Gene Details:
- Gene ID: AT2G27530
- Gene Symbol: PGY1, uL1y
- Gene Name: PIGGYBACK1, Ribosomal Protein uL1y
- Description: Ribosomal protein L1p/L10e family;(source:Araport11)
- TAIR Accession: locus:2042087
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
Gene Ontology:
- GO:0000470 — involved in — maturation of LSU-rRNA
- GO:0022625 — located in — cytosolic large ribosomal subunit
- GO:0022625 — part of — cytosolic large ribosomal subunit
- GO:0090696 — acts upstream of or within — post-embryonic plant organ development
- GO:0006412 — involved in — translation
- GO:0003723 — enables — RNA binding
- GO:0022626 — located in — cytosolic ribosome
- GO:0005777 — located in — peroxisome
- GO:0005737 — located in — cytoplasm
- GO:0009955 — acts upstream of or within — adaxial/abaxial pattern specification
Function-related keywords:
- shoot axis apex , leaf lamina base , root , shoot system , plant embryo , vascular leaf , stamen , sepal , flower , inflorescence flower pedicel , cotyledon , petiole , hypocotyl , leaf apex , collective leaf structure , pollen , plant sperm cell
Literature:
- The organization of cytoplasmic ribosomal protein genes in the Arabidopsis genome. DOI: 6834 ; PMID: 11598216
- The Arabidopsis root transcriptome by serial analysis of gene expression. Gene identification using the genome sequence. DOI: 10.1104/pp.103.030536 ; PMID: 14730065
- Integrative gene-metabolite network with implemented causality deciphers informational fluxes of sulphur stress response. DOI: 10.1093/jxb/eri179 ; PMID: 15911562
- The maize root transcriptome by serial analysis of gene expression. DOI: 10.1104/pp.104.057638 ; PMID: 15965024
- The transcription factor ATAF2 represses the expression of pathogenesis-related genes in Arabidopsis. DOI: 10.1111/j.1365-313X.2005.02488.x ; PMID: 16115070
- Analysis of the Arabidopsis cytosolic ribosome proteome provides detailed insights into its components and their post-translational modification. DOI: 10.1074/mcp.M700052-MCP200 ; PMID: 17934214
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Differential phosphorylation of ribosomal proteins in Arabidopsis thaliana plants during day and night. DOI: 10.1371/journal.pone.0029307 ; PMID: 22195043
- Plant cytoplasmic ribosomal proteins: an update on classification, nomenclature, evolution and resources. DOI: 10.1111/tpj.15667 ; PMID: 35000252
- An updated nomenclature for plant ribosomal protein genes. DOI: 10.1093/plcell/koac333 ; PMID: 36423343
- Proteomic characterization of evolutionarily conserved and variable proteins of Arabidopsis cytosolic ribosomes. DOI: 10.1104/pp.104.053637 ; PMID: 15734919
- Analysis of the Arabidopsis cytosolic ribosome proteome provides detailed insights into its components and their post-translational modification. DOI: 10.1074/mcp.M700052-MCP200 ; PMID: 17934214
- Proteomic characterization of evolutionarily conserved and variable proteins of Arabidopsis cytosolic ribosomes. DOI: 10.1104/pp.104.053637 ; PMID: 15734919
- Analysis of the Arabidopsis cytosolic ribosome proteome provides detailed insights into its components and their post-translational modification. DOI: 10.1074/mcp.M700052-MCP200 ; PMID: 17934214
Sequences:
cDNA Sequence
- >AT2G27530.1
TTTTTTAGTAATGATCACAAGCGGCCCACTAATATAACAAAAGCCCATGAAACGAAATCAATTCCCCTAGGGTTTTAGTCTCTTCCTTCCATTTTTCTTCTTCCTTGATATAAAATCTTCAGCCGCCTCTGAAACATAACTAGGGCTTCCGCTTTCTTCACCATTCAGGATCAGAGATTCGTGACCTGAGAAGACACTCAATATGAGTAAGCTTCAGAGTGAGGCTGTTAGAGAAGCCATAACGACTATCAAGGGAAAATCTGAGGAGAAGAAGCGTAACTTTGTTGAGACAGTGGAGCTTCAGATTGGTCTGAAGAACTATGACCCACAAAAGGATAAGCGTTTCAGTGGATCTGTGAAGCTCCCACATATTCCTCGCCCAAAAATGAAGATCTGTATGCTTGGAGATGCTCAGCATGTTGAGGAGGCAGAGAAAATGGGACTTAGTAACATGGATGTTGAGGCTTTGAAAAAGCTTAACAAGAACAAGAAGCTTGTTAAGAAGCTTGCTAAGTCTTACCATGCTTTCTTGGCTTCTGAGTCTGTCATTAAGCAGATTCCTCGTCTTCTTGGTCCTGGTCTTAACAAGGCAGGAAAGTTCCCAACACTTGTGAGTCACCAAGAGTCATTGGAAGCAAAGGTGAATGAGACCAAAGCAACAGTGAAGTTCCAGTTGAAGAAAGTTCTGTGTATGGGTGTTGCTGTTGGTAACCTTTCCATGGAAGAGAAGCAGCTCTTCCAGAATGTGCAGATGAGTGTTAACTTCCTCGTCTCGCTCTTGAAGAAGAATTGGCAAAACGTAAGGTGTTTGTACTTGAAGAGCACCATGGGACCACCACAAAGAATCTTTTGAGCTCTCTCTTCTTATCCTTCTTCCATCTCAGAATTTTGCATTCTGTTTTTGTTTCAGAGATCTGTGCTTGTTGGGATATGGTTTGGATTTATATTAGCAGTTGTTTTTTGTTGACAATATATTATGCAATATTCGTTTTAATTATCATATTTTTTCTTTATCTCCTAAAATATGATTTTGATTTCATCAGTTTGAAATTTTGTCTTTCAAACCTTAAAATTTTCTG - >AT2G27530.2
TTTTTTAGTAATGATCACAAGCGGCCCACTAATATAACAAAAGCCCATGAAACGAAATCAATTCCCCTAGGGTTTTAGTCTCTTCCTTCCATTTTTCTTCTTCCTTGATATAAAATCTTCAGCCGCCTCTGAAACATAACTAGGGCTTCCGCTTTCTTCACCATTCAGGATCAGAGATTCGTGACCTGAGAAGACACTCAATATGAGTAAGCTTCAGAGTGAGGCTGTTAGAGAAGCCATAACGACTATCAAGGGAAAATCTGAGGAGAAGAAGCGTAACTTTGTTGAGACAGTGGAGCTTCAGATTGGTCTGAAGAACTATGACCCACAAAAGGATAAGCGTTTCAGTGGATCTGTGAAGCTCCCACATATTCCTCGCCCAAAAATGAAGATCTGTATGCTTGGAGATGCTCAGCATGTTGAGGAGGCAGAGAAAATGGGACTTAGTAACATGGATGTTGAGGCTTTGAAAAAGCTTAACAAGAACAAGAAGCTTGTTAAGAAGCTTGCTAAGTCTTACCATGCTTTCTTGGCTTCTGAGTCTGTCATTAAGCAGATTCCTCGTCTTCTTGGTCCTGGTCTTAACAAGGCAGGAAAGTTCCCAACACTTGTGAGTCACCAAGAGTCATTGGAAGCAAAGGTGAATGAGACCAAAGCAACAGTGAAGTTCCAGTTGAAGAAAGTTCTGTGTATGGGTGTTGCTGTTGGTAACCTTTCCATGGAAGAGAAGCAGCTCTTCCAGAATGTGCAGATGAGTGTTAACTTCCTCGTCTCGCTCTTGAAGAAGAATTGGCAAAACGTAAGGTGTTTGTACTTGAAGAGCACCATGGGACCACCACAAAGAATCTTTTGAGCTCTCTCTTCTTATCCTTCTTCCATCTCAGAATTTTGCATTCTGTTTTTGTTTCAGAGATCTGTGCTTGTTGGGATATGGTTTGGATTTATATTAGCAGTTGTTTTTTGTTGACAATATATTATGCAATATTCGTTTTAATTATCATATTTTTTCTTTATCTCCTAAAATATGATTTTGATTTCATCAGTTTGAAATTTTGTCTTTCAAACCTTAAAATTTTCTG
CDS Sequence
- >AT2G27530.1
ATGAGTAAGCTTCAGAGTGAGGCTGTTAGAGAAGCCATAACGACTATCAAGGGAAAATCTGAGGAGAAGAAGCGTAACTTTGTTGAGACAGTGGAGCTTCAGATTGGTCTGAAGAACTATGACCCACAAAAGGATAAGCGTTTCAGTGGATCTGTGAAGCTCCCACATATTCCTCGCCCAAAAATGAAGATCTGTATGCTTGGAGATGCTCAGCATGTTGAGGAGGCAGAGAAAATGGGACTTAGTAACATGGATGTTGAGGCTTTGAAAAAGCTTAACAAGAACAAGAAGCTTGTTAAGAAGCTTGCTAAGTCTTACCATGCTTTCTTGGCTTCTGAGTCTGTCATTAAGCAGATTCCTCGTCTTCTTGGTCCTGGTCTTAACAAGGCAGGAAAGTTCCCAACACTTGTGAGTCACCAAGAGTCATTGGAAGCAAAGGTGAATGAGACCAAAGCAACAGTGAAGTTCCAGTTGAAGAAAGTTCTGTGTATGGGTGTTGCTGTTGGTAACCTTTCCATGGAAGAGAAGCAGCTCTTCCAGAATGTGCAGATGAGTGTTAACTTCCTCGTCTCGCTCTTGAAGAAGAATTGGCAAAACGTAAGGTGTTTGTACTTGAAGAGCACCATGGGACCACCACAAAGAATCTTTTGA - >AT2G27530.2
ATGAGTAAGCTTCAGAGTGAGGCTGTTAGAGAAGCCATAACGACTATCAAGGGAAAATCTGAGGAGAAGAAGCGTAACTTTGTTGAGACAGTGGAGCTTCAGATTGGTCTGAAGAACTATGACCCACAAAAGGATAAGCGTTTCAGTGGATCTGTGAAGCTCCCACATATTCCTCGCCCAAAAATGAAGATCTGTATGCTTGGAGATGCTCAGCATGTTGAGGAGGCAGAGAAAATGGGACTTAGTAACATGGATGTTGAGGCTTTGAAAAAGCTTAACAAGAACAAGAAGCTTGTTAAGAAGCTTGCTAAGTCTTACCATGCTTTCTTGGCTTCTGAGTCTGTCATTAAGCAGATTCCTCGTCTTCTTGGTCCTGGTCTTAACAAGGCAGGAAAGTTCCCAACACTTGTGAGTCACCAAGAGTCATTGGAAGCAAAGGTGAATGAGACCAAAGCAACAGTGAAGTTCCAGTTGAAGAAAGTTCTGTGTATGGGTGTTGCTGTTGGTAACCTTTCCATGGAAGAGAAGCAGCTCTTCCAGAATGTGCAGATGAGTGTTAACTTCCTCGTCTCGCTCTTGAAGAAGAATTGGCAAAACGTAAGGTGTTTGTACTTGAAGAGCACCATGGGACCACCACAAAGAATCTTTTGA
Protein Sequence
- >AT2G27530.1
MSKLQSEAVREAITTIKGKSEEKKRNFVETVELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICMLGDAQHVEEAEKMGLSNMDVEALKKLNKNKKLVKKLAKSYHAFLASESVIKQIPRLLGPGLNKAGKFPTLVSHQESLEAKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQLFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPQRIF - >AT2G27530.2
MSKLQSEAVREAITTIKGKSEEKKRNFVETVELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICMLGDAQHVEEAEKMGLSNMDVEALKKLNKNKKLVKKLAKSYHAFLASESVIKQIPRLLGPGLNKAGKFPTLVSHQESLEAKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQLFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPQRIF