Information report for AT2G28060
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
Functional Keywords
Literature and News
- Detection of in vivo protein interactions between Snf1-related kinase subunits with intron-tagged epitope-labelling in plants cells. DOI: 10.1093/nar/29.17.3685 ; PMID: 11522840
- Computational prediction of miRNAs in Arabidopsis thaliana. DOI: 10.1101/gr.2908205 ; PMID: 15632092
- Beta-subunits of the SnRK1 complexes share a common ancestral function together with expression and function specificities; physical interaction with nitrate reductase specifically occurs via AKINbeta1-subunit. DOI: 10.1104/pp.108.123026 ; PMID: 18768910
- The hybrid four-CBS-domain KINβγ subunit functions as the canonical γ subunit of the plant energy sensor SnRK1. DOI: 10.1111/tpj.12192 ; PMID: 23551663
- SnRK1 from Arabidopsis thaliana is an atypical AMPK. DOI: 10.1111/tpj.12813 ; PMID: 25736509
- A role for the carbohydrate-binding module (CBM) in regulatory SnRK1 subunits: the effect of maltose on SnRK1 activity. DOI: 10.1111/tpj.14026 ; PMID: 30003611
Gene Resources
- UniProt: A0A178VXP7
- EMBL: CACRSJ010000105, CACSHJ010000088, LR881467
- AlphaFoldDB: A0A178VXP7
- EnsemblPlants: AT2G28060.1, AT2G28060.2, AT2G28060.3
- Gramene: AT2G28060.1, AT2G28060.2, AT2G28060.3
- KEGG: ath:AT2G28060
- Orthologous matrix: NNVYPGH
- ExpressionAtlas: AT2G28060
- InterPro: IPR006828, IPR037256, IPR043554
- PANTHER: PTHR46316, PTHR46316:SF5
- SUPFAM: SSF160219
- Gene3D: 6.20.250.60
- OrthoDB: A0A178VXP7
- SWISS-MODEL: A0A178VXP7
Sequences
cDNA Sequence
- >AT2G28060.1
AATGAGTAAAATAGTTTCCATAAGAAGAAAAAAAATGTTTTCTGAGGAAAGAAAATGTTTTCGAAGGACAGCAAAGTTTAAGCCAATAAGCAAAACAAAAGCTGATGCTTGTCGCGACTGTGTTCGTCAAGAATCTCCAGGACGAACCCAATCTTCTCTCTCGAAGCTGTCTAAAATTAATCAATCAATCATTGAGCTAATCATATTCTAGGTTTTTGTTTTAAGGATTTGTGTAGACTTTCATTGCTGCTACGTTTTTGAAAGGGTAATTTGAAGGGCTTAGCTTCCCAAAGGCACTAGGTGGCAATCTTATCCAAGATGAACAGTCAAAATCCTGATGATCATGAGGACACAACGGTTGTGGGATTTGAAGTACCTGTATCACCGGTTTCAAGTTACAACAATGTGTATTCCTCAACCGAAGATGAGACAAGAGATCCTCCAGCAGTACCGCCACACCTTCAACACTCTCTATTAGGCAATCAGGGTAGCATGGAACTGGCTTATGCGCCACAGAATGTTGTCCTGAACCACCTCTATATCGAGAACCGAGACGCCCCAAGATCTGTTGTAGCACTCGGTTTCTCGCATCGGTTCAGGACTAAGTTTGTCACTGTGGTGATATACAAGCCTGTCCAAAGAAGAGGGAGCGCCAATGTTTGAATAATGATACCTCTTTTTAAGTAGTGTTGGGAATTTGCTTCTTTATGGATTGAATTTGGTATACAAAACCATCTGGTCCGTACTGAATTTTATTCTTCTCTTACAGATTCGATTTAGACGGTTTCTAGGTACATTCGATTGAAATCATCTTCTTGTTCGGAGTTTATATAAAATCTCCATGCATTTTTATTTTTTAGGCCCAAAAAAGCTGATAGACGTGGGCATTGTTTGTTTGTAATAACTCCCTTAGATTGGGTTTAGTTAAACGAGCCCAAATATCGCTAATGAAGTTCTTTACTTGCT - >AT2G28060.3
AATGAGTAAAATAGTTTCCATAAGAAGAAAAAAAATGTTTTCTGAGGAAAGAAAATGTTTTCGAAGGACAGCAAAGTTTAAGCCAATAAGCAAAACAAAAGCTGATGCTTGTCGCGACTGTGTTCGTCAAGAATCTCCAGGACGAACCCAATCTTCTCTCTCGAAGCTGTCTAAAATTAATCAATCAATCATTGAGCTAATCATATTCTAGGTTTTTGTTTTAAGGATTTGTGTAGACTTTCATTGCTGCTACGTTTTTGAAAGGGTAATTTGAAGGGCTTAGCTTCCCAAAGGCACTAGGTGGCAATCTTATCCAAGATGAACAGTCAAAATCCTGATGATCATGAGGACACAACGGTTGTGGGATTTGAAGTACCTGTATCACCGGTTTCAAGTTACAACAATGTGTATTCCTCAACCGAAGATGAGACAAGAGATCCTCCAGCAGTACCGCCACACCTTCAACACTCTCTATTAGGCAATCAGGGTAGCATGGAACTGGCTTATGCGCCACAGAATGTTGTCCTGAACCACCTCTATATCGAGAACCGAGACGCCCCAAGATCTGTTGTAGCACTCGGTTTCTCGCATCGGTTCAGGACTAAGTTTGTCACTGTGGTGATATACAAGCCTGTCCAAAGAAGAGGGAGCGCCAATGTTTGAATAATGATACCTCTTTTTAAGTAGTGTTGGGAATTTGCTTCTTTATGGATTGAATTTGGTATACAAAACCATCTGGTCCGTACTGAATTTTATTCTTCTCTTACAGATTCGATTTAGACGGTTTCTAGGTACATTCGATTGAAATCATCTTCTTGTTCGGAGTTTATATAAAATCTCCATGCATTTTTATTTTTTAGGCCCAAAAAAGCTGATAGACGTGGGCATTGTTTGTTTGTAATAACTCCCTTAGATTGGGTTTAGTTAAACGAGCCCAAATATCGCTAATGAAGTTCTTTACTTGCT - >AT2G28060.4
AATGAGTAAAATAGTTTCCATAAGAAGAAAAAAAATGTTTTCTGAGGAAAGAAAATGTTTTCGAAGGACAGCAAAGTTTAAGCCAATAAGCAAAACAAAAGCTGATGCTTGTCGCGACTGTGTTCGTCAAGAATCTCCAGGACGAACCCAATCTTCTCTCTCGAAGCTGTCTAAAATTAATCAATCAATCATTGAGCTAATCATATTCTAGGTTTTTGTTTTAAGGATTTGTGTAGACTTTCATTGCTGCTACGTTTTTGAAAGGGTAATTTGAAGGGCTTAGCTTCCCAAAGGCACTAGGTGGCAATCTTATCCAAGATGAACAGTCAAAATCCTGATGATCATGAGGACACAACGGTTGTGGGATTTGAAGTACCTGTATCACCGGTTTCAAGTTACAACAATGTGTATTCCTCAACCGAAGATGAGACAAGAGATCCTCCAGCAGTACCGCCACACCTTCAACACTCTCTATTAGGCAATCAGGGTAGCATGGAACTGGCTTATGCGCCACAGAATGTTGTCCTGAACCACCTCTATATCGAGAACCGAGACGCCCCAAGATCTGTTGTAGCACTCGGTTTCTCGCATCGGTTCAGGACTAAGTTTGTCACTGTGGTGATATACAAGCCTGTCCAAAGAAGAGGGAGCGCCAATGTTTGAATAATGATACCTCTTTTTAAGTAGTGTTGGGAATTTGCTTCTTTATGGATTGAATTTGGTATACAAAACCATCTGGTCCGTACTGAATTTTATTCTTCTCTTACAGATTCGATTTAGACGGTTTCTAGGTACATTCGATTGAAATCATCTTCTTGTTCGGAGTTTATATAAAATCTCCATGCATTTTTATTTTTTAGGCCCAAAAAAGCTGATAGACGTGGGCATTGTTTGTTTGTAATAACTCCCTTAGATTGGGTTTAGTTAAACGAGCCCAAATATCGCTAATGAAGTTCTTTACTTGCT - >AT2G28060.2
AATGAGTAAAATAGTTTCCATAAGAAGAAAAAAAATGTTTTCTGAGGAAAGAAAATGTTTTCGAAGGACAGCAAAGTTTAAGCCAATAAGCAAAACAAAAGCTGATGCTTGTCGCGACTGTGTTCGTCAAGAATCTCCAGGACGAACCCAATCTTCTCTCTCGAAGCTGTCTAAAATTAATCAATCAATCATTGAGCTAATCATATTCTAGGTTTTTGTTTTAAGGATTTGTGTAGACTTTCATTGCTGCTACGTTTTTGAAAGGGTAATTTGAAGGGCTTAGCTTCCCAAAGGCACTAGGTGGCAATCTTATCCAAGATGAACAGTCAAAATCCTGATGATCATGAGGACACAACGGTTGTGGGATTTGAAGTACCTGTATCACCGGTTTCAAGTTACAACAATGTGTATTCCTCAACCGAAGATGAGACAAGAGATCCTCCAGCAGTACCGCCACACCTTCAACACTCTCTATTAGGCAATCAGGGTAGCATGGAACTGGCTTATGCGCCACAGAATGTTGTCCTGAACCACCTCTATATCGAGAACCGAGACGCCCCAAGATCTGTTGTAGCACTCGGTTTCTCGCATCGGTTCAGGACTAAGTTTGTCACTGTGGTGATATACAAGCCTGTCCAAAGAAGAGGGAGCGCCAATGTTTGAATAATGATACCTCTTTTTAAGTAGTGTTGGGAATTTGCTTCTTTATGGATTGAATTTGGTATACAAAACCATCTGGTCCGTACTGAATTTTATTCTTCTCTTACAGATTCGATTTAGACGGTTTCTAGGTACATTCGATTGAAATCATCTTCTTGTTCGGAGTTTATATAAAATCTCCATGCATTTTTATTTTTTAGGCCCAAAAAAGCTGATAGACGTGGGCATTGTTTGTTTGTAATAACTCCCTTAGATTGGGTTTAGTTAAACGAGCCCAAATATCGCTAATGAAGTTCTTTACTTGCT
CDS Sequence
- >AT2G28060.1
ATGAACAGTCAAAATCCTGATGATCATGAGGACACAACGGTTGTGGGATTTGAAGTACCTGTATCACCGGTTTCAAGTTACAACAATGTGTATTCCTCAACCGAAGATGAGACAAGAGATCCTCCAGCAGTACCGCCACACCTTCAACACTCTCTATTAGGCAATCAGGGTAGCATGGAACTGGCTTATGCGCCACAGAATGTTGTCCTGAACCACCTCTATATCGAGAACCGAGACGCCCCAAGATCTGTTGTAGCACTCGGTTTCTCGCATCGGTTCAGGACTAAGTTTGTCACTGTGGTGATATACAAGCCTGTCCAAAGAAGAGGGAGCGCCAATGTTTGA - >AT2G28060.3
ATGAACAGTCAAAATCCTGATGATCATGAGGACACAACGGTTGTGGGATTTGAAGTACCTGTATCACCGGTTTCAAGTTACAACAATGTGTATTCCTCAACCGAAGATGAGACAAGAGATCCTCCAGCAGTACCGCCACACCTTCAACACTCTCTATTAGGCAATCAGGGTAGCATGGAACTGGCTTATGCGCCACAGAATGTTGTCCTGAACCACCTCTATATCGAGAACCGAGACGCCCCAAGATCTGTTGTAGCACTCGGTTTCTCGCATCGGTTCAGGACTAAGTTTGTCACTGTGGTGATATACAAGCCTGTCCAAAGAAGAGGGAGCGCCAATGTTTGA - >AT2G28060.4
ATGAACAGTCAAAATCCTGATGATCATGAGGACACAACGGTTGTGGGATTTGAAGTACCTGTATCACCGGTTTCAAGTTACAACAATGTGTATTCCTCAACCGAAGATGAGACAAGAGATCCTCCAGCAGTACCGCCACACCTTCAACACTCTCTATTAGGCAATCAGGGTAGCATGGAACTGGCTTATGCGCCACAGAATGTTGTCCTGAACCACCTCTATATCGAGAACCGAGACGCCCCAAGATCTGTTGTAGCACTCGGTTTCTCGCATCGGTTCAGGACTAAGTTTGTCACTGTGGTGATATACAAGCCTGTCCAAAGAAGAGGGAGCGCCAATGTTTGA - >AT2G28060.2
ATGAACAGTCAAAATCCTGATGATCATGAGGACACAACGGTTGTGGGATTTGAAGTACCTGTATCACCGGTTTCAAGTTACAACAATGTGTATTCCTCAACCGAAGATGAGACAAGAGATCCTCCAGCAGTACCGCCACACCTTCAACACTCTCTATTAGGCAATCAGGGTAGCATGGAACTGGCTTATGCGCCACAGAATGTTGTCCTGAACCACCTCTATATCGAGAACCGAGACGCCCCAAGATCTGTTGTAGCACTCGGTTTCTCGCATCGGTTCAGGACTAAGTTTGTCACTGTGGTGATATACAAGCCTGTCCAAAGAAGAGGGAGCGCCAATGTTTGA
Protein Sequence
- >AT2G28060.1
MNSQNPDDHEDTTVVGFEVPVSPVSSYNNVYSSTEDETRDPPAVPPHLQHSLLGNQGSMELAYAPQNVVLNHLYIENRDAPRSVVALGFSHRFRTKFVTVVIYKPVQRRGSANV - >AT2G28060.3
MNSQNPDDHEDTTVVGFEVPVSPVSSYNNVYSSTEDETRDPPAVPPHLQHSLLGNQGSMELAYAPQNVVLNHLYIENRDAPRSVVALGFSHRFRTKFVTVVIYKPVQRRGSANV - >AT2G28060.4
MNSQNPDDHEDTTVVGFEVPVSPVSSYNNVYSSTEDETRDPPAVPPHLQHSLLGNQGSMELAYAPQNVVLNHLYIENRDAPRSVVALGFSHRFRTKFVTVVIYKPVQRRGSANV - >AT2G28060.2
MNSQNPDDHEDTTVVGFEVPVSPVSSYNNVYSSTEDETRDPPAVPPHLQHSLLGNQGSMELAYAPQNVVLNHLYIENRDAPRSVVALGFSHRFRTKFVTVVIYKPVQRRGSANV