Information report for AT2G27720
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
- GO:0002182 — involved in — cytoplasmic translational elongation
- GO:0005777 — located in — peroxisome
- GO:0022626 — located in — cytosolic ribosome
- GO:0022625 — part of — cytosolic large ribosomal subunit
- GO:0099503 — located in — secretory vesicle
- GO:0005737 — located in — cytoplasm
- GO:0005634 — located in — nucleus
- GO:0003729 — enables — mRNA binding
Functional Keywords
Literature and News
- The organization of cytoplasmic ribosomal protein genes in the Arabidopsis genome. DOI: 6834 ; PMID: 11598216
- Analysis of the Arabidopsis nuclear proteome and its response to cold stress. DOI: 10.1046/j.1365-313x.2003.01907.x ; PMID: 14617066
- The Arabidopsis root transcriptome by serial analysis of gene expression. Gene identification using the genome sequence. DOI: 10.1104/pp.103.030536 ; PMID: 14730065
- Proteomic characterization of evolutionarily conserved and variable proteins of Arabidopsis cytosolic ribosomes. DOI: 10.1104/pp.104.053637 ; PMID: 15734919
- High heterogeneity within the ribosomal proteins of the Arabidopsis thaliana 80S ribosome. DOI: 10.1007/s11103-005-0699-3 ; PMID: 15821981
- Phosphoproteomic identification of targets of the Arabidopsis sucrose nonfermenting-like kinase SnRK2.8 reveals a connection to metabolic processes. DOI: 10.1073/pnas.0610208104 ; PMID: 17404219
- Analysis of the Arabidopsis cytosolic ribosome proteome provides detailed insights into its components and their post-translational modification. DOI: 10.1074/mcp.M700052-MCP200 ; PMID: 17934214
- Site-specific phosphorylation profiling of Arabidopsis proteins by mass spectrometry and peptide chip analysis. DOI: 10.1021/pr8000173 ; PMID: 18433157
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Quantitative proteomics of a chloroplast SRP54 sorting mutant and its genetic interactions with CLPC1 in Arabidopsis. DOI: 10.1104/pp.108.124545 ; PMID: 18633119
- Differential phosphorylation of ribosomal proteins in Arabidopsis thaliana plants during day and night. DOI: 10.1371/journal.pone.0029307 ; PMID: 22195043
- Structural and functional characteristics of cGMP-dependent methionine oxidation in Arabidopsis thaliana proteins. DOI: 10.1186/1478-811X-11-1 ; PMID: 23289948
- Discovering the RNA-Binding Proteome of Plant Leaves with an Improved RNA Interactome Capture Method. DOI: 10.3390/biom10040661 ; PMID: 32344669
- Plant cytoplasmic ribosomal proteins: an update on classification, nomenclature, evolution and resources. DOI: 10.1111/tpj.15667 ; PMID: 35000252
- An updated nomenclature for plant ribosomal protein genes. DOI: 10.1093/plcell/koac333 ; PMID: 36423343
- Analysis of the Arabidopsis nuclear proteome and its response to cold stress. DOI: 10.1046/j.1365-313x.2003.01907.x ; PMID: 14617066
- Proteomic characterization of evolutionarily conserved and variable proteins of Arabidopsis cytosolic ribosomes. DOI: 10.1104/pp.104.053637 ; PMID: 15734919
- High heterogeneity within the ribosomal proteins of the Arabidopsis thaliana 80S ribosome. DOI: 10.1007/s11103-005-0699-3 ; PMID: 15821981
- Membrane proteomic analysis of Arabidopsis thaliana using alternative solubilization techniques. DOI: 10.1021/pr060525b ; PMID: 17432890
- Analysis of the Arabidopsis cytosolic ribosome proteome provides detailed insights into its components and their post-translational modification. DOI: 10.1074/mcp.M700052-MCP200 ; PMID: 17934214
- Site-specific phosphorylation profiling of Arabidopsis proteins by mass spectrometry and peptide chip analysis. DOI: 10.1021/pr8000173 ; PMID: 18433157
- Structural and functional characteristics of cGMP-dependent methionine oxidation in Arabidopsis thaliana proteins. DOI: 10.1186/1478-811X-11-1 ; PMID: 23289948
- Analysis of protein complexes in Arabidopsis leaves using size exclusion chromatography and label-free protein correlation profiling. DOI: 10.1016/j.jprot.2017.06.004 ; PMID: 28627464
Gene Resources
- UniProt: F4IGR5
- EMBL: CP002685
- AlphaFoldDB: F4IGR5
- EnsemblPlants: AT2G27720.3
- Gramene: AT2G27720.3
- ExpressionAtlas: AT2G27720
- InterPro: IPR027534, IPR038716, IPR044076
- PANTHER: PTHR21141, PTHR21141:SF114
- Gene3D: 1.10.10.1410
- Conserved Domain Database: cd05833
Sequences
cDNA Sequence
- >AT2G27720.3
ATGAAGGTTGTTGCTGCGTTTTTGCTTGCCGTCTTGAGCGGGAAAGCTTCCCCAACCACTGGCGATATCAAGGATATTCTTGGATCAGGCATTATGGTGTTGGTATTGGACTGTGTTGTTATAGTTGGTGCTGAGACAGAGGATTCTCAGATTGAGCTTTTGTTGAAGGAAGTGAAAGGGAAAGACTTGGCTGAGCTAATTGCTGCTGGAAGGGAGAAGTTAGCTTCAGTACCATCAGGAGGTGGTGGTGGTGTTGCGGTTGCTTCTGCTACATCTGGAGGTGGAGGAGGTGGTGGTGCTCCTGCTGCTGAGTCCAAGAAAGAAGAGAAGAAAGAAGAGAAAGAAGAATCCGATGATGACATGGGTTTCAGTTTGTTCGAGTAATGCGGTATACTTGGCATTTGGTTTTGCTGTACCCTTTCGAAATCTTTATGTCGTTGTTTAGTTTGTTGTATTCGACTATCTTCTTAGACTTTGCTGAAATTCTCAAGAGATTTTTTTACTCAAACATCAGTCCACTTGTGATTGGCATTTATATTTCAAACTATTGCCTTAGTTACATCTTCAATAGTCCACTTATGAACGATCTTTAGTAAATTCTCTTATTCACTCGCTTACTAAGAATTAAACCTAAAGAGAATACAGAAGAATTCCCTAGAG - >AT2G27720.1
ATGAAGGTTGTTGCTGCGTTTTTGCTTGCCGTCTTGAGCGGGAAAGCTTCCCCAACCACTGGCGATATCAAGGATATTCTTGGATCAGGCATTATGGTGTTGGTATTGGACTGTGTTGTTATAGTTGGTGCTGAGACAGAGGATTCTCAGATTGAGCTTTTGTTGAAGGAAGTGAAAGGGAAAGACTTGGCTGAGCTAATTGCTGCTGGAAGGGAGAAGTTAGCTTCAGTACCATCAGGAGGTGGTGGTGGTGTTGCGGTTGCTTCTGCTACATCTGGAGGTGGAGGAGGTGGTGGTGCTCCTGCTGCTGAGTCCAAGAAAGAAGAGAAGAAAGAAGAGAAAGAAGAATCCGATGATGACATGGGTTTCAGTTTGTTCGAGTAATGCGGTATACTTGGCATTTGGTTTTGCTGTACCCTTTCGAAATCTTTATGTCGTTGTTTAGTTTGTTGTATTCGACTATCTTCTTAGACTTTGCTGAAATTCTCAAGAGATTTTTTTACTCAAACATCAGTCCACTTGTGATTGGCATTTATATTTCAAACTATTGCCTTAGTTACATCTTCAATAGTCCACTTATGAACGATCTTTAGTAAATTCTCTTATTCACTCGCTTACTAAGAATTAAACCTAAAGAGAATACAGAAGAATTCCCTAGAG - >AT2G27720.4
ATGAAGGTTGTTGCTGCGTTTTTGCTTGCCGTCTTGAGCGGGAAAGCTTCCCCAACCACTGGCGATATCAAGGATATTCTTGGATCAGGCATTATGGTGTTGGTATTGGACTGTGTTGTTATAGTTGGTGCTGAGACAGAGGATTCTCAGATTGAGCTTTTGTTGAAGGAAGTGAAAGGGAAAGACTTGGCTGAGCTAATTGCTGCTGGAAGGGAGAAGTTAGCTTCAGTACCATCAGGAGGTGGTGGTGGTGTTGCGGTTGCTTCTGCTACATCTGGAGGTGGAGGAGGTGGTGGTGCTCCTGCTGCTGAGTCCAAGAAAGAAGAGAAGAAAGAAGAGAAAGAAGAATCCGATGATGACATGGGTTTCAGTTTGTTCGAGTAATGCGGTATACTTGGCATTTGGTTTTGCTGTACCCTTTCGAAATCTTTATGTCGTTGTTTAGTTTGTTGTATTCGACTATCTTCTTAGACTTTGCTGAAATTCTCAAGAGATTTTTTTACTCAAACATCAGTCCACTTGTGATTGGCATTTATATTTCAAACTATTGCCTTAGTTACATCTTCAATAGTCCACTTATGAACGATCTTTAGTAAATTCTCTTATTCACTCGCTTACTAAGAATTAAACCTAAAGAGAATACAGAAGAATTCCCTAGAG - >AT2G27720.2
ATGAAGGTTGTTGCTGCGTTTTTGCTTGCCGTCTTGAGCGGGAAAGCTTCCCCAACCACTGGCGATATCAAGGATATTCTTGGATCAGGCATTATGGTGTTGGTATTGGACTGTGTTGTTATAGTTGGTGCTGAGACAGAGGATTCTCAGATTGAGCTTTTGTTGAAGGAAGTGAAAGGGAAAGACTTGGCTGAGCTAATTGCTGCTGGAAGGGAGAAGTTAGCTTCAGTACCATCAGGAGGTGGTGGTGGTGTTGCGGTTGCTTCTGCTACATCTGGAGGTGGAGGAGGTGGTGGTGCTCCTGCTGCTGAGTCCAAGAAAGAAGAGAAGAAAGAAGAGAAAGAAGAATCCGATGATGACATGGGTTTCAGTTTGTTCGAGTAATGCGGTATACTTGGCATTTGGTTTTGCTGTACCCTTTCGAAATCTTTATGTCGTTGTTTAGTTTGTTGTATTCGACTATCTTCTTAGACTTTGCTGAAATTCTCAAGAGATTTTTTTACTCAAACATCAGTCCACTTGTGATTGGCATTTATATTTCAAACTATTGCCTTAGTTACATCTTCAATAGTCCACTTATGAACGATCTTTAGTAAATTCTCTTATTCACTCGCTTACTAAGAATTAAACCTAAAGAGAATACAGAAGAATTCCCTAGAG
CDS Sequence
- >AT2G27720.3
ATGAAGGTTGTTGCTGCGTTTTTGCTTGCCGTCTTGAGCGGGAAAGCTTCCCCAACCACTGGCGATATCAAGGATATTCTTGGATCAGGCATTATGGTGTTGGTATTGGACTGTGTTGTTATAGTTGGTGCTGAGACAGAGGATTCTCAGATTGAGCTTTTGTTGAAGGAAGTGAAAGGGAAAGACTTGGCTGAGCTAATTGCTGCTGGAAGGGAGAAGTTAGCTTCAGTACCATCAGGAGGTGGTGGTGGTGTTGCGGTTGCTTCTGCTACATCTGGAGGTGGAGGAGGTGGTGGTGCTCCTGCTGCTGAGTCCAAGAAAGAAGAGAAGAAAGAAGAGAAAGAAGAATCCGATGATGACATGGGTTTCAGTTTGTTCGAGTAA - >AT2G27720.1
ATGAAGGTTGTTGCTGCGTTTTTGCTTGCCGTCTTGAGCGGGAAAGCTTCCCCAACCACTGGCGATATCAAGGATATTCTTGGATCAGGCATTATGGTGTTGGTATTGGACTGTGTTGTTATAGTTGGTGCTGAGACAGAGGATTCTCAGATTGAGCTTTTGTTGAAGGAAGTGAAAGGGAAAGACTTGGCTGAGCTAATTGCTGCTGGAAGGGAGAAGTTAGCTTCAGTACCATCAGGAGGTGGTGGTGGTGTTGCGGTTGCTTCTGCTACATCTGGAGGTGGAGGAGGTGGTGGTGCTCCTGCTGCTGAGTCCAAGAAAGAAGAGAAGAAAGAAGAGAAAGAAGAATCCGATGATGACATGGGTTTCAGTTTGTTCGAGTAA - >AT2G27720.4
ATGAAGGTTGTTGCTGCGTTTTTGCTTGCCGTCTTGAGCGGGAAAGCTTCCCCAACCACTGGCGATATCAAGGATATTCTTGGATCAGGCATTATGGTGTTGGTATTGGACTGTGTTGTTATAGTTGGTGCTGAGACAGAGGATTCTCAGATTGAGCTTTTGTTGAAGGAAGTGAAAGGGAAAGACTTGGCTGAGCTAATTGCTGCTGGAAGGGAGAAGTTAGCTTCAGTACCATCAGGAGGTGGTGGTGGTGTTGCGGTTGCTTCTGCTACATCTGGAGGTGGAGGAGGTGGTGGTGCTCCTGCTGCTGAGTCCAAGAAAGAAGAGAAGAAAGAAGAGAAAGAAGAATCCGATGATGACATGGGTTTCAGTTTGTTCGAGTAA - >AT2G27720.2
ATGAAGGTTGTTGCTGCGTTTTTGCTTGCCGTCTTGAGCGGGAAAGCTTCCCCAACCACTGGCGATATCAAGGATATTCTTGGATCAGGCATTATGGTGTTGGTATTGGACTGTGTTGTTATAGTTGGTGCTGAGACAGAGGATTCTCAGATTGAGCTTTTGTTGAAGGAAGTGAAAGGGAAAGACTTGGCTGAGCTAATTGCTGCTGGAAGGGAGAAGTTAGCTTCAGTACCATCAGGAGGTGGTGGTGGTGTTGCGGTTGCTTCTGCTACATCTGGAGGTGGAGGAGGTGGTGGTGCTCCTGCTGCTGAGTCCAAGAAAGAAGAGAAGAAAGAAGAGAAAGAAGAATCCGATGATGACATGGGTTTCAGTTTGTTCGAGTAA
Protein Sequence
- >AT2G27720.3
MKVVAAFLLAVLSGKASPTTGDIKDILGSGIMVLVLDCVVIVGAETEDSQIELLLKEVKGKDLAELIAAGREKLASVPSGGGGGVAVASATSGGGGGGGAPAAESKKEEKKEEKEESDDDMGFSLFE - >AT2G27720.1
MKVVAAFLLAVLSGKASPTTGDIKDILGSGIMVLVLDCVVIVGAETEDSQIELLLKEVKGKDLAELIAAGREKLASVPSGGGGGVAVASATSGGGGGGGAPAAESKKEEKKEEKEESDDDMGFSLFE - >AT2G27720.4
MKVVAAFLLAVLSGKASPTTGDIKDILGSGIMVLVLDCVVIVGAETEDSQIELLLKEVKGKDLAELIAAGREKLASVPSGGGGGVAVASATSGGGGGGGAPAAESKKEEKKEEKEESDDDMGFSLFE - >AT2G27720.2
MKVVAAFLLAVLSGKASPTTGDIKDILGSGIMVLVLDCVVIVGAETEDSQIELLLKEVKGKDLAELIAAGREKLASVPSGGGGGVAVASATSGGGGGGGAPAAESKKEEKKEEKEESDDDMGFSLFE