AT2G27600

Gene Details

Gene ID: AT2G27600
Gene Symbol: ATSKD1, SKD1, VPS4
Gene Name: SUPPRESSOR OF K+ TRANSPORT GROWTH DEFECT1, VACUOLAR PROTEIN SORTING 4
Description: AAA-type ATPase family protein;(source:Araport11)
TAIR Accession: locus:2038678
Genome: Araport11_genome_release
Species: Arabidopsis thaliana

Functional Descriptions

PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
PO:0009010 — seed — semilla (Spanish, exact), 種子 (Japanese, exact), pyrene (narrow), diaspore (broad)
PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
PO:0025195 — pollen tube cell — célula del tubo polínico (Spanish, exact), 花粉管細胞 (Japanese, exact)

GO:0005737 — located in — cytoplasm
GO:0055078 — involved in — sodium ion homeostasis
GO:0016192 — acts upstream of or within — vesicle-mediated transport
GO:0005515 — enables — protein binding
GO:0009506 — located in — plasmodesma
GO:0005771 — located in — multivesicular body
GO:0010494 — located in — cytoplasmic stress granule
GO:0010091 — acts upstream of or within — trichome branching
GO:0007033 — involved in — vacuole organization
GO:0005634 — located in — nucleus
GO:0007033 — acts upstream of or within — vacuole organization
GO:0055075 — involved in — potassium ion homeostasis
GO:0007032 — acts upstream of or within — endosome organization
GO:0016197 — involved in — endosomal transport
GO:0005777 — located in — peroxisome

Functional Keywords

Literature and News

Gene Resources

Homologs

Sequences

cDNA Sequence

>AT2G27600.1
GTTTTCGTTATCATTCATCAAAACATTGAGCCAATTCTTCACAACTTCCAAAAACGCCTCACCGTTTCATTCTTCTACCAACCTACGCTCCGCTGTTTTCAAGACCTTTTCGTCTTCGTCGTCAAATCTAGCTTTTTTCTTCATCGCTTTGCATAATCCATTCCTTCTTCTCTCTTCTCCATCTCCTTCCTCCGATCTTCGTCTCCAATTCGGAATCTTCCTATCACAATTTCAAGGCTCCTTTAACCCTTGATCATCACCGATTCAATCAATTCGGAATCACAATTTCAAATCGAGAGAATTTCAATTTCTCTTGTAAAACCCTAAATTATGTACAGCAATTTCAAGGAACAAGCGATCGAGTACGTGAAGCAAGCGGTTCATGAAGACAATGCTGGGAATTACAATAAAGCTTTCCCTCTATACATGAACGCGCTTGAGTACTTCAAAACTCATCTCAAGTATGAGAAGAACCCTAAGATCAGAGAAGCTATTACCCAGAAATTCACCGAGTATCTCCGTCGTGCTGAGGAGATCCGTGCTGTTCTCGATGAAGGTGGATCGGGTCCAGGATCTAACGGTGATGCAGCCGTCGCAACGAGGCCCAAAACTAAGCCTAAAGATGGAGAAGGTGGTGGTAAAGATGGAGAAGATCCTGAACAATCAAAGCTTCGAGCTGGGTTAAACTCTGCGATTGTTAGAGAGAAACCTAATATCAAGTGGTCAGATGTTGCTGGGCTTGAAAGTGCTAAACAAGCTCTGCAGGAAGCTGTGATTTTGCCTGTCAAGTTTCCACAGTTCTTCACTGGAAAGAGACGGCCTTGGAGAGCTTTTCTGTTGTATGGGCCTCCTGGAACAGGAAAATCGTATTTGGCTAAGGCTGTTGCCACTGAAGCTGACTCTACCTTTTTTAGCGTGTCTTCATCAGACCTTGTCTCGAAGTGGATGGGTGAAAGTGAGAAGCTAGTATCAAACCTTTTCGAGATGGCCCGTGAAAGTGCTCCCTCGATTATTTTTGTTGATGAGATAGATTCTTTGTGTGGTACACGTGGAGAAGGAAACGAGAGTGAAGCTTCAAGACGTATCAAAACAGAGCTTCTAGTGCAGATGCAGGGTGTTGGACACAATGATGAGAAAGTACTTGTACTTGCAGCAACCAATACACCCTATGCTCTTGATCAGGCTATCCGGCGACGTTTTGACAAGCGTATCTATATTCCTCTCCCAGAGGCCAAGGCTCGGCAGCACATGTTCAAAGTCCACTTGGGAGATACACCTCATAATTTAACTGAACCTGATTTTGAATATTTAGGCCAAAAGACAGAAGGGTTTTCTGGTTCAGATGTGTCTGTTTGTGTAAAAGATGTTCTGTTTGAACCTGTTCGTAAAACACAAGATGCAATGTTCTTTTTCAAGTCTCCTGATGGTACATGGATGCCATGTGGGCCTAGGCACCCTGGTGCCATCCAGACTACAATGCAAGATCTAGCAACAAAAGGGCTTGCCGAAAAGATTATTCCACCACCAATCACCAGAACAGATTTCGAGAAGGTACTTGCAAGACAAAGGCCAACAGTGAGCAAGTCTGACCTTGATGTCCACGAGAGATTCACACAGGAGTTTGGAGAAGAAGGTTGATAGATTTGACATTCCCATCAAGCATCTTTCACAATCATATTATTATTAGTCTCTTCACCATCTCCTTATGTATGTACTGAGAAGCAAAACAAAATCTCAAACCCATGTTTGATTTCTTCCCAAAACATTGAATTTGCTTTATTTCTCGAATTGTGTAAAAAAAAAATGTTCTGAACAATGTTTTCTATTTATTATGTCACCAAAAGTCTCCACATGAGCAAACTCCATCACTGCTAAAGTGATGAAACCGATTTGAATCTCT

CDS Sequence

>AT2G27600.1
ATGTACAGCAATTTCAAGGAACAAGCGATCGAGTACGTGAAGCAAGCGGTTCATGAAGACAATGCTGGGAATTACAATAAAGCTTTCCCTCTATACATGAACGCGCTTGAGTACTTCAAAACTCATCTCAAGTATGAGAAGAACCCTAAGATCAGAGAAGCTATTACCCAGAAATTCACCGAGTATCTCCGTCGTGCTGAGGAGATCCGTGCTGTTCTCGATGAAGGTGGATCGGGTCCAGGATCTAACGGTGATGCAGCCGTCGCAACGAGGCCCAAAACTAAGCCTAAAGATGGAGAAGGTGGTGGTAAAGATGGAGAAGATCCTGAACAATCAAAGCTTCGAGCTGGGTTAAACTCTGCGATTGTTAGAGAGAAACCTAATATCAAGTGGTCAGATGTTGCTGGGCTTGAAAGTGCTAAACAAGCTCTGCAGGAAGCTGTGATTTTGCCTGTCAAGTTTCCACAGTTCTTCACTGGAAAGAGACGGCCTTGGAGAGCTTTTCTGTTGTATGGGCCTCCTGGAACAGGAAAATCGTATTTGGCTAAGGCTGTTGCCACTGAAGCTGACTCTACCTTTTTTAGCGTGTCTTCATCAGACCTTGTCTCGAAGTGGATGGGTGAAAGTGAGAAGCTAGTATCAAACCTTTTCGAGATGGCCCGTGAAAGTGCTCCCTCGATTATTTTTGTTGATGAGATAGATTCTTTGTGTGGTACACGTGGAGAAGGAAACGAGAGTGAAGCTTCAAGACGTATCAAAACAGAGCTTCTAGTGCAGATGCAGGGTGTTGGACACAATGATGAGAAAGTACTTGTACTTGCAGCAACCAATACACCCTATGCTCTTGATCAGGCTATCCGGCGACGTTTTGACAAGCGTATCTATATTCCTCTCCCAGAGGCCAAGGCTCGGCAGCACATGTTCAAAGTCCACTTGGGAGATACACCTCATAATTTAACTGAACCTGATTTTGAATATTTAGGCCAAAAGACAGAAGGGTTTTCTGGTTCAGATGTGTCTGTTTGTGTAAAAGATGTTCTGTTTGAACCTGTTCGTAAAACACAAGATGCAATGTTCTTTTTCAAGTCTCCTGATGGTACATGGATGCCATGTGGGCCTAGGCACCCTGGTGCCATCCAGACTACAATGCAAGATCTAGCAACAAAAGGGCTTGCCGAAAAGATTATTCCACCACCAATCACCAGAACAGATTTCGAGAAGGTACTTGCAAGACAAAGGCCAACAGTGAGCAAGTCTGACCTTGATGTCCACGAGAGATTCACACAGGAGTTTGGAGAAGAAGGTTGA

Protein Sequence

>AT2G27600.1
MYSNFKEQAIEYVKQAVHEDNAGNYNKAFPLYMNALEYFKTHLKYEKNPKIREAITQKFTEYLRRAEEIRAVLDEGGSGPGSNGDAAVATRPKTKPKDGEGGGKDGEDPEQSKLRAGLNSAIVREKPNIKWSDVAGLESAKQALQEAVILPVKFPQFFTGKRRPWRAFLLYGPPGTGKSYLAKAVATEADSTFFSVSSSDLVSKWMGESEKLVSNLFEMARESAPSIIFVDEIDSLCGTRGEGNESEASRRIKTELLVQMQGVGHNDEKVLVLAATNTPYALDQAIRRRFDKRIYIPLPEAKARQHMFKVHLGDTPHNLTEPDFEYLGQKTEGFSGSDVSVCVKDVLFEPVRKTQDAMFFFKSPDGTWMPCGPRHPGAIQTTMQDLATKGLAEKIIPPPITRTDFEKVLARQRPTVSKSDLDVHERFTQEFGEEG