Information report for AT2G28670
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- GO:0010345 — acts upstream of or within — suberin biosynthetic process
- GO:0009809 — acts upstream of or within — lignin biosynthetic process
- GO:0048226 — located in — Casparian strip
- GO:0005634 — located in — nucleus
- CS2106042 — increased levels of suberin, disordered casparian strip and altered levels of several ions in the leaves
Functional Keywords
Literature and News
- The FHY3 and FAR1 genes encode transposase-related proteins involved in regulation of gene expression by the phytochrome A-signaling pathway. DOI: 10.1046/j.1365-313x.2003.01741.x ; PMID: 12753585
- Comprehensive comparison of auxin-regulated and brassinosteroid-regulated genes in Arabidopsis. DOI: 10.1104/pp.103.034736 ; PMID: 15047898
- Root suberin forms an extracellular barrier that affects water relations and mineral nutrition in Arabidopsis. DOI: 10.1371/journal.pgen.1000492 ; PMID: 19461889
- Dirigent proteins in conifer defense II: Extended gene discovery, phylogeny, and constitutive and stress-induced gene expression in spruce (Picea spp.). DOI: 10.1016/j.phytochem.2007.04.042 ; PMID: 17590394
- Water and solute permeabilities of Arabidopsis roots in relation to the amount and composition of aliphatic suberin. DOI: 10.1093/jxb/erq389 ; PMID: 21421706
- Acyl-lipid metabolism. DOI: 10.1199/tab.0161 ; PMID: 23505340
- Dirigent domain-containing protein is part of the machinery required for formation of the lignin-based Casparian strip in the root. DOI: 10.1073/pnas.1308412110 ; PMID: 23940370
- The MYB36 transcription factor orchestrates Casparian strip formation. DOI: 10.1073/pnas.1507691112 ; PMID: 26124109
Gene Resources
- UniProt: A0A2H1ZE31
- EMBL: CP002685
- AlphaFoldDB: A0A2H1ZE31
- EnsemblPlants: AT2G28670.1
- Gramene: AT2G28670.1
- ExpressionAtlas: AT2G28670
- InterPro: IPR004265, IPR044859
- PANTHER: PTHR46215, PTHR46215:SF25
- Gene3D: 2.40.480.10
- OrthoDB: A0A2H1ZE31
- SWISS-MODEL: A0A2H1ZE31
Homologs
- Glycine max Glyma.11G144000, Glyma.11G144200
- Gossypium hirsutum Gohir.D05G299300
- Populus trichocarpa POPTR_008G049200v3, POPTR_010G211800v3
Sequences
cDNA Sequence
- >AT2G28670.1
ATGGCTGGTCAAAAGATACTTTCTTTACTGGTTATAGCTCTTGTTGTTACTTTTGCAGCTGCGGCTCGGCTTCTTGATGAAGAAAATGCATTCTCAGCTACCACAACCACCCTTGGCTCAGGTTCAGGTTCCACCGGAATTGGTTTTGGTGCAGGAACAGGGTCAAGTGGTTCAGGTTCCACGGGATTCGGTTTTGGTGCAGGATCAGGGTCATCTGGTTCAGGTTCTACTGGAAGCGGTCTCGGTGCAGGTACAGGGTCAATACCATCAAGTGGTTCAGGTCCTGGTCTTCTACCAACTGCCAGTTCTGTTCCTGGTTCTTTAGCGGGTGGTGGTTCAGGTTCCTTGCCTACCACTGGTTCAGCCACTGGTGCAGGTGCAGGTACCGGTTCAGCTCTTGGAGGTGGTCCAGGTGCTGGCTCAGCTCTTGGTGGTGGTGCGGGTGCCGGTCCAGCTCTTGGTGGTGGTGCGGGTGCCGGTCCAGCTCTTGGTGGTGGTGCAGGTGCTGGTTCAGCTCTTGGTGGTGGTGGTGCAGGTGCTGGTCCAGCTCTTGGTGGTGGTGTTGCAGGTTCTGGTTCAGCTCTTGGTGGTGGTGCAAGTGCTGGTCCTGACAATACGTTGGTATTTTTTATGCATGATATACTCGGTGGTTCAAATCCCACTGCCAGAGCCGTAACTGGAGTCGTCGCAAATCCGGCTTTAAGCGGGCAACTTCCATTTGCTAAACCCAACGGCGCAAACCTTCCTGTAAGCAACGGAGTTCCGTCAAACAACAACAACAATGGGATTGTCAACAACAACAATGTCCCTTTCCTCGTTGGACTCGGCGGAACCACAGCTAACATTCTCCAGAACAACAATAACGGAAACAACATTTTAAATGGTTTCCCTGTTGCTAGTGGCGGTCAGCTCCCGAGCGGTTCTGCTCTTCAGATGCTAATGTTCGGGACAATGACAGTAATCGATGATGAACTAACTGAAGGCCATGAGCTCGGATCTGGCTTACTCGGGAAAGCGCAGGGATATTATGTGGCGAGTGCAATTGACGGAACTAGCCAGACAATGGCTTTCACCGCGATGTTTGAAAGCGGCGGTTATGAAGATAGTATAAGCTTCTTTGGGGTTCTCAGAACAGCGGTATCAGAATCGCATATAGGAGTAATGGGAGGTACCGGAAAGTATGTGAATGCGAGGGGATTCGCGATTCTGAAGACGTTTACAGGATCTAGCGGGACGCAGCAGAATCAGCCGCATCAGTTCACTGATGGGCTTGAGACTGTTGTTGAGTGTACCGTTTATCTTTCTTACTAG - >AT2G28670.2
ATGGCTGGTCAAAAGATACTTTCTTTACTGGTTATAGCTCTTGTTGTTACTTTTGCAGCTGCGGCTCGGCTTCTTGATGAAGAAAATGCATTCTCAGCTACCACAACCACCCTTGGCTCAGGTTCAGGTTCCACCGGAATTGGTTTTGGTGCAGGAACAGGGTCAAGTGGTTCAGGTTCCACGGGATTCGGTTTTGGTGCAGGATCAGGGTCATCTGGTTCAGGTTCTACTGGAAGCGGTCTCGGTGCAGGTACAGGGTCAATACCATCAAGTGGTTCAGGTCCTGGTCTTCTACCAACTGCCAGTTCTGTTCCTGGTTCTTTAGCGGGTGGTGGTTCAGGTTCCTTGCCTACCACTGGTTCAGCCACTGGTGCAGGTGCAGGTACCGGTTCAGCTCTTGGAGGTGGTCCAGGTGCTGGCTCAGCTCTTGGTGGTGGTGCGGGTGCCGGTCCAGCTCTTGGTGGTGGTGCGGGTGCCGGTCCAGCTCTTGGTGGTGGTGCAGGTGCTGGTTCAGCTCTTGGTGGTGGTGGTGCAGGTGCTGGTCCAGCTCTTGGTGGTGGTGTTGCAGGTTCTGGTTCAGCTCTTGGTGGTGGTGCAAGTGCTGGTCCTGACAATACGTTGGTATTTTTTATGCATGATATACTCGGTGGTTCAAATCCCACTGCCAGAGCCGTAACTGGAGTCGTCGCAAATCCGGCTTTAAGCGGGCAACTTCCATTTGCTAAACCCAACGGCGCAAACCTTCCTGTAAGCAACGGAGTTCCGTCAAACAACAACAACAATGGGATTGTCAACAACAACAATGTCCCTTTCCTCGTTGGACTCGGCGGAACCACAGCTAACATTCTCCAGAACAACAATAACGGAAACAACATTTTAAATGGTTTCCCTGTTGCTAGTGGCGGTCAGCTCCCGAGCGGTTCTGCTCTTCAGATGCTAATGTTCGGGACAATGACAGTAATCGATGATGAACTAACTGAAGGCCATGAGCTCGGATCTGGCTTACTCGGGAAAGCGCAGGGATATTATGTGGCGAGTGCAATTGACGGAACTAGCCAGACAATGGCTTTCACCGCGATGTTTGAAAGCGGCGGTTATGAAGATAGTATAAGCTTCTTTGGGGTTCTCAGAACAGCGGTATCAGAATCGCATATAGGAGTAATGGGAGGTACCGGAAAGTATGTGAATGCGAGGGGATTCGCGATTCTGAAGACGTTTACAGGATCTAGCGGGACGCAGCAGAATCAGCCGCATCAGTTCACTGATGGGCTTGAGACTGTTGTTGAGTGTACCGTTTATCTTTCTTACTAG
CDS Sequence
- >AT2G28670.1
ATGGCTGGTCAAAAGATACTTTCTTTACTGGTTATAGCTCTTGTTGTTACTTTTGCAGCTGCGGCTCGGCTTCTTGATGAAGAAAATGCATTCTCAGCTACCACAACCACCCTTGGCTCAGGTTCAGGTTCCACCGGAATTGGTTTTGGTGCAGGAACAGGGTCAAGTGGTTCAGGTTCCACGGGATTCGGTTTTGGTGCAGGATCAGGGTCATCTGGTTCAGGTTCTACTGGAAGCGGTCTCGGTGCAGGTACAGGGTCAATACCATCAAGTGGTTCAGGTCCTGGTCTTCTACCAACTGCCAGTTCTGTTCCTGGTTCTTTAGCGGGTGGTGGTTCAGGTTCCTTGCCTACCACTGGTTCAGCCACTGGTGCAGGTGCAGGTACCGGTTCAGCTCTTGGAGGTGGTCCAGGTGCTGGCTCAGCTCTTGGTGGTGGTGCGGGTGCCGGTCCAGCTCTTGGTGGTGGTGCGGGTGCCGGTCCAGCTCTTGGTGGTGGTGCAGGTGCTGGTTCAGCTCTTGGTGGTGGTGGTGCAGGTGCTGGTCCAGCTCTTGGTGGTGGTGTTGCAGGTTCTGGTTCAGCTCTTGGTGGTGGTGCAAGTGCTGGTCCTGACAATACGTTGGTATTTTTTATGCATGATATACTCGGTGGTTCAAATCCCACTGCCAGAGCCGTAACTGGAGTCGTCGCAAATCCGGCTTTAAGCGGGCAACTTCCATTTGCTAAACCCAACGGCGCAAACCTTCCTGTAAGCAACGGAGTTCCGTCAAACAACAACAACAATGGGATTGTCAACAACAACAATGTCCCTTTCCTCGTTGGACTCGGCGGAACCACAGCTAACATTCTCCAGAACAACAATAACGGAAACAACATTTTAAATGGTTTCCCTGTTGCTAGTGGCGGTCAGCTCCCGAGCGGTTCTGCTCTTCAGATGCTAATGTTCGGGACAATGACAGTAATCGATGATGAACTAACTGAAGGCCATGAGCTCGGATCTGGCTTACTCGGGAAAGCGCAGGGATATTATGTGGCGAGTGCAATTGACGGAACTAGCCAGACAATGGCTTTCACCGCGATGTTTGAAAGCGGCGGTTATGAAGATAGTATAAGCTTCTTTGGGGTTCTCAGAACAGCGGTATCAGAATCGCATATAGGAGTAATGGGAGGTACCGGAAAGTATGTGAATGCGAGGGGATTCGCGATTCTGAAGACGTTTACAGGATCTAGCGGGACGCAGCAGAATCAGCCGCATCAGTTCACTGATGGGCTTGAGACTGTTGTTGAGTGTACCGTTTATCTTTCTTACTAG - >AT2G28670.2
ATGGCTGGTCAAAAGATACTTTCTTTACTGGTTATAGCTCTTGTTGTTACTTTTGCAGCTGCGGCTCGGCTTCTTGATGAAGAAAATGCATTCTCAGCTACCACAACCACCCTTGGCTCAGGTTCAGGTTCCACCGGAATTGGTTTTGGTGCAGGAACAGGGTCAAGTGGTTCAGGTTCCACGGGATTCGGTTTTGGTGCAGGATCAGGGTCATCTGGTTCAGGTTCTACTGGAAGCGGTCTCGGTGCAGGTACAGGGTCAATACCATCAAGTGGTTCAGGTCCTGGTCTTCTACCAACTGCCAGTTCTGTTCCTGGTTCTTTAGCGGGTGGTGGTTCAGGTTCCTTGCCTACCACTGGTTCAGCCACTGGTGCAGGTGCAGGTACCGGTTCAGCTCTTGGAGGTGGTCCAGGTGCTGGCTCAGCTCTTGGTGGTGGTGCGGGTGCCGGTCCAGCTCTTGGTGGTGGTGCGGGTGCCGGTCCAGCTCTTGGTGGTGGTGCAGGTGCTGGTTCAGCTCTTGGTGGTGGTGGTGCAGGTGCTGGTCCAGCTCTTGGTGGTGGTGTTGCAGGTTCTGGTTCAGCTCTTGGTGGTGGTGCAAGTGCTGGTCCTGACAATACGTTGGTATTTTTTATGCATGATATACTCGGTGGTTCAAATCCCACTGCCAGAGCCGTAACTGGAGTCGTCGCAAATCCGGCTTTAAGCGGGCAACTTCCATTTGCTAAACCCAACGGCGCAAACCTTCCTGTAAGCAACGGAGTTCCGTCAAACAACAACAACAATGGGATTGTCAACAACAACAATGTCCCTTTCCTCGTTGGACTCGGCGGAACCACAGCTAACATTCTCCAGAACAACAATAACGGAAACAACATTTTAAATGGTTTCCCTGTTGCTAGTGGCGGTCAGCTCCCGAGCGGTTCTGCTCTTCAGATGCTAATGTTCGGGACAATGACAGTAATCGATGATGAACTAACTGAAGGCCATGAGCTCGGATCTGGCTTACTCGGGAAAGCGCAGGGATATTATGTGGCGAGTGCAATTGACGGAACTAGCCAGACAATGGCTTTCACCGCGATGTTTGAAAGCGGCGGTTATGAAGATAGTATAAGCTTCTTTGGGGTTCTCAGAACAGCGGTATCAGAATCGCATATAGGAGTAATGGGAGGTACCGGAAAGTATGTGAATGCGAGGGGATTCGCGATTCTGAAGACGTTTACAGGATCTAGCGGGACGCAGCAGAATCAGCCGCATCAGTTCACTGATGGGCTTGAGACTGTTGTTGAGTGTACCGTTTATCTTTCTTACTAG
Protein Sequence
- >AT2G28670.1
MAGQKILSLLVIALVVTFAAAARLLDEENAFSATTTTLGSGSGSTGIGFGAGTGSSGSGSTGFGFGAGSGSSGSGSTGSGLGAGTGSIPSSGSGPGLLPTASSVPGSLAGGGSGSLPTTGSATGAGAGTGSALGGGPGAGSALGGGAGAGPALGGGAGAGPALGGGAGAGSALGGGGAGAGPALGGGVAGSGSALGGGASAGPDNTLVFFMHDILGGSNPTARAVTGVVANPALSGQLPFAKPNGANLPVSNGVPSNNNNNGIVNNNNVPFLVGLGGTTANILQNNNNGNNILNGFPVASGGQLPSGSALQMLMFGTMTVIDDELTEGHELGSGLLGKAQGYYVASAIDGTSQTMAFTAMFESGGYEDSISFFGVLRTAVSESHIGVMGGTGKYVNARGFAILKTFTGSSGTQQNQPHQFTDGLETVVECTVYLSY - >AT2G28670.2
MAGQKILSLLVIALVVTFAAAARLLDEENAFSATTTTLGSGSGSTGIGFGAGTGSSGSGSTGFGFGAGSGSSGSGSTGSGLGAGTGSIPSSGSGPGLLPTASSVPGSLAGGGSGSLPTTGSATGAGAGTGSALGGGPGAGSALGGGAGAGPALGGGAGAGPALGGGAGAGSALGGGGAGAGPALGGGVAGSGSALGGGASAGPDNTLVFFMHDILGGSNPTARAVTGVVANPALSGQLPFAKPNGANLPVSNGVPSNNNNNGIVNNNNVPFLVGLGGTTANILQNNNNGNNILNGFPVASGGQLPSGSALQMLMFGTMTVIDDELTEGHELGSGLLGKAQGYYVASAIDGTSQTMAFTAMFESGGYEDSISFFGVLRTAVSESHIGVMGGTGKYVNARGFAILKTFTGSSGTQQNQPHQFTDGLETVVECTVYLSY