Information report for AT2G28120
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025195 — pollen tube cell — célula del tubo polínico (Spanish, exact), 花粉管細胞 (Japanese, exact)
Functional Keywords
- root , vascular leaf , stamen , sepal , flower , hypocotyl , leaf apex , collective leaf structure , pollen tube cell
Literature and News
- Sequence analysis of a 282-kilobase region surrounding the citrus Tristeza virus resistance gene (Ctv) locus in Poncirus trifoliata L. Raf. DOI: 10.1104/pp.011262 ; PMID: 12586873
- Unexpected protein families including cell defense components feature in the N-myristoylome of a higher eukaryote. DOI: 10.1074/jbc.M307321200 ; PMID: 12912986
- AtDGK2, a novel diacylglycerol kinase from Arabidopsis thaliana, phosphorylates 1-stearoyl-2-arachidonoyl-sn-glycerol and 1,2-dioleoyl-sn-glycerol and exhibits cold-inducible gene expression. DOI: 10.1074/jbc.M312187200 ; PMID: 14665624
- Genetic analysis of Arabidopsis GATA transcription factor gene family reveals a nitrate-inducible member important for chlorophyll synthesis and glucose sensitivity. DOI: 10.1111/j.1365-313X.2005.02568.x ; PMID: 16262716
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Distinct phylogenetic relationships and biochemical properties of Arabidopsis ovarian tumor-related deubiquitinases support their functional differentiation. DOI: 10.3389/fpls.2014.00084 ; PMID: 24659992
- Histone Deubiquitinase OTU1 Epigenetically Regulates DA1 and DA2, Which Control Arabidopsis Seed and Organ Size. DOI: 10.1016/j.isci.2020.100948 ; PMID: 32169818
- Unexpected protein families including cell defense components feature in the N-myristoylome of a higher eukaryote. DOI: 10.1074/jbc.M307321200 ; PMID: 12912986
- Large-scale analysis of in vivo phosphorylated membrane proteins by immobilized metal ion affinity chromatography and mass spectrometry. DOI: 10.1074/mcp.T300006-MCP200 ; PMID: 14506206
Gene Resources
- UniProt: Q9ZUV4
- EMBL: AC005851, AY057618, AY062537
- AlphaFoldDB: Q9ZUV4
- EnsemblPlants: AT2G28120.1
- Gramene: AT2G28120.1
- KEGG: ath:AT2G28120
- Orthologous matrix: MHQSGET
- ExpressionAtlas: AT2G28120
- InterPro: IPR010658, IPR036259, IPR056555
- PANTHER: PTHR21576, PTHR21576:SF29
- SUPFAM: SSF103473
- Gene3D: 1.20.1250.20
- Conserved Domain Database: cd17354
Homologs
- Brassica napus GSBRNA2T00090887001
- Daucus carota DCAR_007495
- Malus domestica MD04G1112900
- Pyrus bretschneideri Pbr029332.1
Sequences
cDNA Sequence
- >AT2G28120.1
GACAATCAGCTCTTTGTTCCATACTTTACAATTACATATAAACAAATTCCCCTATTCCTCTGATCTACTTTATAGCCCTGAGACTCTCTTTCTGTACTCTAATCATTTATCTAGCTCTCTCATTCTCTTATTCTGGATCAGCCAAGTTTCTCCATTTCTCAATCAAGAAAATCTTGAAATACTCAAATCTTTTCAAGATTCACTTTCAAAGATATCTTGATAATAGCCTCAAACTCTGGTTTCAAAGATGGGAAACGACGAGACCGTACGATTCTTGATTCACTTCTTCAATGGAAGATGGTTCATGGTGTTTGCTTCGTTTCTCATCATGGCTTGCGCTGGAGCCACCTACCTTTTTGGTACTTACTCTAAAGATATCAAATCTACACTTGGTTACGATCAGACCACGTTGAACCTCTTAGGTTTCTTTAAAGATCTTGGAGCAAACGTTGGTGTCTTGTCCGGTCTAATAGCTGAGGTCACACCGACTTGGTTCGTCCTCACCATTGGCTCGGCGATGAACTTCGTCGGTTACTTTATGATCTGGCTTACCGTAACCGGCAAAGTCGCTAAGCCAAAGGTTTGGCAAATGTGTCTTTATATTTGTATAGGAGCCAACTCGCAGAACTTTGCAAACACAGGAGCTTTGGTTACTTGTGTTAAGAATTTCCCTGAGAGCAGAGGAGTTATGCTTGGTTTGCTTAAGGGTTATGTTGGACTAAGTGGTGCAATCTTCACGCAGCTTTATTTTGCGATCTATGGACACGATTCCAAGTCTTTGATCTTGTTGATAGCATGGTTGCCTGCTGCGGTTTCTCTTGTGTTTGTGTATTTGATAAGAGAGAAGAAGGTTGTGAGGCAGAGGAATGAGCTTAGTGTGTTTTACCAATTCCTTTATATTTCTATATTCTTGGCTTTGTTCCTTATGGCAATGAACATTGCTGAGAAGCAAGTTCATTTCTCAAAAGCCGCTTATGCGGCTAGCGCTACGATATGTTGTGCTTTGCTTTTTGTGCCTCTTACGGTTTCCGTTAAGCAAGAGCTTGAAGTTTGGAACATGATGAAGTTACCTATCGAAGAGCCAAGCGAGGTCAAGGTTGAGAAACCAAAGAAAGAACTTGATCTTGATCAGGACAAAGCCGCCAAGGTGAATGGAGAAGAGAAGGAGACAAAATCTTGTTTCTCGACGGTGTTTTCTCCACCGCCAAGAGGGGAAGATTACACAATATTACAAGCATTGTTAAGCACCGACATGATAATCCTATTTGTCGCGACATTCTGTGGTTTAGGATCGAGCTTGACTGCCGTAGACAACCTCGGGCAGATAGGAGAATCCCTCGGCTACCCGAACCACACGGTTAGTTCCTTTGTGTCTCTAGTCAGCATATGGAACTACTTCGGTCGAGTGTTCTCTGGCTTTGTCTCGGAATACTTACTTGCAAAGTATAAATTACCCCGGCCGCTTATGATGACATTAGTCCTCTTATTGAGTTGTGCTGGCCACCTTCTCATCGCGTTCCCGGTACCAGGCTCGGTATATATAGCGTCAATTCTAATGGGATTCTCTTTCGGTGCACAACTTCCTCTGCTCTTTGCCATCATCTCAGAACTTTTTGGACTCAAGTACTACTCTACATTGTTCAATTGTGGACAACTTGCTAGCCCGCTCGGGTCTTACATCCTGAACGTTCGTGTCACGGGAATGCTTTACGATAAAGAGGCCTTGAAGCAACTAACGGCTCGAGGGCTAACCCGAAAAGACGTAAAGGACTTGACTTGCTTAGGAAGTCAATGTTATAAGCTGCCGTTTCTGATTTTGGCAGCAGTAACGTTTTTTGGAGCACTTGTATCTTTGGGGCTAGCGATAAGGACGAGAGAGTTTTACAAAGGTGATATTTACAAGAAGTTTAGGGAGAGTCCTGAGTCCGAGTCTGAATTAGTTCCTGATTCAAGAAAAGCTGTTGAATTTGTTGGTAAATAATTATCACACAAATTGTTTTTGTTACTTGAATCATAGTTGAATAAATTAATAGAAAAGAGCCGTTTAATTTCTTTAGTCTTTCTCAACTTGGTTTACTTTTCTTTAATTCAGGACAAGTTGTTGAAGCATTTCTTTTGTCGGTCAATCTAAAATACTAAAAAAGGGTAAT
CDS Sequence
- >AT2G28120.1
ATGGGAAACGACGAGACCGTACGATTCTTGATTCACTTCTTCAATGGAAGATGGTTCATGGTGTTTGCTTCGTTTCTCATCATGGCTTGCGCTGGAGCCACCTACCTTTTTGGTACTTACTCTAAAGATATCAAATCTACACTTGGTTACGATCAGACCACGTTGAACCTCTTAGGTTTCTTTAAAGATCTTGGAGCAAACGTTGGTGTCTTGTCCGGTCTAATAGCTGAGGTCACACCGACTTGGTTCGTCCTCACCATTGGCTCGGCGATGAACTTCGTCGGTTACTTTATGATCTGGCTTACCGTAACCGGCAAAGTCGCTAAGCCAAAGGTTTGGCAAATGTGTCTTTATATTTGTATAGGAGCCAACTCGCAGAACTTTGCAAACACAGGAGCTTTGGTTACTTGTGTTAAGAATTTCCCTGAGAGCAGAGGAGTTATGCTTGGTTTGCTTAAGGGTTATGTTGGACTAAGTGGTGCAATCTTCACGCAGCTTTATTTTGCGATCTATGGACACGATTCCAAGTCTTTGATCTTGTTGATAGCATGGTTGCCTGCTGCGGTTTCTCTTGTGTTTGTGTATTTGATAAGAGAGAAGAAGGTTGTGAGGCAGAGGAATGAGCTTAGTGTGTTTTACCAATTCCTTTATATTTCTATATTCTTGGCTTTGTTCCTTATGGCAATGAACATTGCTGAGAAGCAAGTTCATTTCTCAAAAGCCGCTTATGCGGCTAGCGCTACGATATGTTGTGCTTTGCTTTTTGTGCCTCTTACGGTTTCCGTTAAGCAAGAGCTTGAAGTTTGGAACATGATGAAGTTACCTATCGAAGAGCCAAGCGAGGTCAAGGTTGAGAAACCAAAGAAAGAACTTGATCTTGATCAGGACAAAGCCGCCAAGGTGAATGGAGAAGAGAAGGAGACAAAATCTTGTTTCTCGACGGTGTTTTCTCCACCGCCAAGAGGGGAAGATTACACAATATTACAAGCATTGTTAAGCACCGACATGATAATCCTATTTGTCGCGACATTCTGTGGTTTAGGATCGAGCTTGACTGCCGTAGACAACCTCGGGCAGATAGGAGAATCCCTCGGCTACCCGAACCACACGGTTAGTTCCTTTGTGTCTCTAGTCAGCATATGGAACTACTTCGGTCGAGTGTTCTCTGGCTTTGTCTCGGAATACTTACTTGCAAAGTATAAATTACCCCGGCCGCTTATGATGACATTAGTCCTCTTATTGAGTTGTGCTGGCCACCTTCTCATCGCGTTCCCGGTACCAGGCTCGGTATATATAGCGTCAATTCTAATGGGATTCTCTTTCGGTGCACAACTTCCTCTGCTCTTTGCCATCATCTCAGAACTTTTTGGACTCAAGTACTACTCTACATTGTTCAATTGTGGACAACTTGCTAGCCCGCTCGGGTCTTACATCCTGAACGTTCGTGTCACGGGAATGCTTTACGATAAAGAGGCCTTGAAGCAACTAACGGCTCGAGGGCTAACCCGAAAAGACGTAAAGGACTTGACTTGCTTAGGAAGTCAATGTTATAAGCTGCCGTTTCTGATTTTGGCAGCAGTAACGTTTTTTGGAGCACTTGTATCTTTGGGGCTAGCGATAAGGACGAGAGAGTTTTACAAAGGTGATATTTACAAGAAGTTTAGGGAGAGTCCTGAGTCCGAGTCTGAATTAGTTCCTGATTCAAGAAAAGCTGTTGAATTTGTTGGTAAATAA
Protein Sequence
- >AT2G28120.1
MGNDETVRFLIHFFNGRWFMVFASFLIMACAGATYLFGTYSKDIKSTLGYDQTTLNLLGFFKDLGANVGVLSGLIAEVTPTWFVLTIGSAMNFVGYFMIWLTVTGKVAKPKVWQMCLYICIGANSQNFANTGALVTCVKNFPESRGVMLGLLKGYVGLSGAIFTQLYFAIYGHDSKSLILLIAWLPAAVSLVFVYLIREKKVVRQRNELSVFYQFLYISIFLALFLMAMNIAEKQVHFSKAAYAASATICCALLFVPLTVSVKQELEVWNMMKLPIEEPSEVKVEKPKKELDLDQDKAAKVNGEEKETKSCFSTVFSPPPRGEDYTILQALLSTDMIILFVATFCGLGSSLTAVDNLGQIGESLGYPNHTVSSFVSLVSIWNYFGRVFSGFVSEYLLAKYKLPRPLMMTLVLLLSCAGHLLIAFPVPGSVYIASILMGFSFGAQLPLLFAIISELFGLKYYSTLFNCGQLASPLGSYILNVRVTGMLYDKEALKQLTARGLTRKDVKDLTCLGSQCYKLPFLILAAVTFFGALVSLGLAIRTREFYKGDIYKKFRESPESESELVPDSRKAVEFVGK