Information report for AT2G28420
Gene Details
|
|
Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- GO:0003674 — enables — molecular_function
- GO:0005737 — located in — cytoplasm
Functional Keywords
Literature and News
- DNA array analyses of Arabidopsis thaliana lacking a vacuolar Na+/H+ antiporter: impact of AtNHX1 on gene expression. DOI: 10.1111/j.1365-313X.2004.02253.x ; PMID: 15546358
- Computational and experimental analysis identifies Arabidopsis genes specifically expressed during early seed development. DOI: 10.1186/1471-2164-7-38 ; PMID: 16504176
- ANAC012, a member of the plant-specific NAC transcription factor family, negatively regulates xylary fiber development in Arabidopsis thaliana. DOI: 10.1111/j.1365-313X.2007.03109.x ; PMID: 17565617
- Genome-wide analysis of rice and Arabidopsis identifies two glyoxalase genes that are highly expressed in abiotic stresses. DOI: 10.1007/s10142-010-0203-2 ; PMID: 21213008
- Dissecting the Physiological Function of Plant Glyoxalase I and Glyoxalase I-Like Proteins. DOI: 10.3389/fpls.2018.01618 ; PMID: 30483284
Gene Resources
- UniProt: Q9SKM8
- EMBL: AC006283, CP002685
- AlphaFoldDB: Q9SKM8
- EnsemblPlants: AT2G28420.1
- Gramene: AT2G28420.1
- KEGG: ath:AT2G28420
- Orthologous matrix: EMRIRYM
- ExpressionAtlas: AT2G28420
- InterPro: IPR004360, IPR029068, IPR037523
- PANTHER: PTHR46142, PTHR46142:SF8
- SUPFAM: SSF54593
- PROSITE: PS51819
- Gene3D: 3.10.180.10
- SWISS-MODEL: Q9SKM8
- Conserved Domain Database: cd07245
Homologs
- Oryza sativa OsGlyI
Sequences
cDNA Sequence
- >AT2G28420.1
TTTTTTTTGTCGAAGTCTTAATTAACTTCAACATCTAATGGATCCCAAATTCTAGATATAACTTTTTACTTTTTCAACAAGGTAAACACACATCTAGTCTAGATGACCATGTGACACTCGCCATCGCCTTTGCTATACGGTTATGGACCTATCCAATAGAAAATGATGCGAAGGTGTGTGAAGAGTGACACGTGAACGATGTGTGCTTACACATGCAAGCTTCCTATTCAGCCGTCCGTCACGTGTCGTTGATTTAGTCCCCACCGCTCCCGCTTTTTAAAGTTAACTCTTTGTTGCTTCTATACGAAGTAAGCTTTGTCTCGTCGGAATCTGATGGAGGAGAAGAAGAAGAAAGGCGATGATGAATTGAACTCGAAACCGCCGTTAATGGCGTTGAACCATGTGTCAAGGCTTTGTAAAGACGTCAAAAAGTCTCTCGAGTTCTACACAAAGGTATTAGGGTTCGTGGAGATAGAGCGTCCAGCTTCTTTCGACTTCGACGGTGCGTGGCTTTTCAACTACGGCGTTGGGATCCACTTGGTGCAGGCCAAGGACCAAGATAAGTTACCTTCTGACACGGACCATTTGGACCCAATGGATAACCACATCTCTTTCCAGTGTGAAGATATGGAAGCTTTGGAGAAGAGGCTCAAGGAGGTGAAGGTAAAGTACATCAAGAGGACGGTGGGTGATGAGAAAGATGCAGCTATCGACCAGCTCTTCTTCAATGACCCTGACGGCTTTATGGTTGAAATCTGTAACTGCGAGAATCTCGAACTTGTCCCGTGCCATTCAGCCGACGCCATACGCCTCCCAGAAGACCGACATGCACCTCCTGTTGCCCTCCCTGACTCCTCCAACCGTAGGATGCCCCAGCCCAATTCTTAATACTATTTAGACTCGTTTCGTCTCTAGTTAGTACTGTGTTGTGCTCAGCTCCCACTCTATTAGTTAATGTTTGTTTGGGACACCAAGTCCTTCCAACCATGAGTGCTAGTAGGCTGGCCATTTTGGTTTTTGTTTAGATTCGGTTTGGTTCAGTTTTAATAAATCTCTGGCTGAACTCTAACCGAAGTTATTTCGCTTTTGGTTTGGTTTTACTTTGGTTCGGTTTCCATTTGGTTAGGTTTGTTTTAGTTTGTTCCAAAAAAACCGTGAACAAAAATTCTGATGTTTTTTTCTCAAACTGTTGCTT
CDS Sequence
- >AT2G28420.1
ATGGAGGAGAAGAAGAAGAAAGGCGATGATGAATTGAACTCGAAACCGCCGTTAATGGCGTTGAACCATGTGTCAAGGCTTTGTAAAGACGTCAAAAAGTCTCTCGAGTTCTACACAAAGGTATTAGGGTTCGTGGAGATAGAGCGTCCAGCTTCTTTCGACTTCGACGGTGCGTGGCTTTTCAACTACGGCGTTGGGATCCACTTGGTGCAGGCCAAGGACCAAGATAAGTTACCTTCTGACACGGACCATTTGGACCCAATGGATAACCACATCTCTTTCCAGTGTGAAGATATGGAAGCTTTGGAGAAGAGGCTCAAGGAGGTGAAGGTAAAGTACATCAAGAGGACGGTGGGTGATGAGAAAGATGCAGCTATCGACCAGCTCTTCTTCAATGACCCTGACGGCTTTATGGTTGAAATCTGTAACTGCGAGAATCTCGAACTTGTCCCGTGCCATTCAGCCGACGCCATACGCCTCCCAGAAGACCGACATGCACCTCCTGTTGCCCTCCCTGACTCCTCCAACCGTAGGATGCCCCAGCCCAATTCTTAA
Protein Sequence
- >AT2G28420.1
MEEKKKKGDDELNSKPPLMALNHVSRLCKDVKKSLEFYTKVLGFVEIERPASFDFDGAWLFNYGVGIHLVQAKDQDKLPSDTDHLDPMDNHISFQCEDMEALEKRLKEVKVKYIKRTVGDEKDAAIDQLFFNDPDGFMVEICNCENLELVPCHSADAIRLPEDRHAPPVALPDSSNRRMPQPNS