Information report for AT2G27860
Gene Details
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Functional Descriptions
- PO:0000014 — rosette leaf — hoja en roseta (Spanish, exact), ロゼット葉 (Japanese, exact)
- PO:0009001 — fruit — frucht (exact, German), fruto (exact, Spanish), 果実 (exact, Japanese), coenocarp (narrow), syncarp (narrow), aggregate fruit (broad), compound fruit (broad), dehiscent fruit (broad), diaspore (broad), indehiscent fruit (broad), multiple fruit (broad), propagule (broad)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009047 — stem — caña (Spanish, exact), culm (exact), eje primario (Spanish, exact), primary axis (exact), primary stem (exact), tallo (Spanish, exact), tronco (Spanish, exact), 茎 (Japanese, exact), bole (narrow), cane (narrow), caudex (narrow), caudices (narrow), core (narrow), primocane (narrow), scape (narrow), stalk (narrow), trunk (narrow)
- PO:0025195 — pollen tube cell — célula del tubo polínico (Spanish, exact), 花粉管細胞 (Japanese, exact)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- GO:0009226 — acts upstream of or within — nucleotide-sugar biosynthetic process
- GO:0051287 — enables — NAD binding
- GO:0005829 — located in — cytosol
- GO:0005777 — located in — peroxisome
- GO:0010494 — located in — cytoplasmic stress granule
- GO:0048040 — enables — UDP-glucuronate decarboxylase activity
- GO:0005737 — located in — cytoplasm
- GO:0005794 — located in — Golgi apparatus
Functional Keywords
- rosette leaf , fruit , root , flower , stem , pollen tube cell , pollen
Literature and News
- The FHY3 and FAR1 genes encode transposase-related proteins involved in regulation of gene expression by the phytochrome A-signaling pathway. DOI: 10.1046/j.1365-313x.2003.01741.x ; PMID: 12753585
- The biosynthesis of the branched-chain sugar d-apiose in plants: functional cloning and characterization of a UDP-d-apiose/UDP-d-xylose synthase from Arabidopsis. DOI: 10.1046/j.1365-313x.2003.01841.x ; PMID: 12969423
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- Catalase deficiency drastically affects gene expression induced by high light in Arabidopsis thaliana. DOI: 10.1111/j.1365-313X.2004.02105.x ; PMID: 15200641
- Chloroplast research in the genomic age. DOI: 10.1016/s0168-9525(02)00003-3 ; PMID: 12493248
- Stress-induced protein S-glutathionylation in Arabidopsis. DOI: 10.1104/pp.104.058917 ; PMID: 16055689
- Proteomic analysis and extensive protein identification from dry, germinating Arabidopsis seeds and young seedlings. DOI: 10.5483/bmbrep.2005.38.6.650 ; PMID: 16336779
- The early dark-response in Arabidopsis thaliana revealed by cDNA microarray analysis. DOI: 10.1007/s11103-005-4211-x ; PMID: 16514558
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Systems analysis of seed filling in Arabidopsis: using general linear modeling to assess concordance of transcript and protein expression. DOI: 10.1104/pp.109.152413 ; PMID: 20118269
- Protein and metabolite composition of Arabidopsis stress granules. DOI: 10.1111/nph.15690 ; PMID: 30664249
- UDP-Api/UDP-Xyl synthases affect plant development by controlling the content of UDP-Api to regulate the RG-II-borate complex. DOI: 10.1111/tpj.14921 ; PMID: 32662159
- Analysis of protein complexes in Arabidopsis leaves using size exclusion chromatography and label-free protein correlation profiling. DOI: 10.1016/j.jprot.2017.06.004 ; PMID: 28627464
Gene Resources
Homologs
- Malus domestica MDP0000247737
- Oryza sativa UXS;OsUXS3, UXS-4
Sequences
cDNA Sequence
- >AT2G27860.1
CAGAGAGTGAGATTTCAAAATTCGACGAACCAATTTGCCTCCGTTCACATGCGATGCATCTTCTCTCTTAAATATCCACCGTCACCACTCTCTCTTCCTCTTTAGATTCTCTCTCTACAGAGAACTTGATTATTTTTTCTGATCTGAGAAAAAAAATGGCGAATGGAGCTAATAGAGTGGATCTCGACGGGAAACCGATACAACCGTTGACAATATGCATGATCGGCGCCGGAGGTTTCATCGGTTCACATCTCTGTGAAAAGCTCTTGACCGAGACGCCACATAAGGTGCTTGCGCTCGATGTTTACAACGATAAGATCAAACACTTGCTTGAGCCTGATACCGTTGAATGGAGTGGTCGGATCCAGTTTCATCGTATCAATATTAAGCATGATTCGAGACTTGAAGGTCTTGTTAAGATGGCGGATCTGATTATAAATCTTGCTGCGATCTGTACTCCAGCTGATTACAATACACGTCCTCTTGATACTATCTACAGCAATTTCATTGATGCGCTTCCAGTTGTGAAATACTGTTCTGAGAACAACAAGCGTCTCATTCACTTTTCTACCTGTGAAGTTTATGGAAAAACCATTGGAAGCTTTCTTCCTAAGGATCATCCTCTGCGTGATGATCCTGCTTTCTATGTTCTTAAAGAAGATATTTCCCCTTGCATATTTGGTTCAATTGAGAAGCAGAGGTGGTCATATGCGTGTGCAAAGCAACTGATTGAGAGACTTGTTTACGCTGAGGGTGCTGAGAATGGGCTTGAGTTCACCATCGTACGACCTTTTAACTGGATTGGACCTAGGATGGATTTCATCCCCGGCATTGATGGTCCTAGCGAAGGTGTCCCACGTGTCCTTGCCTGCTTTAGTAACAATCTTCTACGTCGTGAGCCTCTCAAGCTTGTAGATGGTGGAGAATCACAGAGAACTTTCGTCTACATCAATGATGCTATTGAAGCTGTCCTTTTGATGATTGAAAACCCAGAGAGGGCAAATGGGCACATCTTCAACGTAGGCAACCCGAACAACGAAGTTACAGTAAGACAGCTCGCTGAAATGATGACCGAGGTTTACGCAAAAGTGAGTGGAGAAGGAGCCATTGAGAGCCCAACGGTTGATGTTAGCTCCAAAGAGTTTTACGGGGAAGGTTATGATGACAGTGACAAGAGAATCCCAGACATGACCATCATTAACCGCCAACTCGGATGGAACCCGAAAACATCGCTATGGGACTTGCTCGAGTCGACCTTAACCTACCAGCACAGGACATACGCTGAAGCTGTGAAGAAGGCAACATCCAAACCAGTGGCTTCCTAAACTCTCCAAGACCCCAACGAAACTCGTTAAACACGCGTCATTTTGGCATTTTACTCTATTCGATTCTATTTTTTTCATCCCAGAGAAAACTTTTTTTCTTTTTTCTTTTTAAGAAAACGATATAATCACGGTGGTTCGTTCCAAGTATACCTTTTCGTTTGTAAGTTTTCTCTTTTTGTTTGGTTTGTTTGGCCATGTATGTCGGAGCTGTCAGAAAGCAAGAGGTTAATCGTTTGTAGCGAATGATAAATGTTCGAGTGTATATTTTAAAATGCTTCGTTTTACATGTGTACAAGTACAAGAACAAATGTAATTATCTTCTGTCAAGTAACACATTGTGTTTCGTTCAGAAAAAAAACAAGTGGACTACAGAGTATGAAAGAAAGTCTAGTAGTTTTGGAACGCTC
CDS Sequence
- >AT2G27860.1
ATGGCGAATGGAGCTAATAGAGTGGATCTCGACGGGAAACCGATACAACCGTTGACAATATGCATGATCGGCGCCGGAGGTTTCATCGGTTCACATCTCTGTGAAAAGCTCTTGACCGAGACGCCACATAAGGTGCTTGCGCTCGATGTTTACAACGATAAGATCAAACACTTGCTTGAGCCTGATACCGTTGAATGGAGTGGTCGGATCCAGTTTCATCGTATCAATATTAAGCATGATTCGAGACTTGAAGGTCTTGTTAAGATGGCGGATCTGATTATAAATCTTGCTGCGATCTGTACTCCAGCTGATTACAATACACGTCCTCTTGATACTATCTACAGCAATTTCATTGATGCGCTTCCAGTTGTGAAATACTGTTCTGAGAACAACAAGCGTCTCATTCACTTTTCTACCTGTGAAGTTTATGGAAAAACCATTGGAAGCTTTCTTCCTAAGGATCATCCTCTGCGTGATGATCCTGCTTTCTATGTTCTTAAAGAAGATATTTCCCCTTGCATATTTGGTTCAATTGAGAAGCAGAGGTGGTCATATGCGTGTGCAAAGCAACTGATTGAGAGACTTGTTTACGCTGAGGGTGCTGAGAATGGGCTTGAGTTCACCATCGTACGACCTTTTAACTGGATTGGACCTAGGATGGATTTCATCCCCGGCATTGATGGTCCTAGCGAAGGTGTCCCACGTGTCCTTGCCTGCTTTAGTAACAATCTTCTACGTCGTGAGCCTCTCAAGCTTGTAGATGGTGGAGAATCACAGAGAACTTTCGTCTACATCAATGATGCTATTGAAGCTGTCCTTTTGATGATTGAAAACCCAGAGAGGGCAAATGGGCACATCTTCAACGTAGGCAACCCGAACAACGAAGTTACAGTAAGACAGCTCGCTGAAATGATGACCGAGGTTTACGCAAAAGTGAGTGGAGAAGGAGCCATTGAGAGCCCAACGGTTGATGTTAGCTCCAAAGAGTTTTACGGGGAAGGTTATGATGACAGTGACAAGAGAATCCCAGACATGACCATCATTAACCGCCAACTCGGATGGAACCCGAAAACATCGCTATGGGACTTGCTCGAGTCGACCTTAACCTACCAGCACAGGACATACGCTGAAGCTGTGAAGAAGGCAACATCCAAACCAGTGGCTTCCTAA
Protein Sequence
- >AT2G27860.1
MANGANRVDLDGKPIQPLTICMIGAGGFIGSHLCEKLLTETPHKVLALDVYNDKIKHLLEPDTVEWSGRIQFHRINIKHDSRLEGLVKMADLIINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDHPLRDDPAFYVLKEDISPCIFGSIEKQRWSYACAKQLIERLVYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRREPLKLVDGGESQRTFVYINDAIEAVLLMIENPERANGHIFNVGNPNNEVTVRQLAEMMTEVYAKVSGEGAIESPTVDVSSKEFYGEGYDDSDKRIPDMTIINRQLGWNPKTSLWDLLESTLTYQHRTYAEAVKKATSKPVAS