Information report for AT2G28650
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
- GO:0005546 — enables — phosphatidylinositol-4,5-bisphosphate binding
- GO:0006887 — involved in — exocytosis
- GO:0000145 — part of — exocyst
Functional Keywords
- shoot axis apex , root , shoot system , plant embryo , vascular leaf , stamen , sepal , flower , inflorescence flower pedicel , cotyledon , petiole , hypocotyl , leaf apex , collective leaf structure , pollen , plant sperm cell , pollen
Literature and News
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- Development of Arabidopsis whole-genome microarrays and their application to the discovery of binding sites for the TGA2 transcription factor in salicylic acid-treated plants. DOI: 10.1111/j.1365-313X.2006.02770.x ; PMID: 16824183
- AtEXO70A1, a member of a family of putative exocyst subunits specifically expanded in land plants, is important for polar growth and plant development. DOI: 10.1111/j.1365-313X.2006.02854.x ; PMID: 16942608
- Expression and functional analyses of EXO70 genes in Arabidopsis implicate their roles in regulating cell type-specific exocytosis. DOI: 10.1104/pp.110.164178 ; PMID: 20943851
- Tethering Complexes in the Arabidopsis Endomembrane System. DOI: 10.3389/fcell.2016.00046 ; PMID: 27243010
Gene Resources
- UniProt: Q9SIB0
- EMBL: AC007171, AK118418, BT030343
- AlphaFoldDB: Q9SIB0
- EnsemblPlants: AT2G28650.1
- Gramene: AT2G28650.1
- KEGG: ath:AT2G28650
- Orthologous matrix: IHRWISP
- ExpressionAtlas: AT2G28650
- InterPro: IPR004140, IPR016159, IPR046364
- PANTHER: PTHR12542, PTHR12542:SF17
- SUPFAM: SSF74788
- Gene3D: 1.20.1280.170
- OrthoDB: Q9SIB0
- SWISS-MODEL: Q9SIB0
Homologs
- Cicer arietinum XP_004490670.1, XP_004490669.1, XP_004490668.1
- Cucumis sativus CsExo70B
- Malus domestica MDP0000263576
- Manihot esculenta Manes.07G086200
- Medicago truncatula Medtr5g073620.1
- Nicotiana benthamiana Niben101Scf04608g05035.1
- Oryza sativa OsExo70-F2, OsExo70-F3, RLS2;OsEXO70A1, OsExo70B1
Sequences
cDNA Sequence
- >AT2G28650.1
GTTTTTGTTATTCTATAAAGAATCATATCATAAAAACAGAGCATAACCACTATAAATACTGTTTCCATACAAAATCATCATGTACACATAAAAAAATCACCAAACACAAAAATGGTACTCTTCACTTTATCAACAACTTCTTCTTCTTCTTCTAAGCTAAAACAACATTCACACCAAAGCTTCTCAGAGTCTCTAATGGAACACACTATCGAAGACGCTGAATCCATCATCCATCGATGGATTTCACCAGAACACGTCCACTCTTCTTCCTTCTGCTTCATCTCATCGCTATTTTCAACCGAAAACCGCGAAGAAGCGAAACGATTCATCGACGCTGTTACCACCTTACACTCCGGTATGATAAGACTAATCTCAGTGAATCCAACGTCAATGAAACTCGTTAAAGCAGAGAATCTAATGCGTATCTCAATGACTCATCTCTCCAAAGAGTTTTACCGCATTCTCAAATCGAACCGACGTTATCTCGACCCCGAATCCGTCTCTATCCGTTCTTCAAAAGCTTCCGATTCCGACTCCGATTCCGATTCCAACACCATGGATGATCTAAAGATGATCGCGGATTGTATGATATCATCTGGCTACAGCAAAGAATGCTTTAAAATCTACAAAAGAATCCGTAAATCGATCATTAACGAAGCGTTAAACCAACTCGGATTCGAGAATTTAACGTTTTCGCAGATTCAGAAACTTGAATGGGAAGTTATGGAGAAGAAGATACGTAAATGGTTAAGAACAACAACAAGAGCAGTGAATACTCTGTTTTCCGGTGAACAAATCCTCTCCGATCATGTCTTCTCTTCATCATCATCAACAATTCGTGAATCTGCATTTGCAGAAATCACATCACAAACCGCTTTAGCTTTGTTCACTTTCCCGGAAAAAATGGCGAAATGTCGAAAATCTCCGGAGAAGATCTTCCTCACTCTCGATGTTTATCAAACGATCGTTGATCTATTACCTAAGATCAACGAACTCTTTAGCTCTGATTCAACCTCCACCGTTAGATCACAAGTCGATTTAACATTAGTGAATCTCAGAGAAGGTGTGGTTTCGATGATCGACGAGTTCGAATCTTCGATTTCGAAAGAATCATCGAAATCGTTAATCTCCGGTGGTGGAATTCATCAATTGACAAGGTATGTAATGAATTTCATCGTCTTCCTCGCTGATTACAGTGATACACTCTCCGATATCATCTCGAAACCGTCGTTACCTTCACCGGAAGAAGAAAAAGACTCCGGAGATTCGTCACCGGTGAAATCACGAATCTCGAGGTTGATTTTGTTCTTACTCTGTAAAATCGACGCCAAGTCTCGTCTCTATAACGACGTAGCTCTCTCGTATCTGTTTTTGATTAATAACGTTAATTACGTTGTTGTTAAAGTCCGATCTTCGAATTTGAAGACGGTTTTGAGTGAGGATTGGGTTAAGAAGCATGAAGCGAAGGTGAAGAAGTATGTGGCGAAGTTTGAGGAGATTGTTTGGGGAGAGATGATGACGTCACTTTCTGATGATGTGACGATGACTGCGGAGGAAGGGATTAAGCGGTTTAGTGATGGGTTTGAGGAAGCGTATAAGAGACAAACCGGTTGGATTGTACCGGATTCGAAATTGAGAGATGAGATTAAACGGTCTGTTGGGATGATGATTATACCGAGATATTCCGGGTTTTGTGAAAGGAACCGGGTCAGGTTATTGGAGAATGTCGGATTTGACCCTGAGGATATTGGGAATTATCTTTCGGATTTGTATTTTGGGTCTGGTGGATCAGGGAGTGGTTCGTCAGTTCATTCTTCGGGTTCTTCTGTTTAACACGTTTGTGATGATTTAATTTATATTGATAAGTAAATAATATTGGTATTTGATATCTTGTCCCAAAAATAGAAAGTAAATATATTGATGTAATTATTTTGGAAGCTA
CDS Sequence
- >AT2G28650.1
ATGGTACTCTTCACTTTATCAACAACTTCTTCTTCTTCTTCTAAGCTAAAACAACATTCACACCAAAGCTTCTCAGAGTCTCTAATGGAACACACTATCGAAGACGCTGAATCCATCATCCATCGATGGATTTCACCAGAACACGTCCACTCTTCTTCCTTCTGCTTCATCTCATCGCTATTTTCAACCGAAAACCGCGAAGAAGCGAAACGATTCATCGACGCTGTTACCACCTTACACTCCGGTATGATAAGACTAATCTCAGTGAATCCAACGTCAATGAAACTCGTTAAAGCAGAGAATCTAATGCGTATCTCAATGACTCATCTCTCCAAAGAGTTTTACCGCATTCTCAAATCGAACCGACGTTATCTCGACCCCGAATCCGTCTCTATCCGTTCTTCAAAAGCTTCCGATTCCGACTCCGATTCCGATTCCAACACCATGGATGATCTAAAGATGATCGCGGATTGTATGATATCATCTGGCTACAGCAAAGAATGCTTTAAAATCTACAAAAGAATCCGTAAATCGATCATTAACGAAGCGTTAAACCAACTCGGATTCGAGAATTTAACGTTTTCGCAGATTCAGAAACTTGAATGGGAAGTTATGGAGAAGAAGATACGTAAATGGTTAAGAACAACAACAAGAGCAGTGAATACTCTGTTTTCCGGTGAACAAATCCTCTCCGATCATGTCTTCTCTTCATCATCATCAACAATTCGTGAATCTGCATTTGCAGAAATCACATCACAAACCGCTTTAGCTTTGTTCACTTTCCCGGAAAAAATGGCGAAATGTCGAAAATCTCCGGAGAAGATCTTCCTCACTCTCGATGTTTATCAAACGATCGTTGATCTATTACCTAAGATCAACGAACTCTTTAGCTCTGATTCAACCTCCACCGTTAGATCACAAGTCGATTTAACATTAGTGAATCTCAGAGAAGGTGTGGTTTCGATGATCGACGAGTTCGAATCTTCGATTTCGAAAGAATCATCGAAATCGTTAATCTCCGGTGGTGGAATTCATCAATTGACAAGGTATGTAATGAATTTCATCGTCTTCCTCGCTGATTACAGTGATACACTCTCCGATATCATCTCGAAACCGTCGTTACCTTCACCGGAAGAAGAAAAAGACTCCGGAGATTCGTCACCGGTGAAATCACGAATCTCGAGGTTGATTTTGTTCTTACTCTGTAAAATCGACGCCAAGTCTCGTCTCTATAACGACGTAGCTCTCTCGTATCTGTTTTTGATTAATAACGTTAATTACGTTGTTGTTAAAGTCCGATCTTCGAATTTGAAGACGGTTTTGAGTGAGGATTGGGTTAAGAAGCATGAAGCGAAGGTGAAGAAGTATGTGGCGAAGTTTGAGGAGATTGTTTGGGGAGAGATGATGACGTCACTTTCTGATGATGTGACGATGACTGCGGAGGAAGGGATTAAGCGGTTTAGTGATGGGTTTGAGGAAGCGTATAAGAGACAAACCGGTTGGATTGTACCGGATTCGAAATTGAGAGATGAGATTAAACGGTCTGTTGGGATGATGATTATACCGAGATATTCCGGGTTTTGTGAAAGGAACCGGGTCAGGTTATTGGAGAATGTCGGATTTGACCCTGAGGATATTGGGAATTATCTTTCGGATTTGTATTTTGGGTCTGGTGGATCAGGGAGTGGTTCGTCAGTTCATTCTTCGGGTTCTTCTGTTTAA
Protein Sequence
- >AT2G28650.1
MVLFTLSTTSSSSSKLKQHSHQSFSESLMEHTIEDAESIIHRWISPEHVHSSSFCFISSLFSTENREEAKRFIDAVTTLHSGMIRLISVNPTSMKLVKAENLMRISMTHLSKEFYRILKSNRRYLDPESVSIRSSKASDSDSDSDSNTMDDLKMIADCMISSGYSKECFKIYKRIRKSIINEALNQLGFENLTFSQIQKLEWEVMEKKIRKWLRTTTRAVNTLFSGEQILSDHVFSSSSSTIRESAFAEITSQTALALFTFPEKMAKCRKSPEKIFLTLDVYQTIVDLLPKINELFSSDSTSTVRSQVDLTLVNLREGVVSMIDEFESSISKESSKSLISGGGIHQLTRYVMNFIVFLADYSDTLSDIISKPSLPSPEEEKDSGDSSPVKSRISRLILFLLCKIDAKSRLYNDVALSYLFLINNVNYVVVKVRSSNLKTVLSEDWVKKHEAKVKKYVAKFEEIVWGEMMTSLSDDVTMTAEEGIKRFSDGFEEAYKRQTGWIVPDSKLRDEIKRSVGMMIIPRYSGFCERNRVRLLENVGFDPEDIGNYLSDLYFGSGGSGSGSSVHSSGSSV