Information report for AT2G27580
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
- PO:0025195 — pollen tube cell — célula del tubo polínico (Spanish, exact), 花粉管細胞 (Japanese, exact)
- GO:0008270 — enables — zinc ion binding
- GO:0005634 — located in — nucleus
- GO:0009408 — acts upstream of or within — response to heat
- GO:0003677 — enables — DNA binding
Functional Keywords
Literature and News
- Genome-wide analysis of the stress associated protein (SAP) gene family containing A20/AN1 zinc-finger(s) in rice and their phylogenetic relationship with Arabidopsis. DOI: 10.1007/s00438-006-0165-1 ; PMID: 17033811
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. DOI: 10.1186/1471-2229-13-229 ; PMID: 24377444
- Oligouridylate Binding Protein 1b Plays an Integral Role in Plant Heat Stress Tolerance. DOI: 10.3389/fpls.2016.00853 ; PMID: 27379136
- Transcriptional Profiling Reveals a Time-of-Day-Specific Role of REVEILLE 4/8 in Regulating the First Wave of Heat Shock-Induced Gene Expression in Arabidopsis. DOI: 10.1105/tpc.19.00519 ; PMID: 31358650
Gene Resources
- UniProt: A0A178VV29
- EMBL: CACRSJ010000105, CACSHJ010000088, LR881467
- AlphaFoldDB: A0A178VV29
- EnsemblPlants: AT2G27580.1, AT2G27580.2
- Gramene: AT2G27580.1, AT2G27580.2
- KEGG: ath:AT2G27580
- Orthologous matrix: APQQNRC
- ExpressionAtlas: AT2G27580
- InterPro: IPR000058, IPR002653, IPR035896
- PANTHER: PTHR10634, PTHR10634:SF98
- SUPFAM: SSF118310, SSF57716
- PROSITE: PS51036, PS51039
- Gene3D: 1.20.5.4770, 4.10.1110.10
- OrthoDB: A0A178VV29
- SWISS-MODEL: A0A178VV29
Homologs
Sequences
cDNA Sequence
- >AT2G27580.1
AAATAACACCATTTTCCACAAATTGTCCAATTTCCATCTTACGGCCAACAAAAAAAAGAGTAAAATAACAATTTAATTTTGTATCGATTGCGTCGTCGTTAGTTTTCCCATTTCCTCATAATTCTTCATCTCTTTCCTTTCTCATCTCTCGATTCCTTTCTTTCTTTCCATATTCCATTGATTTCTCTCTTCTTATAAAAATACAGATTCTCTCTTCTTAGAACCATCACCGATTCGAACAGATCTAATAAATCGTTTTTTTCACCAGATTTTTTTCGCCGGAGTTTGTTTTGATCCATTCTGTTATGGCGGAAGAACACAGACTTCAAGAACCACGATTATGTGCTAACAATTGTGGCTTCTTCGGAAGCACAGCTACACAAAATCTCTGTTCCAAATGTTTTCGAGATCTTCAACATCAAGAACAAAACTCTTCCACCGCCAAACATGCTCTTACCCAATCCTTAGCCGCCGTTGGCGCTGCTGCGTCTTCCTCCGTGTCGCCACCGCCTCCGCCTCCAGCTGATTCGAAAGAAATCGTTGAAGCGAAATCAGAGAAACGAGCGGCGGCTGAACCGGAGGAGGCGGATGGTCCGCCGCAAGATCCGAAGCGGTGTTTGACTTGTCGGCGGCGCGTGGGAATCACGGGGTTTCGGTGTAGGTGTGGTTTCGTTTTCTGCGGGACGCATAGGTACGCGGAGCAACATGAATGTTCGTTTGATTTCAAGCGGATGGGGAAGGATAAGATCGCTAAAGCGAATCCGATTGTGAAAGCTGATAAGCTTGAGAAGATTTGACTTTGTTGTTTGTTGTTTGTTGTTGTTGCTTTGGTTTTGTGCGTTTGAATGAAACACACATGAAGAAGAAAGAGCAAGAAACAAACATGTCAATGTAAATTTAAGCTTTATTTGATGATTTCTTCAGTTTGGTTATTAAATTTGCTTATTATTGATTTGATTGTTCCGTTTGATGATCTTGTAGAAGGCTTAAGTCGTATTATCAATGTGTAGAATTTGGATTTGGTTGA - >AT2G27580.2
AAATAACACCATTTTCCACAAATTGTCCAATTTCCATCTTACGGCCAACAAAAAAAAGAGTAAAATAACAATTTAATTTTGTATCGATTGCGTCGTCGTTAGTTTTCCCATTTCCTCATAATTCTTCATCTCTTTCCTTTCTCATCTCTCGATTCCTTTCTTTCTTTCCATATTCCATTGATTTCTCTCTTCTTATAAAAATACAGATTCTCTCTTCTTAGAACCATCACCGATTCGAACAGATCTAATAAATCGTTTTTTTCACCAGATTTTTTTCGCCGGAGTTTGTTTTGATCCATTCTGTTATGGCGGAAGAACACAGACTTCAAGAACCACGATTATGTGCTAACAATTGTGGCTTCTTCGGAAGCACAGCTACACAAAATCTCTGTTCCAAATGTTTTCGAGATCTTCAACATCAAGAACAAAACTCTTCCACCGCCAAACATGCTCTTACCCAATCCTTAGCCGCCGTTGGCGCTGCTGCGTCTTCCTCCGTGTCGCCACCGCCTCCGCCTCCAGCTGATTCGAAAGAAATCGTTGAAGCGAAATCAGAGAAACGAGCGGCGGCTGAACCGGAGGAGGCGGATGGTCCGCCGCAAGATCCGAAGCGGTGTTTGACTTGTCGGCGGCGCGTGGGAATCACGGGGTTTCGGTGTAGGTGTGGTTTCGTTTTCTGCGGGACGCATAGGTACGCGGAGCAACATGAATGTTCGTTTGATTTCAAGCGGATGGGGAAGGATAAGATCGCTAAAGCGAATCCGATTGTGAAAGCTGATAAGCTTGAGAAGATTTGACTTTGTTGTTTGTTGTTTGTTGTTGTTGCTTTGGTTTTGTGCGTTTGAATGAAACACACATGAAGAAGAAAGAGCAAGAAACAAACATGTCAATGTAAATTTAAGCTTTATTTGATGATTTCTTCAGTTTGGTTATTAAATTTGCTTATTATTGATTTGATTGTTCCGTTTGATGATCTTGTAGAAGGCTTAAGTCGTATTATCAATGTGTAGAATTTGGATTTGGTTGA
CDS Sequence
- >AT2G27580.1
ATGGCGGAAGAACACAGACTTCAAGAACCACGATTATGTGCTAACAATTGTGGCTTCTTCGGAAGCACAGCTACACAAAATCTCTGTTCCAAATGTTTTCGAGATCTTCAACATCAAGAACAAAACTCTTCCACCGCCAAACATGCTCTTACCCAATCCTTAGCCGCCGTTGGCGCTGCTGCGTCTTCCTCCGTGTCGCCACCGCCTCCGCCTCCAGCTGATTCGAAAGAAATCGTTGAAGCGAAATCAGAGAAACGAGCGGCGGCTGAACCGGAGGAGGCGGATGGTCCGCCGCAAGATCCGAAGCGGTGTTTGACTTGTCGGCGGCGCGTGGGAATCACGGGGTTTCGGTGTAGGTGTGGTTTCGTTTTCTGCGGGACGCATAGGTACGCGGAGCAACATGAATGTTCGTTTGATTTCAAGCGGATGGGGAAGGATAAGATCGCTAAAGCGAATCCGATTGTGAAAGCTGATAAGCTTGAGAAGATTTGA - >AT2G27580.2
ATGGCGGAAGAACACAGACTTCAAGAACCACGATTATGTGCTAACAATTGTGGCTTCTTCGGAAGCACAGCTACACAAAATCTCTGTTCCAAATGTTTTCGAGATCTTCAACATCAAGAACAAAACTCTTCCACCGCCAAACATGCTCTTACCCAATCCTTAGCCGCCGTTGGCGCTGCTGCGTCTTCCTCCGTGTCGCCACCGCCTCCGCCTCCAGCTGATTCGAAAGAAATCGTTGAAGCGAAATCAGAGAAACGAGCGGCGGCTGAACCGGAGGAGGCGGATGGTCCGCCGCAAGATCCGAAGCGGTGTTTGACTTGTCGGCGGCGCGTGGGAATCACGGGGTTTCGGTGTAGGTGTGGTTTCGTTTTCTGCGGGACGCATAGGTACGCGGAGCAACATGAATGTTCGTTTGATTTCAAGCGGATGGGGAAGGATAAGATCGCTAAAGCGAATCCGATTGTGAAAGCTGATAAGCTTGAGAAGATTTGA
Protein Sequence
- >AT2G27580.1
MAEEHRLQEPRLCANNCGFFGSTATQNLCSKCFRDLQHQEQNSSTAKHALTQSLAAVGAAASSSVSPPPPPPADSKEIVEAKSEKRAAAEPEEADGPPQDPKRCLTCRRRVGITGFRCRCGFVFCGTHRYAEQHECSFDFKRMGKDKIAKANPIVKADKLEKI - >AT2G27580.2
MAEEHRLQEPRLCANNCGFFGSTATQNLCSKCFRDLQHQEQNSSTAKHALTQSLAAVGAAASSSVSPPPPPPADSKEIVEAKSEKRAAAEPEEADGPPQDPKRCLTCRRRVGITGFRCRCGFVFCGTHRYAEQHECSFDFKRMGKDKIAKANPIVKADKLEKI