Information report for AT2G27220
Gene Details
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Functional Descriptions
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- GO:0005515 — enables — protein binding
- GO:0003700 — enables — DNA-binding transcription factor activity
- GO:0006357 — involved in — regulation of transcription by RNA polymerase II
- GO:0000981 — enables — DNA-binding transcription factor activity, RNA polymerase II-specific
- GO:0005634 — located in — nucleus
- GO:0000978 — enables — RNA polymerase II cis-regulatory region sequence-specific DNA binding
Functional Keywords
Literature and News
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- VAAMANA–a BEL1-like homeodomain protein, interacts with KNOX proteins BP and STM and regulates inflorescence stem growth in Arabidopsis. DOI: 10.1016/j.gene.2003.12.033 ; PMID: 15019989
- Competence to respond to floral inductive signals requires the homeobox genes PENNYWISE and POUND-FOOLISH. DOI: 10.1016/j.cub.2004.04.032 ; PMID: 15120075
- A central role of Arabidopsis thaliana ovate family proteins in networking and subcellular localization of 3-aa loop extension homeodomain proteins. DOI: 10.1073/pnas.0501181102 ; PMID: 15781858
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis. DOI: 10.1093/molbev/msj051 ; PMID: 16280546
Gene Resources
- UniProt: A0A178VX84
- EMBL: CACRSJ010000105, LUHQ01000002
- AlphaFoldDB: A0A178VX84
- EnsemblPlants: AT2G27220.1, AT2G27220.3
- Gramene: AT2G27220.1, AT2G27220.3
- KEGG: ath:AT2G27220
- ExpressionAtlas: AT2G27220
- InterPro: IPR001356, IPR006563, IPR008422
- PANTHER: PTHR11850
- SUPFAM: SSF46689
- PROSITE: PS00027, PS50071
- Gene3D: 1.10.10.60
- SWISS-MODEL: A0A178VX84
- Conserved Domain Database: cd00086
Homologs
- Brassica napus BnaA03G0534800ZS, BnaA01G0048800ZS
- Brassica oleracea Bo7g115960, Bo1g008560
- Brassica rapa Bra037031, Bra011403
- Manihot esculenta MANES_16G079300
- Oryza sativa OsBIHD1, OsBLH6, OsHB86, SH5;RI, qSH1;RIL1, OsHB22
- Populus trichocarpa POPTR_006G230700v3
Sequences
cDNA Sequence
- >AT2G27220.3
TTTTGCTTACCTTTTCTTCCTAAGCTCTTGGATATTATTAATGTTTTAGATCGATTTATATTATAATTTGATATTTTCTTGAATTGCAAGTTTTGTTGCTTAATTGTCAGAATAATGGCTGCTTTCTTTCTTGGAGAATCTGAAATGAGAGAACACTCTTCTGATCTTTTTATGATGACTCTGAATCCGTTTCGCGAGCAGACAACGACCACTAATGCTCATGACGATCACTTCTACAACTTGTGCTTTGGTTCCCAACAATATAGACCTCGAGATGAAGTAGGTCATATAGAACAAGGAAATTCTTCCATCTCCACTTTTTCAAACGGAGGAGTCTTCAGGGCTTTGGCTCCGATCTACTTGAAAGCGGCTCAAGAATTACTCAATGAGATTGTCAATGTTGGAAACGGTAGCCACGGCGCAAAACAAGAGCGACCGGTGAGTAAAGAGTCCACGATTTATGGAGTTGAGGACATCAATGGTGGCTATAAGCCTGGCGTAGCTGCTTTGCAAATGAAGAAAGCAAAACTCATCTCCATGGGTGAAATGGTGGAACAGAGATACAAGCAATACCATGACCAAATGCAGACTATAATCTCATCGTTTGAGCAAGCTGCGGGTTTAGGCTCAGCAAACTCATACACACATATGGCGTTACAAACAATATCAAAGCAGTTTCGTGCTGTAAAAGACATGATAAGTTTGCAAATCAAGCAAATAAACAAGCTCTTGGGACAAAAGGAATTTGACGAGCAGCTTAAGAAGTTGGGAAAGATGGCACATCACCATTCAAATGCTTGGAGACCGCAGAGAGGTTTGCCCGAAAAAGCTGTTTCCGTTCTACGCTCTTGGCTCTTTGAGCATTTTCTTCATCCATATCCGAGGGATTTGGATAAGGTAATGCTTGCCAAACAGACTGGCCTTACTAAGAGTCAGGTGTCAAATTGGTTCATTAATGCTCGAGTTCGAATGTGGAAGCCACTGGTGGAGGAACTTTATTCGGAAGAAATGGATATTGAAGAAAGCAGAAAAGGAAGTGACCGGTATAGTACCAAAGGTTCATCTTCAAAGCAACCGTACAATAATACAACTTCAAATGAATCTTCGAACACGATCCTACCCGCCTTTCGTCAAGGATTCACTGAAACTGAAACCCCTAGGCAAAATTCATCCTCAAGTTGCAGCGTAGTCATGAGGTTCACGAAGCAACACATGAATCAAGCGAACTTCATCAATTTCAACGGAGGGTTCGAAAACTATCACACAATGGATGGAAACAGCGTCTCCCTTTCCCTCGGCCTGCCTCATTCTTGTGACCAAACCTTTAATAACATTCATTTTGAGTCAACAAGTCATGGAACTGAGAACTCGGCCATATATTCATCTTCAACTTATCAAATCATGGATTAGAAATAATTAGTGGGGATGATATATTTTCTGCTTGTTGCTTACGTATATTCTGTGTATAGTTTTGGCCCTTGGATGGTTTCGTATGGGTTGATGTGTGTAGATTGATAGAGAGGAGATGATTAAGTAAAGGTTATGATAAAAATGTAGATAAC - >AT2G27220.2
TTTTGCTTACCTTTTCTTCCTAAGCTCTTGGATATTATTAATGTTTTAGATCGATTTATATTATAATTTGATATTTTCTTGAATTGCAAGTTTTGTTGCTTAATTGTCAGAATAATGGCTGCTTTCTTTCTTGGAGAATCTGAAATGAGAGAACACTCTTCTGATCTTTTTATGATGACTCTGAATCCGTTTCGCGAGCAGACAACGACCACTAATGCTCATGACGATCACTTCTACAACTTGTGCTTTGGTTCCCAACAATATAGACCTCGAGATGAAGTAGGTCATATAGAACAAGGAAATTCTTCCATCTCCACTTTTTCAAACGGAGGAGTCTTCAGGGCTTTGGCTCCGATCTACTTGAAAGCGGCTCAAGAATTACTCAATGAGATTGTCAATGTTGGAAACGGTAGCCACGGCGCAAAACAAGAGCGACCGGTGAGTAAAGAGTCCACGATTTATGGAGTTGAGGACATCAATGGTGGCTATAAGCCTGGCGTAGCTGCTTTGCAAATGAAGAAAGCAAAACTCATCTCCATGGGTGAAATGGTGGAACAGAGATACAAGCAATACCATGACCAAATGCAGACTATAATCTCATCGTTTGAGCAAGCTGCGGGTTTAGGCTCAGCAAACTCATACACACATATGGCGTTACAAACAATATCAAAGCAGTTTCGTGCTGTAAAAGACATGATAAGTTTGCAAATCAAGCAAATAAACAAGCTCTTGGGACAAAAGGAATTTGACGAGCAGCTTAAGAAGTTGGGAAAGATGGCACATCACCATTCAAATGCTTGGAGACCGCAGAGAGGTTTGCCCGAAAAAGCTGTTTCCGTTCTACGCTCTTGGCTCTTTGAGCATTTTCTTCATCCATATCCGAGGGATTTGGATAAGGTAATGCTTGCCAAACAGACTGGCCTTACTAAGAGTCAGGTGTCAAATTGGTTCATTAATGCTCGAGTTCGAATGTGGAAGCCACTGGTGGAGGAACTTTATTCGGAAGAAATGGATATTGAAGAAAGCAGAAAAGGAAGTGACCGGTATAGTACCAAAGGTTCATCTTCAAAGCAACCGTACAATAATACAACTTCAAATGAATCTTCGAACACGATCCTACCCGCCTTTCGTCAAGGATTCACTGAAACTGAAACCCCTAGGCAAAATTCATCCTCAAGTTGCAGCGTAGTCATGAGGTTCACGAAGCAACACATGAATCAAGCGAACTTCATCAATTTCAACGGAGGGTTCGAAAACTATCACACAATGGATGGAAACAGCGTCTCCCTTTCCCTCGGCCTGCCTCATTCTTGTGACCAAACCTTTAATAACATTCATTTTGAGTCAACAAGTCATGGAACTGAGAACTCGGCCATATATTCATCTTCAACTTATCAAATCATGGATTAGAAATAATTAGTGGGGATGATATATTTTCTGCTTGTTGCTTACGTATATTCTGTGTATAGTTTTGGCCCTTGGATGGTTTCGTATGGGTTGATGTGTGTAGATTGATAGAGAGGAGATGATTAAGTAAAGGTTATGATAAAAATGTAGATAAC - >AT2G27220.1
TTTTGCTTACCTTTTCTTCCTAAGCTCTTGGATATTATTAATGTTTTAGATCGATTTATATTATAATTTGATATTTTCTTGAATTGCAAGTTTTGTTGCTTAATTGTCAGAATAATGGCTGCTTTCTTTCTTGGAGAATCTGAAATGAGAGAACACTCTTCTGATCTTTTTATGATGACTCTGAATCCGTTTCGCGAGCAGACAACGACCACTAATGCTCATGACGATCACTTCTACAACTTGTGCTTTGGTTCCCAACAATATAGACCTCGAGATGAAGTAGGTCATATAGAACAAGGAAATTCTTCCATCTCCACTTTTTCAAACGGAGGAGTCTTCAGGGCTTTGGCTCCGATCTACTTGAAAGCGGCTCAAGAATTACTCAATGAGATTGTCAATGTTGGAAACGGTAGCCACGGCGCAAAACAAGAGCGACCGGTGAGTAAAGAGTCCACGATTTATGGAGTTGAGGACATCAATGGTGGCTATAAGCCTGGCGTAGCTGCTTTGCAAATGAAGAAAGCAAAACTCATCTCCATGGGTGAAATGGTGGAACAGAGATACAAGCAATACCATGACCAAATGCAGACTATAATCTCATCGTTTGAGCAAGCTGCGGGTTTAGGCTCAGCAAACTCATACACACATATGGCGTTACAAACAATATCAAAGCAGTTTCGTGCTGTAAAAGACATGATAAGTTTGCAAATCAAGCAAATAAACAAGCTCTTGGGACAAAAGGAATTTGACGAGCAGCTTAAGAAGTTGGGAAAGATGGCACATCACCATTCAAATGCTTGGAGACCGCAGAGAGGTTTGCCCGAAAAAGCTGTTTCCGTTCTACGCTCTTGGCTCTTTGAGCATTTTCTTCATCCATATCCGAGGGATTTGGATAAGGTAATGCTTGCCAAACAGACTGGCCTTACTAAGAGTCAGGTGTCAAATTGGTTCATTAATGCTCGAGTTCGAATGTGGAAGCCACTGGTGGAGGAACTTTATTCGGAAGAAATGGATATTGAAGAAAGCAGAAAAGGAAGTGACCGGTATAGTACCAAAGGTTCATCTTCAAAGCAACCGTACAATAATACAACTTCAAATGAATCTTCGAACACGATCCTACCCGCCTTTCGTCAAGGATTCACTGAAACTGAAACCCCTAGGCAAAATTCATCCTCAAGTTGCAGCGTAGTCATGAGGTTCACGAAGCAACACATGAATCAAGCGAACTTCATCAATTTCAACGGAGGGTTCGAAAACTATCACACAATGGATGGAAACAGCGTCTCCCTTTCCCTCGGCCTGCCTCATTCTTGTGACCAAACCTTTAATAACATTCATTTTGAGTCAACAAGTCATGGAACTGAGAACTCGGCCATATATTCATCTTCAACTTATCAAATCATGGATTAGAAATAATTAGTGGGGATGATATATTTTCTGCTTGTTGCTTACGTATATTCTGTGTATAGTTTTGGCCCTTGGATGGTTTCGTATGGGTTGATGTGTGTAGATTGATAGAGAGGAGATGATTAAGTAAAGGTTATGATAAAAATGTAGATAAC
CDS Sequence
- >AT2G27220.3
ATGGCTGCTTTCTTTCTTGGAGAATCTGAAATGAGAGAACACTCTTCTGATCTTTTTATGATGACTCTGAATCCGTTTCGCGAGCAGACAACGACCACTAATGCTCATGACGATCACTTCTACAACTTGTGCTTTGGTTCCCAACAATATAGACCTCGAGATGAAGTAGGTCATATAGAACAAGGAAATTCTTCCATCTCCACTTTTTCAAACGGAGGAGTCTTCAGGGCTTTGGCTCCGATCTACTTGAAAGCGGCTCAAGAATTACTCAATGAGATTGTCAATGTTGGAAACGGTAGCCACGGCGCAAAACAAGAGCGACCGGTGAGTAAAGAGTCCACGATTTATGGAGTTGAGGACATCAATGGTGGCTATAAGCCTGGCGTAGCTGCTTTGCAAATGAAGAAAGCAAAACTCATCTCCATGGGTGAAATGGTGGAACAGAGATACAAGCAATACCATGACCAAATGCAGACTATAATCTCATCGTTTGAGCAAGCTGCGGGTTTAGGCTCAGCAAACTCATACACACATATGGCGTTACAAACAATATCAAAGCAGTTTCGTGCTGTAAAAGACATGATAAGTTTGCAAATCAAGCAAATAAACAAGCTCTTGGGACAAAAGGAATTTGACGAGCAGCTTAAGAAGTTGGGAAAGATGGCACATCACCATTCAAATGCTTGGAGACCGCAGAGAGGTTTGCCCGAAAAAGCTGTTTCCGTTCTACGCTCTTGGCTCTTTGAGCATTTTCTTCATCCATATCCGAGGGATTTGGATAAGGTAATGCTTGCCAAACAGACTGGCCTTACTAAGAGTCAGGTGTCAAATTGGTTCATTAATGCTCGAGTTCGAATGTGGAAGCCACTGGTGGAGGAACTTTATTCGGAAGAAATGGATATTGAAGAAAGCAGAAAAGGAAGTGACCGGTATAGTACCAAAGGTTCATCTTCAAAGCAACCGTACAATAATACAACTTCAAATGAATCTTCGAACACGATCCTACCCGCCTTTCGTCAAGGATTCACTGAAACTGAAACCCCTAGGCAAAATTCATCCTCAAGTTGCAGCGTAGTCATGAGGTTCACGAAGCAACACATGAATCAAGCGAACTTCATCAATTTCAACGGAGGGTTCGAAAACTATCACACAATGGATGGAAACAGCGTCTCCCTTTCCCTCGGCCTGCCTCATTCTTGTGACCAAACCTTTAATAACATTCATTTTGAGTCAACAAGTCATGGAACTGAGAACTCGGCCATATATTCATCTTCAACTTATCAAATCATGGATTAG - >AT2G27220.2
ATGGCTGCTTTCTTTCTTGGAGAATCTGAAATGAGAGAACACTCTTCTGATCTTTTTATGATGACTCTGAATCCGTTTCGCGAGCAGACAACGACCACTAATGCTCATGACGATCACTTCTACAACTTGTGCTTTGGTTCCCAACAATATAGACCTCGAGATGAAGTAGGTCATATAGAACAAGGAAATTCTTCCATCTCCACTTTTTCAAACGGAGGAGTCTTCAGGGCTTTGGCTCCGATCTACTTGAAAGCGGCTCAAGAATTACTCAATGAGATTGTCAATGTTGGAAACGGTAGCCACGGCGCAAAACAAGAGCGACCGGTGAGTAAAGAGTCCACGATTTATGGAGTTGAGGACATCAATGGTGGCTATAAGCCTGGCGTAGCTGCTTTGCAAATGAAGAAAGCAAAACTCATCTCCATGGGTGAAATGGTGGAACAGAGATACAAGCAATACCATGACCAAATGCAGACTATAATCTCATCGTTTGAGCAAGCTGCGGGTTTAGGCTCAGCAAACTCATACACACATATGGCGTTACAAACAATATCAAAGCAGTTTCGTGCTGTAAAAGACATGATAAGTTTGCAAATCAAGCAAATAAACAAGCTCTTGGGACAAAAGGAATTTGACGAGCAGCTTAAGAAGTTGGGAAAGATGGCACATCACCATTCAAATGCTTGGAGACCGCAGAGAGGTTTGCCCGAAAAAGCTGTTTCCGTTCTACGCTCTTGGCTCTTTGAGCATTTTCTTCATCCATATCCGAGGGATTTGGATAAGGTAATGCTTGCCAAACAGACTGGCCTTACTAAGAGTCAGGTGTCAAATTGGTTCATTAATGCTCGAGTTCGAATGTGGAAGCCACTGGTGGAGGAACTTTATTCGGAAGAAATGGATATTGAAGAAAGCAGAAAAGGAAGTGACCGGTATAGTACCAAAGGTTCATCTTCAAAGCAACCGTACAATAATACAACTTCAAATGAATCTTCGAACACGATCCTACCCGCCTTTCGTCAAGGATTCACTGAAACTGAAACCCCTAGGCAAAATTCATCCTCAAGTTGCAGCGTAGTCATGAGGTTCACGAAGCAACACATGAATCAAGCGAACTTCATCAATTTCAACGGAGGGTTCGAAAACTATCACACAATGGATGGAAACAGCGTCTCCCTTTCCCTCGGCCTGCCTCATTCTTGTGACCAAACCTTTAATAACATTCATTTTGAGTCAACAAGTCATGGAACTGAGAACTCGGCCATATATTCATCTTCAACTTATCAAATCATGGATTAG - >AT2G27220.1
ATGGCTGCTTTCTTTCTTGGAGAATCTGAAATGAGAGAACACTCTTCTGATCTTTTTATGATGACTCTGAATCCGTTTCGCGAGCAGACAACGACCACTAATGCTCATGACGATCACTTCTACAACTTGTGCTTTGGTTCCCAACAATATAGACCTCGAGATGAAGTAGGTCATATAGAACAAGGAAATTCTTCCATCTCCACTTTTTCAAACGGAGGAGTCTTCAGGGCTTTGGCTCCGATCTACTTGAAAGCGGCTCAAGAATTACTCAATGAGATTGTCAATGTTGGAAACGGTAGCCACGGCGCAAAACAAGAGCGACCGGTGAGTAAAGAGTCCACGATTTATGGAGTTGAGGACATCAATGGTGGCTATAAGCCTGGCGTAGCTGCTTTGCAAATGAAGAAAGCAAAACTCATCTCCATGGGTGAAATGGTGGAACAGAGATACAAGCAATACCATGACCAAATGCAGACTATAATCTCATCGTTTGAGCAAGCTGCGGGTTTAGGCTCAGCAAACTCATACACACATATGGCGTTACAAACAATATCAAAGCAGTTTCGTGCTGTAAAAGACATGATAAGTTTGCAAATCAAGCAAATAAACAAGCTCTTGGGACAAAAGGAATTTGACGAGCAGCTTAAGAAGTTGGGAAAGATGGCACATCACCATTCAAATGCTTGGAGACCGCAGAGAGGTTTGCCCGAAAAAGCTGTTTCCGTTCTACGCTCTTGGCTCTTTGAGCATTTTCTTCATCCATATCCGAGGGATTTGGATAAGGTAATGCTTGCCAAACAGACTGGCCTTACTAAGAGTCAGGTGTCAAATTGGTTCATTAATGCTCGAGTTCGAATGTGGAAGCCACTGGTGGAGGAACTTTATTCGGAAGAAATGGATATTGAAGAAAGCAGAAAAGGAAGTGACCGGTATAGTACCAAAGGTTCATCTTCAAAGCAACCGTACAATAATACAACTTCAAATGAATCTTCGAACACGATCCTACCCGCCTTTCGTCAAGGATTCACTGAAACTGAAACCCCTAGGCAAAATTCATCCTCAAGTTGCAGCGTAGTCATGAGGTTCACGAAGCAACACATGAATCAAGCGAACTTCATCAATTTCAACGGAGGGTTCGAAAACTATCACACAATGGATGGAAACAGCGTCTCCCTTTCCCTCGGCCTGCCTCATTCTTGTGACCAAACCTTTAATAACATTCATTTTGAGTCAACAAGTCATGGAACTGAGAACTCGGCCATATATTCATCTTCAACTTATCAAATCATGGATTAG
Protein Sequence
- >AT2G27220.3
MAAFFLGESEMREHSSDLFMMTLNPFREQTTTTNAHDDHFYNLCFGSQQYRPRDEVGHIEQGNSSISTFSNGGVFRALAPIYLKAAQELLNEIVNVGNGSHGAKQERPVSKESTIYGVEDINGGYKPGVAALQMKKAKLISMGEMVEQRYKQYHDQMQTIISSFEQAAGLGSANSYTHMALQTISKQFRAVKDMISLQIKQINKLLGQKEFDEQLKKLGKMAHHHSNAWRPQRGLPEKAVSVLRSWLFEHFLHPYPRDLDKVMLAKQTGLTKSQVSNWFINARVRMWKPLVEELYSEEMDIEESRKGSDRYSTKGSSSKQPYNNTTSNESSNTILPAFRQGFTETETPRQNSSSSCSVVMRFTKQHMNQANFINFNGGFENYHTMDGNSVSLSLGLPHSCDQTFNNIHFESTSHGTENSAIYSSSTYQIMD - >AT2G27220.2
MAAFFLGESEMREHSSDLFMMTLNPFREQTTTTNAHDDHFYNLCFGSQQYRPRDEVGHIEQGNSSISTFSNGGVFRALAPIYLKAAQELLNEIVNVGNGSHGAKQERPVSKESTIYGVEDINGGYKPGVAALQMKKAKLISMGEMVEQRYKQYHDQMQTIISSFEQAAGLGSANSYTHMALQTISKQFRAVKDMISLQIKQINKLLGQKEFDEQLKKLGKMAHHHSNAWRPQRGLPEKAVSVLRSWLFEHFLHPYPRDLDKVMLAKQTGLTKSQVSNWFINARVRMWKPLVEELYSEEMDIEESRKGSDRYSTKGSSSKQPYNNTTSNESSNTILPAFRQGFTETETPRQNSSSSCSVVMRFTKQHMNQANFINFNGGFENYHTMDGNSVSLSLGLPHSCDQTFNNIHFESTSHGTENSAIYSSSTYQIMD - >AT2G27220.1
MAAFFLGESEMREHSSDLFMMTLNPFREQTTTTNAHDDHFYNLCFGSQQYRPRDEVGHIEQGNSSISTFSNGGVFRALAPIYLKAAQELLNEIVNVGNGSHGAKQERPVSKESTIYGVEDINGGYKPGVAALQMKKAKLISMGEMVEQRYKQYHDQMQTIISSFEQAAGLGSANSYTHMALQTISKQFRAVKDMISLQIKQINKLLGQKEFDEQLKKLGKMAHHHSNAWRPQRGLPEKAVSVLRSWLFEHFLHPYPRDLDKVMLAKQTGLTKSQVSNWFINARVRMWKPLVEELYSEEMDIEESRKGSDRYSTKGSSSKQPYNNTTSNESSNTILPAFRQGFTETETPRQNSSSSCSVVMRFTKQHMNQANFINFNGGFENYHTMDGNSVSLSLGLPHSCDQTFNNIHFESTSHGTENSAIYSSSTYQIMD