Information report for AT2G28315
Gene Details
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Functional Descriptions
- GO:0005783 — located in — endoplasmic reticulum
- GO:0005464 — enables — UDP-xylose transmembrane transporter activity
- GO:0015790 — acts upstream of or within — UDP-xylose transmembrane transport
- GO:0015297 — enables — antiporter activity
- GO:0005886 — located in — plasma membrane
- GO:0005794 — located in — Golgi apparatus
- GO:1900030 — acts upstream of or within — regulation of pectin biosynthetic process
- GO:0005794 — is active in — Golgi apparatus
- SAIL_147_F11 — Decreased xyl and glucuronic acid in stems.
- SALK_086773C — Decreased xyl and glucuronoxylan content in stems.
- uxt1 uxt2 uxt3 — Delayed growth, darker leaf color, shorter stems, vessels severely collapsed, thin interfascicular fiber cells, reduced secondary cell walls, reduced cell wall. Reduced Xyl, XyG, xylan, lignin content, increased Ara content (leaf, stem, anther filament). Reduced length of xylan backbone, modified xylan structure (methylation of alpha-GlcA residues). Reduced silique development and seed production, reduced anther filament length, indehiscent anthers with little pollen produced.
Functional Keywords
Literature and News
- Molecular cloning of two Arabidopsis UDP-galactose transporters by complementation of a deficient Chinese hamster ovary cell line. DOI: 10.1093/glycob/cwh159 ; PMID: 15456736
- Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes. DOI: 10.1006/jmbi.2000.4315 ; PMID: 11152613
- Identification and Characterization of a Golgi-Localized UDP-Xylose Transporter Family from Arabidopsis. DOI: 10.1105/tpc.114.133827 ; PMID: 25804536
- Endogenous Arabidopsis messenger RNAs transported to distant tissues. DOI: 10.1038/nplants.2015.25 ; PMID: 27247031
- Three UDP-xylose transporters participate in xylan biosynthesis by conveying cytosolic UDP-xylose into the Golgi lumen in Arabidopsis. DOI: 10.1093/jxb/erx448 ; PMID: 29300997
Gene Resources
- UniProt: A0A1P8B170
- EMBL: CP002685
- AlphaFoldDB: A0A1P8B170
- EnsemblPlants: AT2G28315.2
- Gramene: AT2G28315.2
- Orthologous matrix: NSLYTIW
- ExpressionAtlas: AT2G28315
- InterPro: IPR004853, IPR050186
- PANTHER: PTHR11132
- SUPFAM: SSF103481
- OrthoDB: A0A1P8B170
- SWISS-MODEL: A0A1P8B170
Homologs
- Malus domestica MDP0000288192
- Oryza sativa OsUGT3, OsUGT2, OsUGT1, OsNST1;BC14, OsGPT;OsGPT1
Sequences
cDNA Sequence
- >AT2G28315.2
TTCACAATCCTTCTCTTTTTCTCACATCAATATATATCTCTCTTTCTCTCTCTTCATTTGATAGATTTGAAGATTTGAGAGGAGAGAGAGGAAGAAAAAATGGGAGAGATGAAGAGTATGCAAATGGGTGTGATTGGAGCATTGTTTCTATCAGTTGCATCTTCTGTCTCCATTGTCATTTGCAACAAAGCTTTGATGACCAATCTTGGTTTCCCTTTTGCAACAACACTTACTAGTTGGCATTTGATGGTAACATATTGCACACTTCATGTGGCATATAAACTAAACTTCTTTGAGAATAAACCAATAGACATGAGAACTGTTGTTCTCTTTGGCCTCCTCAATGGCATTTCCATTGGTCTCCTCAATCTCAGCCTCGGCTTTAATTCCATCGGCTTCTATCAAATGACCAAACTTGCTATCATACCATTCACTGTTCTTTTAGAAACCCTCTTCCTCAACAAGAAGTTCAGCCAGAAGATAAAATTCTCATTGTTTTTGCTGCTAGTTGGGGTTGGTATAGCATCAATCACAGATCTTCAGCTCAATTTTGTTGGCTCTGTTCTATCTCTCCTTGCCATTGCCACAACTTGCGTCGGCCAAATTCTAACAAACACTATCCAGAAGAGACTGAACGTGACATCAACACAACTCCTATACCAATCAGCCCCGTTCCAAGCTGCTATACTCTTCGTCTCGGGTCCTTTTGTCGACAAATACCTCACTAGCCTCAATGTTTTCTCCTTCCATTACTCTCCCATCGTCGTGGGGTTCATAACGTTGTCGTGTTTGATAGCGGTTTCGGTTAACTTCAGTACGTTTTTAGTGATTGGAAAGACATCTCCGGTGACATACCAAGTCTTGGGACATCTCAAAACGTGTTTGGTGCTCGCATTTGGTTACACTCTCCTTCACGATCCCTTCACTCCTCGTAATATCGCAGGAATACTCATCGCTGTCCTCGGGATGCTTCTCTACTCCTACTTCTGCTCAGTTGCTTCTAAATCCAAACAAGCCTCCTCCGATTCCACTTTTCTTGTACGTTAACCACACAAAAAGAAAAGATAGAAATAATGAGTGTTGAAAGTTTCTAAGTACTTTGGTTTTATTCCTTTTTTGACAGGGGAAAGATAGAGATACGACGCCGCTTTTGGGACAAGAAAATGAGAACCATCATGAAGCCAAGAAATTAGACAAGCATTCTCCAGTATGAAATAGTACAATAACTCTTTCTTTATGTTTCGACTCTATAATTGTGTCCCTTTTTTTTGTTCATTCATTGATAATGTTTTTGTAATTGAGAAAAAATTGAAATAGCCAATGGGCATTTTCTCTTCTTTTTTA - >AT2G28315.1
TTCACAATCCTTCTCTTTTTCTCACATCAATATATATCTCTCTTTCTCTCTCTTCATTTGATAGATTTGAAGATTTGAGAGGAGAGAGAGGAAGAAAAAATGGGAGAGATGAAGAGTATGCAAATGGGTGTGATTGGAGCATTGTTTCTATCAGTTGCATCTTCTGTCTCCATTGTCATTTGCAACAAAGCTTTGATGACCAATCTTGGTTTCCCTTTTGCAACAACACTTACTAGTTGGCATTTGATGGTAACATATTGCACACTTCATGTGGCATATAAACTAAACTTCTTTGAGAATAAACCAATAGACATGAGAACTGTTGTTCTCTTTGGCCTCCTCAATGGCATTTCCATTGGTCTCCTCAATCTCAGCCTCGGCTTTAATTCCATCGGCTTCTATCAAATGACCAAACTTGCTATCATACCATTCACTGTTCTTTTAGAAACCCTCTTCCTCAACAAGAAGTTCAGCCAGAAGATAAAATTCTCATTGTTTTTGCTGCTAGTTGGGGTTGGTATAGCATCAATCACAGATCTTCAGCTCAATTTTGTTGGCTCTGTTCTATCTCTCCTTGCCATTGCCACAACTTGCGTCGGCCAAATTCTAACAAACACTATCCAGAAGAGACTGAACGTGACATCAACACAACTCCTATACCAATCAGCCCCGTTCCAAGCTGCTATACTCTTCGTCTCGGGTCCTTTTGTCGACAAATACCTCACTAGCCTCAATGTTTTCTCCTTCCATTACTCTCCCATCGTCGTGGGGTTCATAACGTTGTCGTGTTTGATAGCGGTTTCGGTTAACTTCAGTACGTTTTTAGTGATTGGAAAGACATCTCCGGTGACATACCAAGTCTTGGGACATCTCAAAACGTGTTTGGTGCTCGCATTTGGTTACACTCTCCTTCACGATCCCTTCACTCCTCGTAATATCGCAGGAATACTCATCGCTGTCCTCGGGATGCTTCTCTACTCCTACTTCTGCTCAGTTGCTTCTAAATCCAAACAAGCCTCCTCCGATTCCACTTTTCTTGTACGTTAACCACACAAAAAGAAAAGATAGAAATAATGAGTGTTGAAAGTTTCTAAGTACTTTGGTTTTATTCCTTTTTTGACAGGGGAAAGATAGAGATACGACGCCGCTTTTGGGACAAGAAAATGAGAACCATCATGAAGCCAAGAAATTAGACAAGCATTCTCCAGTATGAAATAGTACAATAACTCTTTCTTTATGTTTCGACTCTATAATTGTGTCCCTTTTTTTTGTTCATTCATTGATAATGTTTTTGTAATTGAGAAAAAATTGAAATAGCCAATGGGCATTTTCTCTTCTTTTTTA
CDS Sequence
- >AT2G28315.2
ATGGGAGAGATGAAGAGTATGCAAATGGGTGTGATTGGAGCATTGTTTCTATCAGTTGCATCTTCTGTCTCCATTGTCATTTGCAACAAAGCTTTGATGACCAATCTTGGTTTCCCTTTTGCAACAACACTTACTAGTTGGCATTTGATGGTAACATATTGCACACTTCATGTGGCATATAAACTAAACTTCTTTGAGAATAAACCAATAGACATGAGAACTGTTGTTCTCTTTGGCCTCCTCAATGGCATTTCCATTGGTCTCCTCAATCTCAGCCTCGGCTTTAATTCCATCGGCTTCTATCAAATGACCAAACTTGCTATCATACCATTCACTGTTCTTTTAGAAACCCTCTTCCTCAACAAGAAGTTCAGCCAGAAGATAAAATTCTCATTGTTTTTGCTGCTAGTTGGGGTTGGTATAGCATCAATCACAGATCTTCAGCTCAATTTTGTTGGCTCTGTTCTATCTCTCCTTGCCATTGCCACAACTTGCGTCGGCCAAATTCTAACAAACACTATCCAGAAGAGACTGAACGTGACATCAACACAACTCCTATACCAATCAGCCCCGTTCCAAGCTGCTATACTCTTCGTCTCGGGTCCTTTTGTCGACAAATACCTCACTAGCCTCAATGTTTTCTCCTTCCATTACTCTCCCATCGTCGTGGGGTTCATAACGTTGTCGTGTTTGATAGCGGTTTCGGTTAACTTCAGTACGTTTTTAGTGATTGGAAAGACATCTCCGGTGACATACCAAGTCTTGGGACATCTCAAAACGTGTTTGGTGCTCGCATTTGGTTACACTCTCCTTCACGATCCCTTCACTCCTCGTAATATCGCAGGAATACTCATCGCTGTCCTCGGGATGCTTCTCTACTCCTACTTCTGCTCAGTTGCTTCTAAATCCAAACAAGCCTCCTCCGATTCCACTTTTCTTGTACGTTAA - >AT2G28315.1
ATGGGAGAGATGAAGAGTATGCAAATGGGTGTGATTGGAGCATTGTTTCTATCAGTTGCATCTTCTGTCTCCATTGTCATTTGCAACAAAGCTTTGATGACCAATCTTGGTTTCCCTTTTGCAACAACACTTACTAGTTGGCATTTGATGGTAACATATTGCACACTTCATGTGGCATATAAACTAAACTTCTTTGAGAATAAACCAATAGACATGAGAACTGTTGTTCTCTTTGGCCTCCTCAATGGCATTTCCATTGGTCTCCTCAATCTCAGCCTCGGCTTTAATTCCATCGGCTTCTATCAAATGACCAAACTTGCTATCATACCATTCACTGTTCTTTTAGAAACCCTCTTCCTCAACAAGAAGTTCAGCCAGAAGATAAAATTCTCATTGTTTTTGCTGCTAGTTGGGGTTGGTATAGCATCAATCACAGATCTTCAGCTCAATTTTGTTGGCTCTGTTCTATCTCTCCTTGCCATTGCCACAACTTGCGTCGGCCAAATTCTAACAAACACTATCCAGAAGAGACTGAACGTGACATCAACACAACTCCTATACCAATCAGCCCCGTTCCAAGCTGCTATACTCTTCGTCTCGGGTCCTTTTGTCGACAAATACCTCACTAGCCTCAATGTTTTCTCCTTCCATTACTCTCCCATCGTCGTGGGGTTCATAACGTTGTCGTGTTTGATAGCGGTTTCGGTTAACTTCAGTACGTTTTTAGTGATTGGAAAGACATCTCCGGTGACATACCAAGTCTTGGGACATCTCAAAACGTGTTTGGTGCTCGCATTTGGTTACACTCTCCTTCACGATCCCTTCACTCCTCGTAATATCGCAGGAATACTCATCGCTGTCCTCGGGATGCTTCTCTACTCCTACTTCTGCTCAGTTGCTTCTAAATCCAAACAAGCCTCCTCCGATTCCACTTTTCTTGTACGTTAA
Protein Sequence
- >AT2G28315.2
MGEMKSMQMGVIGALFLSVASSVSIVICNKALMTNLGFPFATTLTSWHLMVTYCTLHVAYKLNFFENKPIDMRTVVLFGLLNGISIGLLNLSLGFNSIGFYQMTKLAIIPFTVLLETLFLNKKFSQKIKFSLFLLLVGVGIASITDLQLNFVGSVLSLLAIATTCVGQILTNTIQKRLNVTSTQLLYQSAPFQAAILFVSGPFVDKYLTSLNVFSFHYSPIVVGFITLSCLIAVSVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYTLLHDPFTPRNIAGILIAVLGMLLYSYFCSVASKSKQASSDSTFLVR - >AT2G28315.1
MGEMKSMQMGVIGALFLSVASSVSIVICNKALMTNLGFPFATTLTSWHLMVTYCTLHVAYKLNFFENKPIDMRTVVLFGLLNGISIGLLNLSLGFNSIGFYQMTKLAIIPFTVLLETLFLNKKFSQKIKFSLFLLLVGVGIASITDLQLNFVGSVLSLLAIATTCVGQILTNTIQKRLNVTSTQLLYQSAPFQAAILFVSGPFVDKYLTSLNVFSFHYSPIVVGFITLSCLIAVSVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYTLLHDPFTPRNIAGILIAVLGMLLYSYFCSVASKSKQASSDSTFLVR