Gene Details:
- Gene ID: AT2G27460
- Gene Symbol: AtSEC23D
- Gene Name:
- Description: sec23/sec24 transport family protein;(source:Araport11)
- TAIR Accession: locus:2038633
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
Gene Ontology:
- GO:0010584 — acts upstream of or within — pollen exine formation
- GO:0008270 — enables — zinc ion binding
- GO:0090110 — involved in — COPII-coated vesicle cargo loading
- GO:0006886 — involved in — intracellular protein transport
- GO:0048658 — acts upstream of or within — anther wall tapetum development
- GO:0030127 — part of — COPII vesicle coat
- GO:0005737 — located in — cytoplasm
- GO:0000149 — enables — SNARE binding
- GO:0070971 — located in — endoplasmic reticulum exit site
- GO:0070971 — is active in — endoplasmic reticulum exit site
Function-related keywords:
- shoot axis apex , leaf lamina base , root , shoot system , plant embryo , vascular leaf , stamen , sepal , flower , inflorescence flower pedicel , cotyledon , petiole , hypocotyl , leaf apex , collective leaf structure , pollen
Literature:
- The Arabidopsis COPII components, AtSEC23A and AtSEC23D, are essential for pollen wall development and exine patterning. DOI: 10.1093/jxb/ery015 ; PMID: 29390074
Sequences:
cDNA Sequence
- >AT2G27460.1
CCAAAAAAAAAAGACGTTCACAAAAGCTAACGTGCGCTGGAGACGAATTTTACTGGAAAAGCTAACGTGCGCCTAATTTCCACCGTGCTCATCCAATTTCACCAAATCTCCGAAAACCTTAAAACCAGAATCAAAATTTTCACATTTGGAAGGATCTGATCTGAAACAATGGCAGTGAGAGCAACGGTGTCGCGTTTTCCGATCGATTCAGACGCTCAAGAGGCGTCAGGACTTCCTTGGGGACTGACAGTAACACCATTCGCGGCCAAAGACGAGAACGGAATCGGACCAGCGTGCGGATCTAACGGTCATCTTCTTCCTCGTTGCGAAAACTGCTACGCTTACTTCAATACCTATTGTGAGCTTGATCAATGGGCTTGGAATTGCTCGCTTTGTGGAACTCTCAATGGACTTCCTTCTGATGCTATTGCTCGTTACTCTAATCCTCACTCTATACCTGAAATGACTTCCTCCTTCATTGATCTTGAGATGCCTCTGGATGGATCGGAGGAAGAGATGACGCAAGCACGACCTGTGTATGTTGCGGCGATTGATATCTCTTCTTCTGAGGAATTTTTGGAGCTTACAAAAAGTGCATTGCTAGCCGCTCTGGAAGCTCTAAGTCCAGGGGCTCTTTTTGGTCTTGTTACGTTCAGTCACAAAATAGGACTGTATGATGTTCAAGGACCTATACCAGTTGTAAAGAATGTATTCATTCCCCCTGATGGGGAGAGCAGCTTATCGCTAGAACTTGAGGATGTCATGCCCTTGTTACAATTTTTGGCTCCGGTAGAAACTTGCAAGGATCGTATTGCTGCTGCACTTGAGACACTCAGACCAATTACTTCTTGGGAGAGATCAGCTGGAGCAGGTCAAGGGATGGATAGTGTGTTGATGGGTGGTAGGGGCTTTGGTACAGCTATGGAAGCTCTATTCAACTATCTAGGATCTGAATTTGGGAATACATTTGCATTAGCTAGGGTGTTTGCTTTCCTATCTGGTCCTCCTGATTATGGACGTGGACAATTGGATACAAGTAGATATGGTGAACAATATGCAAGTAAAAGGGTAGATGCTGATCGTGCTCTACTTCCTGAACAAACACCATTCTACAAAGACCTAGCCACCATTGCTGTCCAATCAGGTGTATGTGTAGATTTATTTGCAGTTACAAATGAGTACACAGATTTAGCATCCCTGAAGTTCCTTAGCATTGAAAGTGGCGGTTCACTGTTTTTGTATTCAAGCACTGATGATTCAACTCTTCCCCAAGACATGTTTCGAATGCTTAACCGGCCGTATGCATTCAATTGTGTCTTGAGATTGAGGACGTCAACTGAATTCAAACCTGGCAACTCTTTTGGTCACTTCTTTCCAGATCCACAGTACGAGAACCTTCAGCATATCATCTGCTGTGATTCATATGCAACATATGCATATGACTTTGAATTTGCAGATAACACTGGATTTTCCAGGCATTCTGGAGAGCAACCAGTGGTGCAAATTGCATTTCAGTACACAGTTGTTGTACCTCCCGAGGGACTGTCAAATTCAGAAATGTCATCTTCAAGTAGAGGCAAGCACACACTTCAGAGACGATTAAGGATCAGAACCATGCAATTTGGAACTGCCCACAATATCAATGAAATTTACGACAGTGTGGATCATGAAGTTGTTCTCTCATTGCTCGTTCACAAGGTAATTTTAGCCTCTCTGGAAGATGGAGTCAGAGAAGGGAGGGCATTGCTGCATGATTGGCTAGTAATTCTAACAGCACAATACAACGATGCCTTTAACCTTGTCCAATACAAAAACGGAAATAAGTCAATGAGTTCTCAGATTGATATCACGTTTTCACAATGTCCTCAACTTGAGCCTTTGCCTCGTTTAGTCTTTGCCTTACTCCGTAATCCCCTTCTCCGGTTTCATGAAGAAGGTGTTCATCCTGATTACAGAATCTACTTGCAATGCCTTTTCAGTGTGTTGGACCCGAGCTCTCTTCATTGCGGCATTTACCCAGCACTAATGTCATATTCAACACCGGATACACTGGCATATCCGCGTCATTCGTTGAGCCGTGCAGCATTGATAACAAGTGGTAGTCCGATATTTTTCCTAGATGCATATACCACTTTGATAGTCTTCTACTCATCAACAGCAGACCCGTCAATACCTTTCCCTCCACCTCAAGACTGTTTATTGAGGCAGACCATAAATAAAGTGAAGCAAGAAAGGAGCATCACACCAAAACTAGTGTTTATCCGAGGAGGACGAGACGATGCTACTGTCTTTGAGAACTATCTTATAGAAGAACAAGATGTGGACGGTAATGGTTTTGCTAGCGCCATGGGTTTCGTGTCTTTCCTCGATGATATTTCGCAGCGTGTCACTGAATACATGAAGTGAAAGCCAAATGACCCTCTAGTTTATTATACATCCAAACTCAAAATTTTCAACTGTGTCAGAGTTTTACTCTTCTTGTTGTAACATTTGCTTTAGACTAGCATCCCAACTTTTTTGCTCTCTTAATCAAAATGAATAATTAAGCTA
CDS Sequence
- >AT2G27460.1
ATGGCAGTGAGAGCAACGGTGTCGCGTTTTCCGATCGATTCAGACGCTCAAGAGGCGTCAGGACTTCCTTGGGGACTGACAGTAACACCATTCGCGGCCAAAGACGAGAACGGAATCGGACCAGCGTGCGGATCTAACGGTCATCTTCTTCCTCGTTGCGAAAACTGCTACGCTTACTTCAATACCTATTGTGAGCTTGATCAATGGGCTTGGAATTGCTCGCTTTGTGGAACTCTCAATGGACTTCCTTCTGATGCTATTGCTCGTTACTCTAATCCTCACTCTATACCTGAAATGACTTCCTCCTTCATTGATCTTGAGATGCCTCTGGATGGATCGGAGGAAGAGATGACGCAAGCACGACCTGTGTATGTTGCGGCGATTGATATCTCTTCTTCTGAGGAATTTTTGGAGCTTACAAAAAGTGCATTGCTAGCCGCTCTGGAAGCTCTAAGTCCAGGGGCTCTTTTTGGTCTTGTTACGTTCAGTCACAAAATAGGACTGTATGATGTTCAAGGACCTATACCAGTTGTAAAGAATGTATTCATTCCCCCTGATGGGGAGAGCAGCTTATCGCTAGAACTTGAGGATGTCATGCCCTTGTTACAATTTTTGGCTCCGGTAGAAACTTGCAAGGATCGTATTGCTGCTGCACTTGAGACACTCAGACCAATTACTTCTTGGGAGAGATCAGCTGGAGCAGGTCAAGGGATGGATAGTGTGTTGATGGGTGGTAGGGGCTTTGGTACAGCTATGGAAGCTCTATTCAACTATCTAGGATCTGAATTTGGGAATACATTTGCATTAGCTAGGGTGTTTGCTTTCCTATCTGGTCCTCCTGATTATGGACGTGGACAATTGGATACAAGTAGATATGGTGAACAATATGCAAGTAAAAGGGTAGATGCTGATCGTGCTCTACTTCCTGAACAAACACCATTCTACAAAGACCTAGCCACCATTGCTGTCCAATCAGGTGTATGTGTAGATTTATTTGCAGTTACAAATGAGTACACAGATTTAGCATCCCTGAAGTTCCTTAGCATTGAAAGTGGCGGTTCACTGTTTTTGTATTCAAGCACTGATGATTCAACTCTTCCCCAAGACATGTTTCGAATGCTTAACCGGCCGTATGCATTCAATTGTGTCTTGAGATTGAGGACGTCAACTGAATTCAAACCTGGCAACTCTTTTGGTCACTTCTTTCCAGATCCACAGTACGAGAACCTTCAGCATATCATCTGCTGTGATTCATATGCAACATATGCATATGACTTTGAATTTGCAGATAACACTGGATTTTCCAGGCATTCTGGAGAGCAACCAGTGGTGCAAATTGCATTTCAGTACACAGTTGTTGTACCTCCCGAGGGACTGTCAAATTCAGAAATGTCATCTTCAAGTAGAGGCAAGCACACACTTCAGAGACGATTAAGGATCAGAACCATGCAATTTGGAACTGCCCACAATATCAATGAAATTTACGACAGTGTGGATCATGAAGTTGTTCTCTCATTGCTCGTTCACAAGGTAATTTTAGCCTCTCTGGAAGATGGAGTCAGAGAAGGGAGGGCATTGCTGCATGATTGGCTAGTAATTCTAACAGCACAATACAACGATGCCTTTAACCTTGTCCAATACAAAAACGGAAATAAGTCAATGAGTTCTCAGATTGATATCACGTTTTCACAATGTCCTCAACTTGAGCCTTTGCCTCGTTTAGTCTTTGCCTTACTCCGTAATCCCCTTCTCCGGTTTCATGAAGAAGGTGTTCATCCTGATTACAGAATCTACTTGCAATGCCTTTTCAGTGTGTTGGACCCGAGCTCTCTTCATTGCGGCATTTACCCAGCACTAATGTCATATTCAACACCGGATACACTGGCATATCCGCGTCATTCGTTGAGCCGTGCAGCATTGATAACAAGTGGTAGTCCGATATTTTTCCTAGATGCATATACCACTTTGATAGTCTTCTACTCATCAACAGCAGACCCGTCAATACCTTTCCCTCCACCTCAAGACTGTTTATTGAGGCAGACCATAAATAAAGTGAAGCAAGAAAGGAGCATCACACCAAAACTAGTGTTTATCCGAGGAGGACGAGACGATGCTACTGTCTTTGAGAACTATCTTATAGAAGAACAAGATGTGGACGGTAATGGTTTTGCTAGCGCCATGGGTTTCGTGTCTTTCCTCGATGATATTTCGCAGCGTGTCACTGAATACATGAAGTGA
Protein Sequence
- >AT2G27460.1
MAVRATVSRFPIDSDAQEASGLPWGLTVTPFAAKDENGIGPACGSNGHLLPRCENCYAYFNTYCELDQWAWNCSLCGTLNGLPSDAIARYSNPHSIPEMTSSFIDLEMPLDGSEEEMTQARPVYVAAIDISSSEEFLELTKSALLAALEALSPGALFGLVTFSHKIGLYDVQGPIPVVKNVFIPPDGESSLSLELEDVMPLLQFLAPVETCKDRIAAALETLRPITSWERSAGAGQGMDSVLMGGRGFGTAMEALFNYLGSEFGNTFALARVFAFLSGPPDYGRGQLDTSRYGEQYASKRVDADRALLPEQTPFYKDLATIAVQSGVCVDLFAVTNEYTDLASLKFLSIESGGSLFLYSSTDDSTLPQDMFRMLNRPYAFNCVLRLRTSTEFKPGNSFGHFFPDPQYENLQHIICCDSYATYAYDFEFADNTGFSRHSGEQPVVQIAFQYTVVVPPEGLSNSEMSSSSRGKHTLQRRLRIRTMQFGTAHNINEIYDSVDHEVVLSLLVHKVILASLEDGVREGRALLHDWLVILTAQYNDAFNLVQYKNGNKSMSSQIDITFSQCPQLEPLPRLVFALLRNPLLRFHEEGVHPDYRIYLQCLFSVLDPSSLHCGIYPALMSYSTPDTLAYPRHSLSRAALITSGSPIFFLDAYTTLIVFYSSTADPSIPFPPPQDCLLRQTINKVKQERSITPKLVFIRGGRDDATVFENYLIEEQDVDGNGFASAMGFVSFLDDISQRVTEYMK