Gene Details:

• Gene ID: AT2G28350
• Gene Symbol: ARF10
• Gene Name: auxin response factor 10
• Description: auxin response factor 10;(source:Araport11)
• TAIR Accession: locus:2057517
• Genome: Araport11_genome_release
• Species: Arabidopsis thaliana

Transcripts:

• AT2G28350.1     AT2G28350.2

Plant Ontology Annotations:

• PO:0000037  — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
• PO:0008019  — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
• PO:0009005  — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
• PO:0009006  — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
• PO:0009009  — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
• PO:0009025  — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
• PO:0009029  — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
• PO:0009031  — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
• PO:0009046  — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
• PO:0009052  — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
• PO:0020030  — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
• PO:0020038  — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
• PO:0020100  — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
• PO:0020137  — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
• PO:0025022  — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
• PO:0025281  — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
• PO:0009049  — inflorescence — inflorescencia (Spanish, exact), 花序 (Japanese, exact), Triticeae spike (narrow)
• PO:0020031  — radicle — radícula (Spanish, exact), 幼根 (Japanese, exact)
• PO:0000084  — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)

Gene Ontology:

• GO:0048441  — acts upstream of or within — petal development
• GO:0010154  — acts upstream of or within — fruit development
• GO:0048829  — acts upstream of or within — root cap development
• GO:0009738  — acts upstream of or within — abscisic acid-activated signaling pathway
• GO:0006355  — involved in — regulation of DNA-templated transcription
• GO:0031540  — acts upstream of or within — regulation of anthocyanin biosynthetic process
• GO:0003700  — enables — DNA-binding transcription factor activity
• GO:0048366  — acts upstream of or within — leaf development
• GO:0048442  — acts upstream of or within — sepal development
• GO:0048589  — acts upstream of or within — developmental growth
• GO:0035198  — enables — miRNA binding
• GO:0009734  — acts upstream of or within — auxin-activated signaling pathway
• GO:0007389  — acts upstream of or within — pattern specification process
• GO:0051301  — acts upstream of or within — cell division
• GO:0005634  — located in — nucleus
• GO:0009743  — acts upstream of or within — response to carbohydrate
• GO:0005515  — enables — protein binding

Germplasm Phenotype:

• CS24611  — no obvious auxin-related growth phenotype

Function-related keywords:

• shoot axis apex ,  leaf lamina base ,  root ,  shoot system ,  plant embryo ,  vascular leaf ,  stamen ,  sepal ,  flower ,  inflorescence flower pedicel ,  cotyledon ,  petiole ,  hypocotyl ,  leaf apex ,  collective leaf structure ,  pollen ,  root ,  shoot system ,  vascular leaf ,  inflorescence ,  radicle ,  plant sperm cell

Literature:

• Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes.   DOI:  10.1126/science.290.5499.2105 ;  PMID:  11118137
• P1/HC-Pro, a viral suppressor of RNA silencing, interferes with Arabidopsis development and miRNA unction.   DOI:  10.1016/s1534-5807(03)00025-x ;  PMID:  12586064
• A genome-wide analysis of blue-light regulation of Arabidopsis transcription factor gene expression during seedling development.   DOI:  10.1104/pp.103.029439 ;  PMID:  14605227
• Comprehensive comparison of auxin-regulated and brassinosteroid-regulated genes in Arabidopsis.   DOI:  10.1104/pp.103.034736 ;  PMID:  15047898
• Viral RNA silencing suppressors inhibit the microRNA pathway at an intermediate step.   DOI:  10.1101/gad.1201204 ;  PMID:  15131083
• AtXRN4 degrades mRNA in Arabidopsis and its substrates include selected miRNA targets.   DOI:  10.1016/j.molcel.2004.06.006 ;  PMID:  15260969
• Contrasting modes of diversification in the Aux/IAA and ARF gene families.   DOI:  10.1104/pp.104.039669 ;  PMID:  15247399
• Functional genomic analysis of the AUXIN RESPONSE FACTOR gene family members in Arabidopsis thaliana: unique and overlapping functions of ARF7 and ARF19.   DOI:  10.1105/tpc.104.028316 ;  PMID:  15659631
• Antiquity of microRNAs and their targets in land plants.   DOI:  10.1105/tpc.105.032185 ;  PMID:  15849273
• Auxin and light control of adventitious rooting in Arabidopsis require ARGONAUTE1.   DOI:  10.1105/tpc.105.031625 ;  PMID:  15829601
• The cold-induced early activation of phospholipase C and D pathways determines the response of two distinct clusters of genes in Arabidopsis cell suspensions.   DOI:  10.1104/pp.105.068171 ;  PMID:  16258011
• Gibberellin mobilizes distinct DELLA-dependent transcriptomes to regulate seed germination and floral development in Arabidopsis.   DOI:  10.1104/pp.106.082289 ;  PMID:  16920880
• Selective targeting of miRNA-regulated plant development by a viral counter-silencing protein.   DOI:  10.1111/j.1365-313X.2007.03042.x ;  PMID:  17444907
• Common functions for diverse small RNAs of land plants.   DOI:  10.1105/tpc.107.051706 ;  PMID:  17601824
• Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection.   DOI:  10.1104/pp.108.121038 ;  PMID:  18650403
• Repression of transcription factors by microRNA during seed germination and postgerminaiton: Another level of molecular repression in seeds.   DOI:  10.4161/psb.3.1.4918 ;  PMID:  19704775
• The role of floral organs in carpels, an Arabidopsis loss-of-function mutation in MicroRNA160a, in organogenesis and the mechanism regulating its expression.   DOI:  10.1111/j.1365-313X.2010.04164.x ;  PMID:  20136729
• Auxin regulates distal stem cell differentiation in Arabidopsis roots.   DOI:  10.1073/pnas.1000672107 ;  PMID:  20543136
• Proper regeneration from in vitro cultured Arabidopsis thaliana requires the microRNA-directed action of an auxin response factor.   DOI:  10.1111/j.1365-313X.2012.04944.x ;  PMID:  22335436
• A set of Arabidopsis thaliana miRNAs involve shoot regeneration in vitro.   DOI:  10.4161/psb.23479 ;  PMID:  23333958
• Auxin controls seed dormancy through stimulation of abscisic acid signaling by inducing ARF-mediated ABI3 activation in Arabidopsis.   DOI:  10.1073/pnas.1304651110 ;  PMID:  23986496
• TAA1-regulated local auxin biosynthesis in the root-apex transition zone mediates the aluminum-induced inhibition of root growth in Arabidopsis.   DOI:  10.1105/tpc.114.127993 ;  PMID:  25052716
• Precise control of plant stem cell activity through parallel regulatory inputs.   DOI:  10.1242/dev.110148 ;  PMID:  25256342
• Germostatin resistance locus 1 encodes a PHD finger protein involved in auxin-mediated seed dormancy and germination.   DOI:  10.1111/tpj.13086 ;  PMID:  26611158
• Disruption of Germination and Seedling Development in Brassica napus by Mutations Causing Severe Seed Hormonal Imbalance.   DOI:  10.3389/fpls.2016.00322 ;  PMID:  27014334
• Repression of callus initiation by the miRNA-directed interaction of auxin-cytokinin in Arabidopsis thaliana.   DOI:  10.1111/tpj.13211 ;  PMID:  27189514
• Expression profiling of AUXIN RESPONSE FACTOR genes during somatic embryogenesis induction in Arabidopsis.   DOI:  10.1007/s00299-017-2114-3 ;  PMID:  28255787
• miR160 and miR166/165 Contribute to the LEC2-Mediated Auxin Response Involved in the Somatic Embryogenesis Induction in Arabidopsis.   DOI:  10.3389/fpls.2017.02024 ;  PMID:  29321785
• MicroRNA160 Modulates Plant Development and Heat Shock Protein Gene Expression to Mediate Heat Tolerance in Arabidopsis.   DOI:  10.3389/fpls.2018.00068 ;  PMID:  29449855
• Genome-wide profiling of sRNAs in the Verticillium dahliae-infected Arabidopsis roots.   DOI:  10.1080/21501203.2018.1426062 ;  PMID:  30181922
• Protein Levels of Several Arabidopsis Auxin Response Factors Are Regulated by Multiple Factors and ABA Promotes ARF6 Protein Ubiquitination.   DOI:  10.3390/ijms21249437 ;  PMID:  33322385
• MiR160 and its target genes ARF10, ARF16 and ARF17 modulate hypocotyl elongation in a light, BRZ, or PAC-dependent manner in Arabidopsis: miR160 promotes hypocotyl elongation.   DOI:  10.1016/j.plantsci.2020.110686 ;  PMID:  33487334
• Auxin contributes to jasmonate-mediated regulation of abscisic acid signaling during seed germination in Arabidopsis.   DOI:  10.1093/plcell/koac362 ;  PMID:  36516412
• Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes.   DOI:  10.1126/science.290.5499.2105 ;  PMID:  11118137
• MicroRNA-directed regulation of Arabidopsis AUXIN RESPONSE FACTOR17 is essential for proper development and modulates expression of early auxin response genes.   DOI:  10.1105/tpc.105.031716 ;  PMID:  15829600
• Control of root cap formation by MicroRNA-targeted auxin response factors in Arabidopsis.   DOI:  10.1105/tpc.105.033076 ;  PMID:  16006581
• Repression of AUXIN RESPONSE FACTOR10 by microRNA160 is critical for seed germination and post-germination stages.   DOI:  10.1111/j.1365-313X.2007.03218.x ;  PMID:  17672844

Sequences: