AT2G27840

Gene Details

Gene ID: AT2G27840
Gene Symbol: HD2D, HDA13, HDT04, HDT4
Gene Name: histone deacetylase 2D, HISTONE DEACETYLASE 13
Description: histone deacetylase-related / HD-like protein;(source:Araport11)
TAIR Accession: locus:2041990
Genome: Araport11_genome_release
Species: Arabidopsis thaliana

Functional Descriptions

PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
PO:0005052 — plant callus — callo (Spanish, exact), portion of plant callus tissue (exact), 植物カルス (Japanese, exact), callus (broad)

GO:0005515 — enables — protein binding
GO:0005634 — located in — nucleus
GO:0030422 — acts upstream of or within — siRNA processing
GO:0004407 — enables — histone deacetylase activity
GO:0010162 — acts upstream of or within — seed dormancy process
GO:0005730 — located in — nucleolus

Functional Keywords

Literature and News

Gene Resources

Homologs

Sequences

cDNA Sequence

>AT2G27840.2
ATGTTCAATTTTAGGTATCGAGATTAAGCCAGGGAAGCCATTTAAGGTGATACAAAAAGATGGATTCATGGTCCATGCCTCTCAGGTTACCCTTGGTGACGTTGAGAAGGTTAAAAAAGATGAGACTTTTGCCGTTTATGTGAAGATTGGTGATGATGAGAATGGGTTTATGATTGGAAATCTCTCACAGAAGTTTCCTCAATTTTCTATTGATCTCTACTTAGGGCACGAGTTTGAGATTTCTCACAACAGTACAAGCAGTGTCTATCTTATTGGTTACAGGACCTTTGATGCTTTTGACGAACTGGATGAGGAGATTGATTCTGATTCTGAGTTAGATGAATATATGGAACAACAAATTGCTGCTTTGCCTCAAAATGAGATCAATCCTGAAGAAGATGATGAATCCGACTCAGATGAGATGGGTTTGGACGAGGATGATGACTCTTCAGATGAAGAAGATGTAGAGGCTGAAGCACCTTTAAAGGTGGCTCCTCCGAGCAAAAAGATGCCAAATGGTGCATTTGAGATAGCTAAAGGTGGAAAGAAGAACAAGTCATCAGGAGGGAAGAAGAGATGCCCATTCCCTTGTGGTCCCTCTTGCAAAAAGTAGAAGATATTTGCACACCAAGTCACATTTTTCCAATAGAAATTTTTACTTGACTGTATTGGTGAATCGTTGAGTGACTTATGAGGCTTTTGGCATCTTAAAATTTTTGGATTATTATAATATATGTTATGTTGTCATTTTGGAGTGTTAATGGGTTTAAATGAAATATGATTTTTGCTCTT
>AT2G27840.4
ATGTTCAATTTTAGGTATCGAGATTAAGCCAGGGAAGCCATTTAAGGTGATACAAAAAGATGGATTCATGGTCCATGCCTCTCAGGTTACCCTTGGTGACGTTGAGAAGGTTAAAAAAGATGAGACTTTTGCCGTTTATGTGAAGATTGGTGATGATGAGAATGGGTTTATGATTGGAAATCTCTCACAGAAGTTTCCTCAATTTTCTATTGATCTCTACTTAGGGCACGAGTTTGAGATTTCTCACAACAGTACAAGCAGTGTCTATCTTATTGGTTACAGGACCTTTGATGCTTTTGACGAACTGGATGAGGAGATTGATTCTGATTCTGAGTTAGATGAATATATGGAACAACAAATTGCTGCTTTGCCTCAAAATGAGATCAATCCTGAAGAAGATGATGAATCCGACTCAGATGAGATGGGTTTGGACGAGGATGATGACTCTTCAGATGAAGAAGATGTAGAGGCTGAAGCACCTTTAAAGGTGGCTCCTCCGAGCAAAAAGATGCCAAATGGTGCATTTGAGATAGCTAAAGGTGGAAAGAAGAACAAGTCATCAGGAGGGAAGAAGAGATGCCCATTCCCTTGTGGTCCCTCTTGCAAAAAGTAGAAGATATTTGCACACCAAGTCACATTTTTCCAATAGAAATTTTTACTTGACTGTATTGGTGAATCGTTGAGTGACTTATGAGGCTTTTGGCATCTTAAAATTTTTGGATTATTATAATATATGTTATGTTGTCATTTTGGAGTGTTAATGGGTTTAAATGAAATATGATTTTTGCTCTT
>AT2G27840.1
ATGTTCAATTTTAGGTATCGAGATTAAGCCAGGGAAGCCATTTAAGGTGATACAAAAAGATGGATTCATGGTCCATGCCTCTCAGGTTACCCTTGGTGACGTTGAGAAGGTTAAAAAAGATGAGACTTTTGCCGTTTATGTGAAGATTGGTGATGATGAGAATGGGTTTATGATTGGAAATCTCTCACAGAAGTTTCCTCAATTTTCTATTGATCTCTACTTAGGGCACGAGTTTGAGATTTCTCACAACAGTACAAGCAGTGTCTATCTTATTGGTTACAGGACCTTTGATGCTTTTGACGAACTGGATGAGGAGATTGATTCTGATTCTGAGTTAGATGAATATATGGAACAACAAATTGCTGCTTTGCCTCAAAATGAGATCAATCCTGAAGAAGATGATGAATCCGACTCAGATGAGATGGGTTTGGACGAGGATGATGACTCTTCAGATGAAGAAGATGTAGAGGCTGAAGCACCTTTAAAGGTGGCTCCTCCGAGCAAAAAGATGCCAAATGGTGCATTTGAGATAGCTAAAGGTGGAAAGAAGAACAAGTCATCAGGAGGGAAGAAGAGATGCCCATTCCCTTGTGGTCCCTCTTGCAAAAAGTAGAAGATATTTGCACACCAAGTCACATTTTTCCAATAGAAATTTTTACTTGACTGTATTGGTGAATCGTTGAGTGACTTATGAGGCTTTTGGCATCTTAAAATTTTTGGATTATTATAATATATGTTATGTTGTCATTTTGGAGTGTTAATGGGTTTAAATGAAATATGATTTTTGCTCTT
>AT2G27840.3
ATGTTCAATTTTAGGTATCGAGATTAAGCCAGGGAAGCCATTTAAGGTGATACAAAAAGATGGATTCATGGTCCATGCCTCTCAGGTTACCCTTGGTGACGTTGAGAAGGTTAAAAAAGATGAGACTTTTGCCGTTTATGTGAAGATTGGTGATGATGAGAATGGGTTTATGATTGGAAATCTCTCACAGAAGTTTCCTCAATTTTCTATTGATCTCTACTTAGGGCACGAGTTTGAGATTTCTCACAACAGTACAAGCAGTGTCTATCTTATTGGTTACAGGACCTTTGATGCTTTTGACGAACTGGATGAGGAGATTGATTCTGATTCTGAGTTAGATGAATATATGGAACAACAAATTGCTGCTTTGCCTCAAAATGAGATCAATCCTGAAGAAGATGATGAATCCGACTCAGATGAGATGGGTTTGGACGAGGATGATGACTCTTCAGATGAAGAAGATGTAGAGGCTGAAGCACCTTTAAAGGTGGCTCCTCCGAGCAAAAAGATGCCAAATGGTGCATTTGAGATAGCTAAAGGTGGAAAGAAGAACAAGTCATCAGGAGGGAAGAAGAGATGCCCATTCCCTTGTGGTCCCTCTTGCAAAAAGTAGAAGATATTTGCACACCAAGTCACATTTTTCCAATAGAAATTTTTACTTGACTGTATTGGTGAATCGTTGAGTGACTTATGAGGCTTTTGGCATCTTAAAATTTTTGGATTATTATAATATATGTTATGTTGTCATTTTGGAGTGTTAATGGGTTTAAATGAAATATGATTTTTGCTCTT

CDS Sequence

>AT2G27840.2
ATGGTCCATGCCTCTCAGGTTACCCTTGGTGACGTTGAGAAGGTTAAAAAAGATGAGACTTTTGCCGTTTATGTGAAGATTGGTGATGATGAGAATGGGTTTATGATTGGAAATCTCTCACAGAAGTTTCCTCAATTTTCTATTGATCTCTACTTAGGGCACGAGTTTGAGATTTCTCACAACAGTACAAGCAGTGTCTATCTTATTGGTTACAGGACCTTTGATGCTTTTGACGAACTGGATGAGGAGATTGATTCTGATTCTGAGTTAGATGAATATATGGAACAACAAATTGCTGCTTTGCCTCAAAATGAGATCAATCCTGAAGAAGATGATGAATCCGACTCAGATGAGATGGGTTTGGACGAGGATGATGACTCTTCAGATGAAGAAGATGTAGAGGCTGAAGCACCTTTAAAGGTGGCTCCTCCGAGCAAAAAGATGCCAAATGGTGCATTTGAGATAGCTAAAGGTGGAAAGAAGAACAAGTCATCAGGAGGGAAGAAGAGATGCCCATTCCCTTGTGGTCCCTCTTGCAAAAAGTAG
>AT2G27840.4
ATGGTCCATGCCTCTCAGGTTACCCTTGGTGACGTTGAGAAGGTTAAAAAAGATGAGACTTTTGCCGTTTATGTGAAGATTGGTGATGATGAGAATGGGTTTATGATTGGAAATCTCTCACAGAAGTTTCCTCAATTTTCTATTGATCTCTACTTAGGGCACGAGTTTGAGATTTCTCACAACAGTACAAGCAGTGTCTATCTTATTGGTTACAGGACCTTTGATGCTTTTGACGAACTGGATGAGGAGATTGATTCTGATTCTGAGTTAGATGAATATATGGAACAACAAATTGCTGCTTTGCCTCAAAATGAGATCAATCCTGAAGAAGATGATGAATCCGACTCAGATGAGATGGGTTTGGACGAGGATGATGACTCTTCAGATGAAGAAGATGTAGAGGCTGAAGCACCTTTAAAGGTGGCTCCTCCGAGCAAAAAGATGCCAAATGGTGCATTTGAGATAGCTAAAGGTGGAAAGAAGAACAAGTCATCAGGAGGGAAGAAGAGATGCCCATTCCCTTGTGGTCCCTCTTGCAAAAAGTAG
>AT2G27840.1
ATGGTCCATGCCTCTCAGGTTACCCTTGGTGACGTTGAGAAGGTTAAAAAAGATGAGACTTTTGCCGTTTATGTGAAGATTGGTGATGATGAGAATGGGTTTATGATTGGAAATCTCTCACAGAAGTTTCCTCAATTTTCTATTGATCTCTACTTAGGGCACGAGTTTGAGATTTCTCACAACAGTACAAGCAGTGTCTATCTTATTGGTTACAGGACCTTTGATGCTTTTGACGAACTGGATGAGGAGATTGATTCTGATTCTGAGTTAGATGAATATATGGAACAACAAATTGCTGCTTTGCCTCAAAATGAGATCAATCCTGAAGAAGATGATGAATCCGACTCAGATGAGATGGGTTTGGACGAGGATGATGACTCTTCAGATGAAGAAGATGTAGAGGCTGAAGCACCTTTAAAGGTGGCTCCTCCGAGCAAAAAGATGCCAAATGGTGCATTTGAGATAGCTAAAGGTGGAAAGAAGAACAAGTCATCAGGAGGGAAGAAGAGATGCCCATTCCCTTGTGGTCCCTCTTGCAAAAAGTAG
>AT2G27840.3
ATGGTCCATGCCTCTCAGGTTACCCTTGGTGACGTTGAGAAGGTTAAAAAAGATGAGACTTTTGCCGTTTATGTGAAGATTGGTGATGATGAGAATGGGTTTATGATTGGAAATCTCTCACAGAAGTTTCCTCAATTTTCTATTGATCTCTACTTAGGGCACGAGTTTGAGATTTCTCACAACAGTACAAGCAGTGTCTATCTTATTGGTTACAGGACCTTTGATGCTTTTGACGAACTGGATGAGGAGATTGATTCTGATTCTGAGTTAGATGAATATATGGAACAACAAATTGCTGCTTTGCCTCAAAATGAGATCAATCCTGAAGAAGATGATGAATCCGACTCAGATGAGATGGGTTTGGACGAGGATGATGACTCTTCAGATGAAGAAGATGTAGAGGCTGAAGCACCTTTAAAGGTGGCTCCTCCGAGCAAAAAGATGCCAAATGGTGCATTTGAGATAGCTAAAGGTGGAAAGAAGAACAAGTCATCAGGAGGGAAGAAGAGATGCCCATTCCCTTGTGGTCCCTCTTGCAAAAAGTAG

Protein Sequence

>AT2G27840.2
MVHASQVTLGDVEKVKKDETFAVYVKIGDDENGFMIGNLSQKFPQFSIDLYLGHEFEISHNSTSSVYLIGYRTFDAFDELDEEIDSDSELDEYMEQQIAALPQNEINPEEDDESDSDEMGLDEDDDSSDEEDVEAEAPLKVAPPSKKMPNGAFEIAKGGKKNKSSGGKKRCPFPCGPSCKK
>AT2G27840.4
MVHASQVTLGDVEKVKKDETFAVYVKIGDDENGFMIGNLSQKFPQFSIDLYLGHEFEISHNSTSSVYLIGYRTFDAFDELDEEIDSDSELDEYMEQQIAALPQNEINPEEDDESDSDEMGLDEDDDSSDEEDVEAEAPLKVAPPSKKMPNGAFEIAKGGKKNKSSGGKKRCPFPCGPSCKK
>AT2G27840.1
MVHASQVTLGDVEKVKKDETFAVYVKIGDDENGFMIGNLSQKFPQFSIDLYLGHEFEISHNSTSSVYLIGYRTFDAFDELDEEIDSDSELDEYMEQQIAALPQNEINPEEDDESDSDEMGLDEDDDSSDEEDVEAEAPLKVAPPSKKMPNGAFEIAKGGKKNKSSGGKKRCPFPCGPSCKK
>AT2G27840.3
MVHASQVTLGDVEKVKKDETFAVYVKIGDDENGFMIGNLSQKFPQFSIDLYLGHEFEISHNSTSSVYLIGYRTFDAFDELDEEIDSDSELDEYMEQQIAALPQNEINPEEDDESDSDEMGLDEDDDSSDEEDVEAEAPLKVAPPSKKMPNGAFEIAKGGKKNKSSGGKKRCPFPCGPSCKK