Information report for AT2G27880
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
- GO:0009616 — acts upstream of or within — RNAi-mediated antiviral immune response
- GO:0003723 — enables — RNA binding
- GO:0005737 — is active in — cytoplasm
- GO:0098542 — acts upstream of or within — defense response to other organism
- GO:0004521 — enables — RNA endonuclease activity
- GO:0035194 — involved in — regulatory ncRNA-mediated post-transcriptional gene silencing
- GO:0005737 — located in — cytoplasm
- GO:0005829 — located in — cytosol
- GO:0009615 — acts upstream of or within — response to virus
Functional Keywords
Literature and News
- Fertile hypomorphic ARGONAUTE (ago1) mutants impaired in post-transcriptional gene silencing and virus resistance. DOI: 10.1105/tpc.010358 ; PMID: 11910010
- Cell cycle-regulated gene expression in Arabidopsis. DOI: 10.1074/jbc.M207570200 ; PMID: 12169696
- Cross-species microarray transcript profiling reveals high constitutive expression of metal homeostasis genes in shoots of the zinc hyperaccumulator Arabidopsis halleri. DOI: 10.1046/j.1365-313x.2003.01959.x ; PMID: 14690509
- Gene family analysis of the Arabidopsis pollen transcriptome reveals biological implications for cell growth, division control, and gene expression regulation. DOI: 10.1104/pp.104.057935 ; PMID: 15908605
- Arabidopsis endogenous small RNAs: highways and byways. DOI: 10.1016/j.tplants.2006.07.006 ; PMID: 16893673
- Common functions for diverse small RNAs of land plants. DOI: 10.1105/tpc.107.051706 ; PMID: 17601824
- The mechanism selecting the guide strand from small RNA duplexes is different among argonaute proteins. DOI: 10.1093/pcp/pcn043 ; PMID: 18344228
- Comparative transcriptomics of Arabidopsis sperm cells. DOI: 10.1104/pp.108.125229 ; PMID: 18667720
- Sorting of small RNAs into Arabidopsis argonaute complexes is directed by the 5' terminal nucleotide. DOI: 10.1016/j.cell.2008.02.034 ; PMID: 18342361
- MicroRNA activity in the Arabidopsis male germline. DOI: 10.1093/jxb/erq452 ; PMID: 21357774
- Somatic small RNA pathways promote the mitotic events of megagametogenesis during female reproductive development in Arabidopsis. DOI: 10.1242/dev.075390 ; PMID: 22399683
- Arabidopsis Argonaute MID domains use their nucleotide specificity loop to sort small RNAs. DOI: 10.1038/emboj.2012.204 ; PMID: 22850669
- Give It AGO: The Search for miRNA-Argonaute Sorting Signals in Arabidopsis thaliana Indicates a Relevance of Sequence Positions Other than the 5'-Position Alone. DOI: 10.3389/fpls.2012.00272 ; PMID: 23233858
- Comprehensive analysis of silencing mutants reveals complex regulation of the Arabidopsis methylome. DOI: 10.1016/j.cell.2012.10.054 ; PMID: 23313553
- Specific argonautes selectively bind small RNAs derived from potato spindle tuber viroid and attenuate viroid accumulation in vivo. DOI: 10.1128/JVI.01404-14 ; PMID: 25100851
- Is Argonaute 1 the only effective slicer of small RNA-mediated regulation of gene expression in plants? DOI: 10.1093/jxb/eru382 ; PMID: 25240066
- Roles and programming of Arabidopsis ARGONAUTE proteins during Turnip mosaic virus infection. DOI: 10.1371/journal.ppat.1004755 ; PMID: 25806948
- Functional and Genetic Analysis Identify a Role for Arabidopsis ARGONAUTE5 in Antiviral RNA Silencing. DOI: 10.1105/tpc.15.00264 ; PMID: 26023161
- Global identification and expression analysis of stress-responsive genes of the Argonaute family in apple. DOI: 10.1007/s00438-016-1236-6 ; PMID: 27475441
- A Primary Sequence Analysis of the ARGONAUTE Protein Family in Plants. DOI: 10.3389/fpls.2016.01347 ; PMID: 27635128
- Antiviral Defense Involves AGO4 in an Arabidopsis-Potexvirus Interaction. DOI: 10.1094/MPMI-09-16-0188-R ; PMID: 27762650
- ARGONAUTE5 Represses Age-Dependent Induction of Flowering through Physical and Functional Interaction with miR156 in Arabidopsis. DOI: 10.1093/pcp/pcaa022 ; PMID: 32105323
- Coupling of H3K27me3 recognition with transcriptional repression through the BAH-PHD-CPL2 complex in Arabidopsis. DOI: 10.1038/s41467-020-20089-0 ; PMID: 33277495
- The miRNome function transitions from regulating developmental genes to transposable elements during pollen maturation. DOI: 10.1093/plcell/koab280 ; PMID: 34755870
- Accumulation dynamics of ARGONAUTE proteins during meiosis in Arabidopsis. DOI: 10.1007/s00497-021-00434-z ; PMID: 34812935
- Origin, evolution and diversification of plant ARGONAUTE proteins. DOI: 10.1111/tpj.15615 ; PMID: 34845788
- A Jasmonic Acid-Related Mechanism Affects ARGONAUTE5 Expression and Antiviral Defense Against Potato Virus X in Arabidopsis thaliana. DOI: 10.1094/MPMI-11-22-0224-R ; PMID: 36853196
Gene Resources
Homologs
- Malus domestica MDP0000285251
- Musa acuminata GSMUA_Achr6P04510_001
- Oryza sativa MEL1, OsAGO1a, OsAGO1c, OsAGO1d, OsPNH1, AGO18;OsAGO18, OsAGO17, OsAGO7;shl4, OsAGO2
- Triticum aestivum TaAGO1b, TaAGO4, Traes_5AL_481F73E59
Sequences
cDNA Sequence
- >AT2G27880.1
TCTCACACAATACACACAAGTAACCAGTTTTCTCTCTCATTTTCTCAGTTTTTCTCTCTCTCCGTTTTTGAAAAGATTTTTGTTTCTACTTTGGGAAGCTTTCCGCTACAATGTCAAATCGTGGTGGTGGTGGTCACGGCGGCGCTAGTCGTGGTCGAGGAGGTGGACGAAGGTCTGACCAGAGACAAGATCAGTCTTCTGGTCAAGTTGCTTGGCCGGGTTTACAACAAAGCTACGGTGGTCGTGGTGGTTCTGTTTCCGCCGGTAGAGGTCGTGGAAACGTCGGAAGAGGTGAAAATACTGGAGATCTGACGGCGACGCAAGTTCCGGTTGCTTCTGCTGTTTCTGGCGGGAGAGGTCGTGGTAACATCGGAGATCCGACGTTTTCTGTTGCGTCTTCGTCTAAGACGGTGTCTGTTGCTTCTTCATCTAAAGAGGAAAGTAAGAATACGGAGGTTTCTGAGACCATGTCGAACCTTCAGATTACTTCGACGGAGACGAAACCTGAAATGACGTCACTTCCTCCGGCGTCATCTAAAGCGGTTACGTTTCCGGTACGGCCAGGACGTGGTACTTTGGGGAAGAAAGTCATGGTTCGTGCGAATCATTTCCTTGTTCAAGTTGCTGATCGTGATCTCTACCATTACGATGTTTCGATCAATCCTGAGGTTATATCAAAGACAGTGAACAGAAACGTGATGAAACTTCTGGTTAAGAATTATAAAGACTCTCACTTGGGAGGGAAGTCACCAGCGTATGATGGAAGGAAAAGCCTCTATACTGCTGGTCCATTACCTTTTGACTCGAAAGAGTTTGTTGTGAATCTGGCGGAGAAAAGAGCTGACGGTTCCTCTGGGAAGGACAGACCGTTTAAAGTTGCTGTAAAGAATGTGACAAGCACTGATCTTTATCAGTTGCAACAGTTCCTTGATCGTAAGCAAAGAGAGGCTCCATATGATACTATCCAAGTGCTTGATGTTGTTCTTAGGGATAAGCCCTCTAATGATTATGTCTCTGTTGGGAGGTCTTTTTTCCACACTAGTTTGGGAAAGGACGCAAGAGATGGTAGGGGTGAGCTTGGAGATGGTATTGAGTACTGGAGAGGTTATTTCCAAAGTCTAAGGCTGACTCAGATGGGTTTGTCTCTGAACATTGACGTTTCAGCAAGATCATTTTATGAACCGATTGTTGTCACTGACTTTATTAGCAAGTTTCTGAATATAAGGGACTTAAACAGGCCACTTAGAGACTCAGATCGACTTAAGGTGAAGAAAGTTTTGAGGACACTGAAAGTTAAGTTGCTTCACTGGAACGGCACAAAAAGTGCCAAAATTAGTGGGATTTCTAGTCTACCCATCAGGGAGCTAAGGTTCACTCTGGAGGACAAATCAGAGAAGACGGTTGTTCAATATTTTGCTGAAAAATATAATTATAGAGTGAAATACCAGGCTCTACCTGCTATTCAAACAGGGAGTGACACAAGACCCGTCTACCTACCAATGGAGCTCTGCCAAATTGACGAAGGGCAAAGATACACCAAAAGGCTCAATGAGAAGCAAGTGACTGCATTGCTAAAAGCTACCTGCCAACGACCCCCTGATAGAGAGAACTCGATCAAAAACTTGGTTGTGAAAAATAATTACAATGATGATCTGAGCAAGGAGTTTGGGATGTCAGTGACTACCCAACTAGCCTCGATTGAAGCTCGTGTACTTCCCCCACCGATGTTGAAGTACCATGACAGTGGTAAAGAGAAAATGGTAAATCCAAGGCTAGGACAGTGGAACATGATTGACAAGAAAATGGTTAATGGAGCAAAAGTCACTTCTTGGACTTGCGTAAGTTTCTCTACTCGGATTGACCGTGGTTTACCCCAAGAGTTCTGCAAACAGTTGATTGGGATGTGTGTCAGCAAAGGAATGGAATTTAAGCCTCAACCTGCTATTCCGTTCATCTCTTGTCCCCCTGAACATATTGAGGAAGCTCTTCTCGATATCCACAAAAGGGCACCTGGTCTCCAACTGTTGATTGTAATATTGCCTGATGTGACTGGATCATATGGAAAAATAAAAAGGATCTGTGAAACAGAATTGGGGATTGTCTCTCAGTGTTGCCAACCTAGACAAGTTAATAAACTCAACAAGCAGTACATGGAAAATGTTGCCTTGAAGATCAATGTCAAGACTGGGGGAAGGAACACTGTTCTTAATGATGCTATTAGAAGAAACATACCTCTTATTACTGATCGTCCAACCATCATCATGGGTGCTGATGTGACTCACCCACAGCCTGGAGAGGACTCAAGTCCTTCTATTGCTGCTGTTGTGGCCTCTATGGACTGGCCTGAGATAAACAAATACCGAGGATTGGTTTCTGCTCAAGCTCATAGGGAAGAAATTATTCAGGACCTGTATAAGCTGGTTCAGGATCCACAACGTGGGCTAGTCCACTCTGGTTTGATAAGGGAACATTTCATAGCATTCAGGAGAGCTACAGGCCAGATACCTCAAAGGATCATCTTCTATCGTGACGGAGTAAGCGAAGGGCAGTTTAGTCAGGTTCTGCTACATGAGATGACTGCTATCCGCAAGGCTTGTAACTCTCTCCAAGAGAATTATGTTCCTCGTGTTACTTTCGTGATTGTCCAGAAACGTCACCACACACGTTTGTTCCCTGAGCAACACGGGAATCGTGATATGACTGATAAGAGTGGCAATATTCAACCAGGTACTGTCGTGGACACTAAAATCTGTCACCCTAATGAATTCGACTTCTATTTGAACAGCCATGCTGGTATTCAGGGAACAAGCAGGCCGGCACATTACCATGTACTTCTCGATGAGAACGGTTTCACCGCTGATCAGTTGCAAATGCTCACAAACAACCTCTGCTACACGTATGCGAGGTGTACAAAATCTGTGTCAATTGTGCCACCAGCCTACTACGCTCACTTGGCTGCATTCCGTGCCCGCTACTACATGGAGAGTGAGATGTCTGATGGAGGTTCGAGCAGGTCCAGGAGCTCAACAACAGGTGTGGGTCAAGTCATTTCGCAGCTCCCAGCAATAAAAGATAACGTCAAGGAGGTTATGTTTTATTGCTAATGATTCACTTCTTCTCTTGCCAGTTTTAAAAGCCGTTAATAATTATGAAAACTATATTCGGCTCTCGGTTATCTCTTTTGGGTTTGGCTGTTAATATTTTGAAGGATCTGGCCAACTTTTGCGCCTTAGGACTTATGTTATGCGTTTTGGTTTCAGATGATGACTACTTTTATCGTTTGTGAAAAGACAAAGGGTTAATTATGATTTTTTTGGACGATGATTTGGCTCAGTTCTTTTTACTTATGGTATTTTGTGCTAATTTCTTGTTACAATTTAT
CDS Sequence
- >AT2G27880.1
ATGTCAAATCGTGGTGGTGGTGGTCACGGCGGCGCTAGTCGTGGTCGAGGAGGTGGACGAAGGTCTGACCAGAGACAAGATCAGTCTTCTGGTCAAGTTGCTTGGCCGGGTTTACAACAAAGCTACGGTGGTCGTGGTGGTTCTGTTTCCGCCGGTAGAGGTCGTGGAAACGTCGGAAGAGGTGAAAATACTGGAGATCTGACGGCGACGCAAGTTCCGGTTGCTTCTGCTGTTTCTGGCGGGAGAGGTCGTGGTAACATCGGAGATCCGACGTTTTCTGTTGCGTCTTCGTCTAAGACGGTGTCTGTTGCTTCTTCATCTAAAGAGGAAAGTAAGAATACGGAGGTTTCTGAGACCATGTCGAACCTTCAGATTACTTCGACGGAGACGAAACCTGAAATGACGTCACTTCCTCCGGCGTCATCTAAAGCGGTTACGTTTCCGGTACGGCCAGGACGTGGTACTTTGGGGAAGAAAGTCATGGTTCGTGCGAATCATTTCCTTGTTCAAGTTGCTGATCGTGATCTCTACCATTACGATGTTTCGATCAATCCTGAGGTTATATCAAAGACAGTGAACAGAAACGTGATGAAACTTCTGGTTAAGAATTATAAAGACTCTCACTTGGGAGGGAAGTCACCAGCGTATGATGGAAGGAAAAGCCTCTATACTGCTGGTCCATTACCTTTTGACTCGAAAGAGTTTGTTGTGAATCTGGCGGAGAAAAGAGCTGACGGTTCCTCTGGGAAGGACAGACCGTTTAAAGTTGCTGTAAAGAATGTGACAAGCACTGATCTTTATCAGTTGCAACAGTTCCTTGATCGTAAGCAAAGAGAGGCTCCATATGATACTATCCAAGTGCTTGATGTTGTTCTTAGGGATAAGCCCTCTAATGATTATGTCTCTGTTGGGAGGTCTTTTTTCCACACTAGTTTGGGAAAGGACGCAAGAGATGGTAGGGGTGAGCTTGGAGATGGTATTGAGTACTGGAGAGGTTATTTCCAAAGTCTAAGGCTGACTCAGATGGGTTTGTCTCTGAACATTGACGTTTCAGCAAGATCATTTTATGAACCGATTGTTGTCACTGACTTTATTAGCAAGTTTCTGAATATAAGGGACTTAAACAGGCCACTTAGAGACTCAGATCGACTTAAGGTGAAGAAAGTTTTGAGGACACTGAAAGTTAAGTTGCTTCACTGGAACGGCACAAAAAGTGCCAAAATTAGTGGGATTTCTAGTCTACCCATCAGGGAGCTAAGGTTCACTCTGGAGGACAAATCAGAGAAGACGGTTGTTCAATATTTTGCTGAAAAATATAATTATAGAGTGAAATACCAGGCTCTACCTGCTATTCAAACAGGGAGTGACACAAGACCCGTCTACCTACCAATGGAGCTCTGCCAAATTGACGAAGGGCAAAGATACACCAAAAGGCTCAATGAGAAGCAAGTGACTGCATTGCTAAAAGCTACCTGCCAACGACCCCCTGATAGAGAGAACTCGATCAAAAACTTGGTTGTGAAAAATAATTACAATGATGATCTGAGCAAGGAGTTTGGGATGTCAGTGACTACCCAACTAGCCTCGATTGAAGCTCGTGTACTTCCCCCACCGATGTTGAAGTACCATGACAGTGGTAAAGAGAAAATGGTAAATCCAAGGCTAGGACAGTGGAACATGATTGACAAGAAAATGGTTAATGGAGCAAAAGTCACTTCTTGGACTTGCGTAAGTTTCTCTACTCGGATTGACCGTGGTTTACCCCAAGAGTTCTGCAAACAGTTGATTGGGATGTGTGTCAGCAAAGGAATGGAATTTAAGCCTCAACCTGCTATTCCGTTCATCTCTTGTCCCCCTGAACATATTGAGGAAGCTCTTCTCGATATCCACAAAAGGGCACCTGGTCTCCAACTGTTGATTGTAATATTGCCTGATGTGACTGGATCATATGGAAAAATAAAAAGGATCTGTGAAACAGAATTGGGGATTGTCTCTCAGTGTTGCCAACCTAGACAAGTTAATAAACTCAACAAGCAGTACATGGAAAATGTTGCCTTGAAGATCAATGTCAAGACTGGGGGAAGGAACACTGTTCTTAATGATGCTATTAGAAGAAACATACCTCTTATTACTGATCGTCCAACCATCATCATGGGTGCTGATGTGACTCACCCACAGCCTGGAGAGGACTCAAGTCCTTCTATTGCTGCTGTTGTGGCCTCTATGGACTGGCCTGAGATAAACAAATACCGAGGATTGGTTTCTGCTCAAGCTCATAGGGAAGAAATTATTCAGGACCTGTATAAGCTGGTTCAGGATCCACAACGTGGGCTAGTCCACTCTGGTTTGATAAGGGAACATTTCATAGCATTCAGGAGAGCTACAGGCCAGATACCTCAAAGGATCATCTTCTATCGTGACGGAGTAAGCGAAGGGCAGTTTAGTCAGGTTCTGCTACATGAGATGACTGCTATCCGCAAGGCTTGTAACTCTCTCCAAGAGAATTATGTTCCTCGTGTTACTTTCGTGATTGTCCAGAAACGTCACCACACACGTTTGTTCCCTGAGCAACACGGGAATCGTGATATGACTGATAAGAGTGGCAATATTCAACCAGGTACTGTCGTGGACACTAAAATCTGTCACCCTAATGAATTCGACTTCTATTTGAACAGCCATGCTGGTATTCAGGGAACAAGCAGGCCGGCACATTACCATGTACTTCTCGATGAGAACGGTTTCACCGCTGATCAGTTGCAAATGCTCACAAACAACCTCTGCTACACGTATGCGAGGTGTACAAAATCTGTGTCAATTGTGCCACCAGCCTACTACGCTCACTTGGCTGCATTCCGTGCCCGCTACTACATGGAGAGTGAGATGTCTGATGGAGGTTCGAGCAGGTCCAGGAGCTCAACAACAGGTGTGGGTCAAGTCATTTCGCAGCTCCCAGCAATAAAAGATAACGTCAAGGAGGTTATGTTTTATTGCTAA
Protein Sequence
- >AT2G27880.1
MSNRGGGGHGGASRGRGGGRRSDQRQDQSSGQVAWPGLQQSYGGRGGSVSAGRGRGNVGRGENTGDLTATQVPVASAVSGGRGRGNIGDPTFSVASSSKTVSVASSSKEESKNTEVSETMSNLQITSTETKPEMTSLPPASSKAVTFPVRPGRGTLGKKVMVRANHFLVQVADRDLYHYDVSINPEVISKTVNRNVMKLLVKNYKDSHLGGKSPAYDGRKSLYTAGPLPFDSKEFVVNLAEKRADGSSGKDRPFKVAVKNVTSTDLYQLQQFLDRKQREAPYDTIQVLDVVLRDKPSNDYVSVGRSFFHTSLGKDARDGRGELGDGIEYWRGYFQSLRLTQMGLSLNIDVSARSFYEPIVVTDFISKFLNIRDLNRPLRDSDRLKVKKVLRTLKVKLLHWNGTKSAKISGISSLPIRELRFTLEDKSEKTVVQYFAEKYNYRVKYQALPAIQTGSDTRPVYLPMELCQIDEGQRYTKRLNEKQVTALLKATCQRPPDRENSIKNLVVKNNYNDDLSKEFGMSVTTQLASIEARVLPPPMLKYHDSGKEKMVNPRLGQWNMIDKKMVNGAKVTSWTCVSFSTRIDRGLPQEFCKQLIGMCVSKGMEFKPQPAIPFISCPPEHIEEALLDIHKRAPGLQLLIVILPDVTGSYGKIKRICETELGIVSQCCQPRQVNKLNKQYMENVALKINVKTGGRNTVLNDAIRRNIPLITDRPTIIMGADVTHPQPGEDSSPSIAAVVASMDWPEINKYRGLVSAQAHREEIIQDLYKLVQDPQRGLVHSGLIREHFIAFRRATGQIPQRIIFYRDGVSEGQFSQVLLHEMTAIRKACNSLQENYVPRVTFVIVQKRHHTRLFPEQHGNRDMTDKSGNIQPGTVVDTKICHPNEFDFYLNSHAGIQGTSRPAHYHVLLDENGFTADQLQMLTNNLCYTYARCTKSVSIVPPAYYAHLAAFRARYYMESEMSDGGSSRSRSSTTGVGQVISQLPAIKDNVKEVMFYC