Gene Details:
- Gene ID: AT2G28625
- Gene Symbol: PCA22
- Gene Name: PROLINE CONTENT ALTERNATIVE 22
- Description: hypothetical protein;(source:Araport11)
- TAIR Accession: locus:1006230177
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Gene Ontology:
- GO:2000214 — acts upstream of or within — regulation of proline metabolic process
- GO:0080092 — acts upstream of or within — regulation of pollen tube growth
- GO:0009414 — acts upstream of or within — response to water deprivation
- GO:0071215 — acts upstream of or within — cellular response to abscisic acid stimulus
- GO:0003674 — enables — molecular_function
- GO:0005634 — located in — nucleus
- GO:0005737 — located in — cytoplasm
Germplasm Phenotype:
- pca22 atrzf1 — Proline content significantly lower than atrzf1 single mutant. The addition of the pca22 dominant mutation suppresses the dehydration- and ABA-insensitive phenotype of the atrzf1 mutant.
Literature:
- Whole genome shotgun sequencing of Brassica oleracea and its application to gene discovery and annotation in Arabidopsis. DOI: 10.1101/gr.3176505 ; PMID: 15805490
- A conserved role for kinesin-5 in plant mitosis. DOI: 10.1242/jcs.009506 ; PMID: 17652157
- PCA22 acts as a suppressor of atrzf1 to mediate proline accumulation in response to abiotic stress in Arabidopsis. DOI: 10.1093/jxb/erx069 ; PMID: 28369480
Sequences:
cDNA Sequence
- >AT2G28625.1
CCGTTAGGTTTAACACCTAAGTTTCAAAATTTTCCCGGGAGACAAGAAAGATTCAAAACACAAAGCAGAGAGAGAAAGAGAGAGAAAGATCAATGGAAAAATGAACGAAGAGGAGAGAGTTGGTTCATCGTCGTCTTCTTCATCTTCTCTTCCTGTGAGCTACGGAGTTGACTGTGAAAAATATGACTTCTCTTCCTCTGTTTCTTCTCTGTCTCAACCATTTTCTCCTGAAGGTTCAAGCAACAAGAGTCACGTTCTTGAAAACAATCTTTCTTTTGTTTTCTCGTTGGACCATAATAGCAACAGCAGTCTCATGTTTCCTAGAGATAGACCATGTTCTTGTCTCCACCATGTCTTCGAGTGGATTCTACAGAGATGTTGTGGTTGCCTTTGTTAGCTGTCATTCTTCCTCTTTCAGACTTAACATACCATTGTATCTTGTGCCCGATCCAGTAACTTCGATTCTAGCAACCTAAAACACATCATTCATGCTATAAAAGATATGTTTGTGAATTTTTCCAATTGTATCTCTTTTGATTTTCTTGAAGGGACAATATATTGATTTAGCTGTACAGTATATCTATTTAGTTGAACCAAAAAAAAAGAAAATAAAAGCTCTATATCAAATTTTGTGTAAGTAGTAAATTATGTTTTAGTTTTTTGCTAGT
CDS Sequence
- >AT2G28625.1
ATGAACGAAGAGGAGAGAGTTGGTTCATCGTCGTCTTCTTCATCTTCTCTTCCTGTGAGCTACGGAGTTGACTGTGAAAAATATGACTTCTCTTCCTCTGTTTCTTCTCTGTCTCAACCATTTTCTCCTGAAGGTTCAAGCAACAAGAGTCACGTTCTTGAAAACAATCTTTCTTTTGTTTTCTCGTTGGACCATAATAGCAACAGCAGTCTCATGTTTCCTAGAGATAGACCATGTTCTTGTCTCCACCATGTCTTCGAGTGGATTCTACAGAGATGTTGTGGTTGCCTTTGTTAG
Protein Sequence
- >AT2G28625.1
MNEEERVGSSSSSSSSLPVSYGVDCEKYDFSSSVSSLSQPFSPEGSSNKSHVLENNLSFVFSLDHNSNSSLMFPRDRPCSCLHHVFEWILQRCCGCLC