Gene Details:
- Gene ID: AT2G27470
- Gene Symbol: NF-YB11
- Gene Name: nuclear factor Y, subunit B11
- Description: nuclear factor Y, subunit B11;(source:Araport11)
- TAIR Accession: locus:2038648
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
Gene Ontology:
- GO:0005515 — enables — protein binding
- GO:0031507 — involved in — heterochromatin formation
- GO:0031490 — enables — chromatin DNA binding
- GO:0009414 — involved in — response to water deprivation
- GO:0006355 — acts upstream of or within — regulation of DNA-templated transcription
- GO:0008623 — part of — CHRAC
- GO:0009408 — involved in — response to heat
- GO:0003700 — enables — DNA-binding transcription factor activity
- GO:0006272 — involved in — leading strand elongation
- GO:0008622 — part of — epsilon DNA polymerase complex
- GO:0006974 — involved in — DNA damage response
- GO:0046982 — enables — protein heterodimerization activity
Function-related keywords:
- shoot axis apex , leaf lamina base , root , shoot system , plant embryo , vascular leaf , stamen , sepal , flower , inflorescence flower pedicel , cotyledon , petiole , hypocotyl , leaf apex , collective leaf structure
Literature:
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- A genome-wide identification of E2F-regulated genes in Arabidopsis. DOI: 10.1046/j.1365-313x.2003.01662.x ; PMID: 12609051
- The Arabidopsis thaliana Nuclear Factor Y Transcription Factors. DOI: 10.3389/fpls.2016.02045 ; PMID: 28119722
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
Sequences:
cDNA Sequence
- >AT2G27470.1
CAGCTTACTGGGCCGATGTGTTTTGTTGTATTATTAACATAAAGGCGGGAAAGACGGCGACTGAGAGAGAGGAGAGAAGAATGGAGTCGGAGAAAGTGGTGGTGGACGAGCTGCCGCTAGCTATTGTGCGCCGGGTGGTGAAGAAGAAGCTGTCGGAGTGTTCGCCGGATTATGACGTCAGTATTCACAAGGAAGCTTTGCTCGCATTCTCAGAGAGTGCGAGGATCTTCATCCACTACCTCTCCGCCACGGCAAATGATTTTTGTAAAGATGCAAGAAGACAAACTATGAAGGCTGATGATGTGTTTAAGGCATTAGAAGAAATGGATTTTTCAGAATTTTTGGAGCCGCTTAAATCTTCTCTTGAAGATTTTAAGAAGAAGAATGCGGGGAAAAAGGCGGGTGCTGCAGCTGCTTCGTATCCTGCTGGTGGAGCTGCTTTGAAATCTTCAAGTGGAACTGCTTCGAAGCCCAAAGAGACGAAGAAGAGGAAACAGGAAGAACCATCTACGCAAAAGGGTGCAAGGAAAAGCAAAATAGATGAGGAAACTAAGAGGAATGACGAGGAGACTGAGAATGACAACACGGAAGAAGAGAATGGAAACGATGAGGAGGATGAGAATGGAAACGATGAGGAAGATGAGAATGACGATGAAAATACAGAAGAGAATGGGAATGATGAGGAGAACGACGATGAAAATACGGAAGAGAATGGGAATGATGAGGAGAACGAGAAGGAGGATGAGGAAAACAGCATGGAAGAGAATGGGAATGAGAGCGAAGAGAGCGGGAATGAGGACCATAGCATGGAAGAAAATGGGAGCGGGGTTGGTGAAGATAATGAGAACGAGGACGGGAGCGTAAGTGGAAGTGGTGAAGAGGTAGAGAGTGATGAAGAAGATGAATGAACTCAAGGTTATATTTTTGCTAAGAACATGTTTTCAGGTTTATGTTGGAGATTAGCTTGTAAGCTTGAAGCAGTGGTTGTGGCCATGAGCATGTAATAGACTAACATATCTTTTTGCTCTTTGGCTCTAGTGTTACCAAATATGTAAGTCAAAGTTTAGAAAATGAAGTTTTGCAACAAAATTTTAGCTTAATTATTCATTTTGATTAAGAGAGC
CDS Sequence
- >AT2G27470.1
ATGGAGTCGGAGAAAGTGGTGGTGGACGAGCTGCCGCTAGCTATTGTGCGCCGGGTGGTGAAGAAGAAGCTGTCGGAGTGTTCGCCGGATTATGACGTCAGTATTCACAAGGAAGCTTTGCTCGCATTCTCAGAGAGTGCGAGGATCTTCATCCACTACCTCTCCGCCACGGCAAATGATTTTTGTAAAGATGCAAGAAGACAAACTATGAAGGCTGATGATGTGTTTAAGGCATTAGAAGAAATGGATTTTTCAGAATTTTTGGAGCCGCTTAAATCTTCTCTTGAAGATTTTAAGAAGAAGAATGCGGGGAAAAAGGCGGGTGCTGCAGCTGCTTCGTATCCTGCTGGTGGAGCTGCTTTGAAATCTTCAAGTGGAACTGCTTCGAAGCCCAAAGAGACGAAGAAGAGGAAACAGGAAGAACCATCTACGCAAAAGGGTGCAAGGAAAAGCAAAATAGATGAGGAAACTAAGAGGAATGACGAGGAGACTGAGAATGACAACACGGAAGAAGAGAATGGAAACGATGAGGAGGATGAGAATGGAAACGATGAGGAAGATGAGAATGACGATGAAAATACAGAAGAGAATGGGAATGATGAGGAGAACGACGATGAAAATACGGAAGAGAATGGGAATGATGAGGAGAACGAGAAGGAGGATGAGGAAAACAGCATGGAAGAGAATGGGAATGAGAGCGAAGAGAGCGGGAATGAGGACCATAGCATGGAAGAAAATGGGAGCGGGGTTGGTGAAGATAATGAGAACGAGGACGGGAGCGTAAGTGGAAGTGGTGAAGAGGTAGAGAGTGATGAAGAAGATGAATGA
Protein Sequence
- >AT2G27470.1
MESEKVVVDELPLAIVRRVVKKKLSECSPDYDVSIHKEALLAFSESARIFIHYLSATANDFCKDARRQTMKADDVFKALEEMDFSEFLEPLKSSLEDFKKKNAGKKAGAAAASYPAGGAALKSSSGTASKPKETKKRKQEEPSTQKGARKSKIDEETKRNDEETENDNTEEENGNDEEDENGNDEEDENDDENTEENGNDEENDDENTEENGNDEENEKEDEENSMEENGNESEESGNEDHSMEENGSGVGEDNENEDGSVSGSGEEVESDEEDE