp.17.00534 ; PMID: 29523711
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
Gene Resources
- UniProt: F4IIT6
- EMBL: CP002685
- AlphaFoldDB: F4IIT6
- EnsemblPlants: AT2G28700.1
- Gramene: AT2G28700.1
- KEGG: ath:AT2G28700
- Orthologous matrix: LYHHKNV
Homologs
- Brassica napus GSBRNA2T00005999001, GSBRNA2T00066453001
- Brassica oleracea XP_013624445.1, XP_013624486.1, XP_013624526.1, XP_013624565.1, XP_013630382.1, XP_013584728.1
- Brassica rapa XP_009124958.1, XP_009147196.1, XP_009147197.1
- Raphanus raphanistrum RrC3302_p3
Sequences
cDNA Sequence
- >AT2G28700.1
TTTGCTTTACAGTAAAAAAAAATATAATACACGTAAACCATAGCAAAAAAATCATCTAGTGTAGTCATGGCAAGAAAAAAGTTAAATCTAACTTACATTTTCAATGATAGAATGAGGAAAAGATCGTTCAAGCAGAGGAGAGAAGGATTTCTGAAGAAACTCAATGATCTCAAGGTTTTATGCGATGTTAATGCATGTGCGGTCGTCTACAATCCATTCAACTCAAATCCAGATGTGTGGCCATCAAAATCGGAGGTGAATAATATCATCAAGAAATTTGAGATGTTACCGGAGACCCAAAAGAAAGTTAAATCGGTGAACCACGAAGAATTTCTCAATCTATACATCTCAAAAGTCGAAAAGCAAAGTAAGAAATTAATTGTAGAAAATAAGGAGACTTGCTTAAAGGAGGTCATGTTCAAGTGTCTTGGTGGGAACATGGGAGATTTTGTTATGAATGATAATGATCGTCTTGACTTATGTAAGTTTATTGATCACTATCTTAGAAATCTTTATCATCATAAAAATGTAACCCTCAACAATCCAAATTTTGAAATCGGAGAATCTTCTTCATTAATGGATATGGCACCAACCGCTACAACTGGAAACATGGCAACAACTGTAGTAGATGAAGGCATGACACCACTTCTTATTGCTGAAGGGAGTTCCTCCTCATTTTTGAATTCTCCACTCTTCAACTCTCCTCAGCTAACCAACGAGTTGCAGCTTATAGTCTCTCAAAACCATAGATTAGAGAATTCTCTGGCAAGTAATCTCTTTTTCAGTGAAGGGCAAGACATTTGCATTCCAGATATGAATCAGTCCATAATCCCATCAAACCAAGGAGCAGAACATGTGGATTTTCTTGAAAGTAATTTTCTACCTAATAACAATCAAGAAGTTTATATCCCAGTTATGGATCAGGATGAAGTTTACAATCCAAATCAAAATCATTATGAGAACCAACAAGGATTCATTGACGAGATGATGAAATATGCTGAGAAAACAAGTTTTCCTTGGATGGTAGAGAACCACTGTTATAATCACAACCAGTAATAACGCATATCCATCAACGCCGATGTCAATGCCAAAATGTTATCTTTGTTTTCTTTGTCGTTTTTAATAAATTTTCTTAATGACAATCGTTGAATCTGATATGTCTTATCTTTTAGTTCATCAAGTTTTGGTTTTCTAGTTAATATGTTTTCTATAATTATTATTTTGAAGAAATTGATTAATATATTTTTATTAATAAATTTAAAGCCAGATTCTGT
CDS Sequence
- >AT2G28700.1
ATGGCAAGAAAAAAGTTAAATCTAACTTACATTTTCAATGATAGAATGAGGAAAAGATCGTTCAAGCAGAGGAGAGAAGGATTTCTGAAGAAACTCAATGATCTCAAGGTTTTATGCGATGTTAATGCATGTGCGGTCGTCTACAATCCATTCAACTCAAATCCAGATGTGTGGCCATCAAAATCGGAGGTGAATAATATCATCAAGAAATTTGAGATGTTACCGGAGACCCAAAAGAAAGTTAAATCGGTGAACCACGAAGAATTTCTCAATCTATACATCTCAAAAGTCGAAAAGCAAAGTAAGAAATTAATTGTAGAAAATAAGGAGACTTGCTTAAAGGAGGTCATGTTCAAGTGTCTTGGTGGGAACATGGGAGATTTTGTTATGAATGATAATGATCGTCTTGACTTATGTAAGTTTATTGATCACTATCTTAGAAATCTTTATCATCATAAAAATGTAACCCTCAACAATCCAAATTTTGAAATCGGAGAATCTTCTTCATTAATGGATATGGCACCAACCGCTACAACTGGAAACATGGCAACAACTGTAGTAGATGAAGGCATGACACCACTTCTTATTGCTGAAGGGAGTTCCTCCTCATTTTTGAATTCTCCACTCTTCAACTCTCCTCAGCTAACCAACGAGTTGCAGCTTATAGTCTCTCAAAACCATAGATTAGAGAATTCTCTGGCAAGTAATCTCTTTTTCAGTGAAGGGCAAGACATTTGCATTCCAGATATGAATCAGTCCATAATCCCATCAAACCAAGGAGCAGAACATGTGGATTTTCTTGAAAGTAATTTTCTACCTAATAACAATCAAGAAGTTTATATCCCAGTTATGGATCAGGATGAAGTTTACAATCCAAATCAAAATCATTATGAGAACCAACAAGGATTCATTGACGAGATGATGAAATATGCTGAGAAAACAAGTTTTCCTTGGATGGTAGAGAACCACTGTTATAATCACAACCAGTAA
Protein Sequence
- >AT2G28700.1
MARKKLNLTYIFNDRMRKRSFKQRREGFLKKLNDLKVLCDVNACAVVYNPFNSNPDVWPSKSEVNNIIKKFEMLPETQKKVKSVNHEEFLNLYISKVEKQSKKLIVENKETCLKEVMFKCLGGNMGDFVMNDNDRLDLCKFIDHYLRNLYHHKNVTLNNPNFEIGESSSLMDMAPTATTGNMATTVVDEGMTPLLIAEGSSSSFLNSPLFNSPQLTNELQLIVSQNHRLENSLASNLFFSEGQDICIPDMNQSIIPSNQGAEHVDFLESNFLPNNNQEVYIPVMDQDEVYNPNQNHYENQQGFIDEMMKYAEKTSFPWMVENHCYNHNQ