Information report for AT2G27380
Gene Details
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Functional Descriptions
- PO:0000200 — micropylar endosperm — endosperma micrópilar (Spanish, exact), portion of micropylar endosperm (exact), 珠孔内胚乳 (Japanese, exact), micropylar region (related)
- GO:0009845 — acts upstream of or within — seed germination
- GO:0009827 — acts upstream of or within — plant-type cell wall modification
- GO:0005199 — enables — structural constituent of cell wall
Functional Keywords
Literature and News
- The Arabidopsis AtEPR1 extensin-like gene is specifically expressed in endosperm during seed germination. DOI: 10.1046/j.1365-313x.2000.00829.x ; PMID: 10972890
- Using genomic resources to guide research directions. The arabinogalactan protein gene family as a test case. DOI: 10.1104/pp.003459 ; PMID: 12177459
- Arabidopsis ABA INSENSITIVE4 regulates lipid mobilization in the embryo and reveals repression of seed germination by the endosperm. DOI: 10.1105/tpc.106.041277 ; PMID: 16844907
- Uncovering the molecular signature underlying the light intensity-dependent root development in Arabidopsis thaliana. DOI: 10.1186/s12864-019-5933-5 ; PMID: 31325959
Gene Resources
- UniProt: A0A654EWN5
- EMBL: CACRSJ010000105
- AlphaFoldDB: A0A654EWN5
- EnsemblPlants: AT2G27380.1
- Gramene: AT2G27380.1
- KEGG: ath:AT2G27380
- Orthologous matrix: ASPPVQW
- ExpressionAtlas: AT2G27380
- InterPro: IPR051308
- PANTHER: PTHR34629, PTHR34629:SF1
- SWISS-MODEL: A0A654EWN5
Sequences
cDNA Sequence
- >AT2G27380.1
ATGAGAGTCCCACTAATAGATTTCTTGAGATTCTTAGTACTCATTCTTTCTCTTAGTGGTGCTTCAGTTGCTGCAGATGCAACGGTGAAGCAAAACTTTAATAAGTATGAGACTGATAGTGGTCACGCACATCCGCCACCAATTTATGGTGCCCCACCCAGCTACACAACACCACCACCACCAATTTACAGTCCTCCCATATATCCACCACCAATACAAAAGCCTCCGACTTATAGTCCTCCCATATATCCACCACCAATACAAAAACCTCCCACCCCAACTTATAGTCCTCCCATATATCCACCACCAATACAAAAGCCCCCGACACCAACTTACAGTCCTCCCATTTATCCACCACCAATACAAAAGCCTCCGACCCCAACTTATAGTCCTCCCATATATCCACCACCAATACAAAAGCCTCCGACACCAAGTTATAGTCCTCCTGTTAAACCACCTCCGGTACAAATGCCTCCTACACCAACTTATAGTCCCCCTATAAAACCACCACCAGTACATAAGCCTCCGACACCAACTTACAGCCCCCCTATAAAACCACCAGTGCATAAGCCTCCGACACCAATTTACAGTCCTCCAATCAAGCCACCACCAGTGCACAAGCCTCCGACACCAATTTATAGTCCTCCGATCAAACCACCACCAGTGCACAAGCCTCCAACACCAACTTATAGTCCCCCGGTCAAGCCACCGCCAGTGCATAAACCTCCAACACCAATATATAGTCCTCCAATCAAGCCACCACCAGTGCACAAGCCTCCAACACCAATTTACAGTCCCCCTGTTAAACCACCACCTGTGCAAACGCCTCCAACACCAATATACAGTCCTCCTGTAAAGCCACCACCAGTGCATAAGCCTCCAACACCGACTTACAGCCCTCCAGTAAAATCACCTCCCGTTCAGAAGCCTCCTACCCCTACTTATAGTCCTCCGATTAAGCCACCACCAGTGCAAAAGCCTCCAACACCAACTTATAGTCCACCAATTAAACCGCCACCAGTGAAGCCTCCAACTCCAATATACAGTCCACCTGTGAAGCCACCACCAGTACATAAGCCTCCTACACCAATTTATAGCCCACCTGTCAAGCCACCACCAGTGCATAAGCCTCCAACACCAATTTACAGCCCTCCAGTAAAACCACCTCCCATTCAGAAGCCTCCTACCCCTACTTATAGTCCTCCGATTAAGCCACCACCACTTCAAAAGCCTCCAACACCAACTTATAGTCCACCAATTAAACTGCCACCAGTGAAGCCTCCAACTCCAATATACAGTCCACCTGTGAAGCCACCACCAGTACATAAGCCTCCTACACCAATTTATAGTCCACCTGTCAAGCCACCACCAGTGCATAAGCCTCCAACACCAACTTATAGTCCACCAATTAAACCCCCACCAGTGAAGCCCCCAACACCCACATACAGTCCACCTGTTCAGCCACCACCAGTGCAAAAACCGCCAACACCGACTTATAGTCCACCTGTCAAGCCACCGCCAATACAAAAACCACCGACGCCGACTTACAGTCCACCTATTAAACCACCACCAGTGAAGCCTCCGACACCAACATATAGTCCTCCAATCAAGCCACCACCAGTTCATAAGCCTCCGACACCAACTTACAGTCCACCTATCAAGCCACCTCCAATTCATAAACCTCCGACACCAACTTACAGTCCACCTATCAAGCCACCACCAGTGCATAAGCCTCCGACACCAACTTACAGTCCACCTATCAAGCCACCACCAGTGCATAAGCCTCCGACACCAACTTACAGTCCACCTATCAAGCCACCACCAGTGCATAAGCCTCCGACACCAACTTACAGTCCACCTATCAAGCCACCACCAGTGCATAAGCCTCCGACACCAACATACAGTCCTCCTATCAAGCCACCACCAGTTCATAAGCCTCCGACACCAACATACAGTCCACCTATCAAGCCACCACCAGTGCAAAAGCCTCCTACCCCAACTTATAGCCCTCCAGTAAAGCCACCACCAGTACAATTGCCTCCAACCCCAACTTATAGCCCTCCCGTAAAACCACCACCAGTACAAGTGCCTCCAACCCCAACTTATAGCCCTCCCGTAAAACCACCACCAGTACAAGTACCTCCAACACCAACTTATAGCCCTCCCATAAAACCACCACCGGTACAAGTGCCTCCAACACCAACTACTCCATCACCTCCCCAAGGTGGATACGGTACTCCTCCTCCATATGCATATCTATCGCATCCTATAGACATAAGGAACTAGGTAAACAAGATACAGTACATATATTTCCTCAAGGATCGCCAAATAGGCTTTCTAGCACAAGAGAGATGTATGTTAAAG
CDS Sequence
- >AT2G27380.1
ATGAGAGTCCCACTAATAGATTTCTTGAGATTCTTAGTACTCATTCTTTCTCTTAGTGGTGCTTCAGTTGCTGCAGATGCAACGGTGAAGCAAAACTTTAATAAGTATGAGACTGATAGTGGTCACGCACATCCGCCACCAATTTATGGTGCCCCACCCAGCTACACAACACCACCACCACCAATTTACAGTCCTCCCATATATCCACCACCAATACAAAAGCCTCCGACTTATAGTCCTCCCATATATCCACCACCAATACAAAAACCTCCCACCCCAACTTATAGTCCTCCCATATATCCACCACCAATACAAAAGCCCCCGACACCAACTTACAGTCCTCCCATTTATCCACCACCAATACAAAAGCCTCCGACCCCAACTTATAGTCCTCCCATATATCCACCACCAATACAAAAGCCTCCGACACCAAGTTATAGTCCTCCTGTTAAACCACCTCCGGTACAAATGCCTCCTACACCAACTTATAGTCCCCCTATAAAACCACCACCAGTACATAAGCCTCCGACACCAACTTACAGCCCCCCTATAAAACCACCAGTGCATAAGCCTCCGACACCAATTTACAGTCCTCCAATCAAGCCACCACCAGTGCACAAGCCTCCGACACCAATTTATAGTCCTCCGATCAAACCACCACCAGTGCACAAGCCTCCAACACCAACTTATAGTCCCCCGGTCAAGCCACCGCCAGTGCATAAACCTCCAACACCAATATATAGTCCTCCAATCAAGCCACCACCAGTGCACAAGCCTCCAACACCAATTTACAGTCCCCCTGTTAAACCACCACCTGTGCAAACGCCTCCAACACCAATATACAGTCCTCCTGTAAAGCCACCACCAGTGCATAAGCCTCCAACACCGACTTACAGCCCTCCAGTAAAATCACCTCCCGTTCAGAAGCCTCCTACCCCTACTTATAGTCCTCCGATTAAGCCACCACCAGTGCAAAAGCCTCCAACACCAACTTATAGTCCACCAATTAAACCGCCACCAGTGAAGCCTCCAACTCCAATATACAGTCCACCTGTGAAGCCACCACCAGTACATAAGCCTCCTACACCAATTTATAGCCCACCTGTCAAGCCACCACCAGTGCATAAGCCTCCAACACCAATTTACAGCCCTCCAGTAAAACCACCTCCCATTCAGAAGCCTCCTACCCCTACTTATAGTCCTCCGATTAAGCCACCACCACTTCAAAAGCCTCCAACACCAACTTATAGTCCACCAATTAAACTGCCACCAGTGAAGCCTCCAACTCCAATATACAGTCCACCTGTGAAGCCACCACCAGTACATAAGCCTCCTACACCAATTTATAGTCCACCTGTCAAGCCACCACCAGTGCATAAGCCTCCAACACCAACTTATAGTCCACCAATTAAACCCCCACCAGTGAAGCCCCCAACACCCACATACAGTCCACCTGTTCAGCCACCACCAGTGCAAAAACCGCCAACACCGACTTATAGTCCACCTGTCAAGCCACCGCCAATACAAAAACCACCGACGCCGACTTACAGTCCACCTATTAAACCACCACCAGTGAAGCCTCCGACACCAACATATAGTCCTCCAATCAAGCCACCACCAGTTCATAAGCCTCCGACACCAACTTACAGTCCACCTATCAAGCCACCTCCAATTCATAAACCTCCGACACCAACTTACAGTCCACCTATCAAGCCACCACCAGTGCATAAGCCTCCGACACCAACTTACAGTCCACCTATCAAGCCACCACCAGTGCATAAGCCTCCGACACCAACTTACAGTCCACCTATCAAGCCACCACCAGTGCATAAGCCTCCGACACCAACTTACAGTCCACCTATCAAGCCACCACCAGTGCATAAGCCTCCGACACCAACATACAGTCCTCCTATCAAGCCACCACCAGTTCATAAGCCTCCGACACCAACATACAGTCCACCTATCAAGCCACCACCAGTGCAAAAGCCTCCTACCCCAACTTATAGCCCTCCAGTAAAGCCACCACCAGTACAATTGCCTCCAACCCCAACTTATAGCCCTCCCGTAAAACCACCACCAGTACAAGTGCCTCCAACCCCAACTTATAGCCCTCCCGTAAAACCACCACCAGTACAAGTACCTCCAACACCAACTTATAGCCCTCCCATAAAACCACCACCGGTACAAGTGCCTCCAACACCAACTACTCCATCACCTCCCCAAGGTGGATACGGTACTCCTCCTCCATATGCATATCTATCGCATCCTATAGACATAAGGAACTAG
Protein Sequence
- >AT2G27380.1
MRVPLIDFLRFLVLILSLSGASVAADATVKQNFNKYETDSGHAHPPPIYGAPPSYTTPPPPIYSPPIYPPPIQKPPTYSPPIYPPPIQKPPTPTYSPPIYPPPIQKPPTPTYSPPIYPPPIQKPPTPTYSPPIYPPPIQKPPTPSYSPPVKPPPVQMPPTPTYSPPIKPPPVHKPPTPTYSPPIKPPVHKPPTPIYSPPIKPPPVHKPPTPIYSPPIKPPPVHKPPTPTYSPPVKPPPVHKPPTPIYSPPIKPPPVHKPPTPIYSPPVKPPPVQTPPTPIYSPPVKPPPVHKPPTPTYSPPVKSPPVQKPPTPTYSPPIKPPPVQKPPTPTYSPPIKPPPVKPPTPIYSPPVKPPPVHKPPTPIYSPPVKPPPVHKPPTPIYSPPVKPPPIQKPPTPTYSPPIKPPPLQKPPTPTYSPPIKLPPVKPPTPIYSPPVKPPPVHKPPTPIYSPPVKPPPVHKPPTPTYSPPIKPPPVKPPTPTYSPPVQPPPVQKPPTPTYSPPVKPPPIQKPPTPTYSPPIKPPPVKPPTPTYSPPIKPPPVHKPPTPTYSPPIKPPPIHKPPTPTYSPPIKPPPVHKPPTPTYSPPIKPPPVHKPPTPTYSPPIKPPPVHKPPTPTYSPPIKPPPVHKPPTPTYSPPIKPPPVHKPPTPTYSPPIKPPPVQKPPTPTYSPPVKPPPVQLPPTPTYSPPVKPPPVQVPPTPTYSPPVKPPPVQVPPTPTYSPPIKPPPVQVPPTPTTPSPPQGGYGTPPPYAYLSHPIDIRN