Gene Details:
- Gene ID: AT2G27940
- Gene Symbol: ATL57
- Gene Name: Arabidopsis Tóxicos en Levadura 57
- Description: RING/U-box superfamily protein;(source:Araport11)
- TAIR Accession: locus:2057861
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
Gene Ontology:
- GO:0048316 — acts upstream of or within — seed development
- GO:0003674 — enables — molecular_function
- GO:0005575 — is active in — cellular_component
Function-related keywords:
Literature:
- Evaluation and classification of RING-finger domains encoded by the Arabidopsis genome. DOI: 10.1186/gb-2002-3-4-research0016 ; PMID: 11983057
- Genetic interactions of a putative Arabidopsis thaliana ubiquitin-ligase with components of the Saccharomyces cerevisiae ubiquitination machinery. DOI: 10.1007/s00294-006-0093-y ; PMID: 16897085
- Repertoire of plant RING E3 ubiquitin ligases revisited: New groups counting gene families and single genes. DOI: 10.1371/journal.pone.0203442 ; PMID: 30169501
Sequences:
cDNA Sequence
- >AT2G27940.1
GTTTCTTAATAGACTTCAGTGATGGAGACCAAGCACCTACGCAAGCTTCTCCAGCTCTACCAAGCTTGTGGTGGCGAACAAGAGCTCACAAAAACCGTCCAAAACGTCACATCATCACCATTGACTCCAACGCCACCACCACAGCCACCTTCGGCATTAGACTCCACTATGGCTCTCACCATCTTTATCCTCTTGGTTGCTCTCTTCTTCATGGGTTTCTTTTCAGTTTACTTCCGCCACTTCGCAGACAGTTCAAGTTCAACGGTTGATATTTCTTCCATGCCAAGAACAAGATCCTCTAGGATGTCTCCACGTCGCCTTTCCACATCCGTCGTCGTATCACGGCCGTATAGTTTCCGGAGGGGTCTTGATTCTCAGGCCGTTCGATCTCTGCCAGTGTACCGTTACACGAAAGCAGCGAAGCAGCGGAACGAAGATTGCGTTATCTGCTTGAGCGATTTCGAAGAAGGTGAAACAGTTAAAGTGATACCACATTGTGGTCACGTGTTCCACGTAGATTGCGTTGACACGTGGCTGAGCTCATACGTAACATGTCCCTTGTGCCGGAGTAACCAGCTGTTCTCGGATAAGGACTTGGGCATGCAAGAACCGCCTGATCAGGACTCGGCAGAAGAACATGACACGTGTGATGGTGTGGACACTTGTGTAAGGAGGTGTAGTAGCTGTTCAAGTTTGGGGCAGAGGACTGGATTGGAACGATCGCTGAGCCTCTGACATGTTCTTTTTTTTTTGTGTTGTTCTTAATCTTGATTTTGTCTTTGTATTATTGTTGTAATAAGGGAAGGGTATGAAATAATGACTTTGTAAAATGAGATTGAGTAGTAAATTTTGTTAGTGTT
CDS Sequence
- >AT2G27940.1
ATGGAGACCAAGCACCTACGCAAGCTTCTCCAGCTCTACCAAGCTTGTGGTGGCGAACAAGAGCTCACAAAAACCGTCCAAAACGTCACATCATCACCATTGACTCCAACGCCACCACCACAGCCACCTTCGGCATTAGACTCCACTATGGCTCTCACCATCTTTATCCTCTTGGTTGCTCTCTTCTTCATGGGTTTCTTTTCAGTTTACTTCCGCCACTTCGCAGACAGTTCAAGTTCAACGGTTGATATTTCTTCCATGCCAAGAACAAGATCCTCTAGGATGTCTCCACGTCGCCTTTCCACATCCGTCGTCGTATCACGGCCGTATAGTTTCCGGAGGGGTCTTGATTCTCAGGCCGTTCGATCTCTGCCAGTGTACCGTTACACGAAAGCAGCGAAGCAGCGGAACGAAGATTGCGTTATCTGCTTGAGCGATTTCGAAGAAGGTGAAACAGTTAAAGTGATACCACATTGTGGTCACGTGTTCCACGTAGATTGCGTTGACACGTGGCTGAGCTCATACGTAACATGTCCCTTGTGCCGGAGTAACCAGCTGTTCTCGGATAAGGACTTGGGCATGCAAGAACCGCCTGATCAGGACTCGGCAGAAGAACATGACACGTGTGATGGTGTGGACACTTGTGTAAGGAGGTGTAGTAGCTGTTCAAGTTTGGGGCAGAGGACTGGATTGGAACGATCGCTGAGCCTCTGA
Protein Sequence
- >AT2G27940.1
METKHLRKLLQLYQACGGEQELTKTVQNVTSSPLTPTPPPQPPSALDSTMALTIFILLVALFFMGFFSVYFRHFADSSSSTVDISSMPRTRSSRMSPRRLSTSVVVSRPYSFRRGLDSQAVRSLPVYRYTKAAKQRNEDCVICLSDFEEGETVKVIPHCGHVFHVDCVDTWLSSYVTCPLCRSNQLFSDKDLGMQEPPDQDSAEEHDTCDGVDTCVRRCSSCSSLGQRTGLERSLSL