Information report for AT2G27200
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- GO:0003924 — enables — GTPase activity
- GO:0005829 — is active in — cytosol
- GO:0008150 — involved in — biological_process
- GO:0005829 — located in — cytosol
- GO:0005634 — located in — nucleus
Functional Keywords
Literature and News
- Cell cycle-regulated gene expression in Arabidopsis. DOI: 10.1074/jbc.M207570200 ; PMID: 12169696
- Arabidopsis SHORT INTEGUMENTS 2 is a mitochondrial DAR GTPase. DOI: 10.1534/genetics.106.060657 ; PMID: 16849600
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- The 60S associated ribosome biogenesis factor LSG1-2 is required for 40S maturation in Arabidopsis thaliana. DOI: 10.1111/tpj.12703 ; PMID: 25319368
- The Arabidopsis gene DIG6 encodes a large 60S subunit nuclear export GTPase 1 that is involved in ribosome biogenesis and affects multiple auxin-regulated development processes. DOI: 10.1093/jxb/erv391 ; PMID: 26272902
- Endogenous Arabidopsis messenger RNAs transported to distant tissues. DOI: 10.1038/nplants.2015.25 ; PMID: 27247031
Gene Resources
- UniProt: A0A178VYZ8
- EMBL: LUHQ01000002
- AlphaFoldDB: A0A178VYZ8
- EnsemblPlants: AT2G27200.1
- Gramene: AT2G27200.1
- KEGG: ath:AT2G27200
- Orthologous matrix: VNKADMM
- ExpressionAtlas: AT2G27200
- InterPro: IPR006073, IPR023179, IPR027417
- PANTHER: PTHR45709, PTHR45709:SF4
- SUPFAM: SSF52540
- PROSITE: PS51721
- Gene3D: 1.10.1580.10, 3.40.50.300
- SWISS-MODEL: A0A178VYZ8
- Conserved Domain Database: cd01857
Homologs
- Oryza sativa OsNug2
- Zea mays GRMZM2G408012_P01
Sequences
cDNA Sequence
- >AT2G27200.1
ATTTTATAAATCTAAGGAAATGTATCTAAAAACACTTGAAATATCTTAACTATCTACATCTATGCGATTGGAAGCAGTAGAGATAGTAAATTTCGCTTGAAAGATCTAATAGGCTAATACTACTTTTCTAATTTTATTTGTTTCGCACGAGAGTCTCTCTGCATTTCCGAGTTTTGCTGAAATCAAAATCAAAATCAAAATCACGACAAGAAGAACACAAAAGTGCTCAATCGTCTCCTCACGATATATATCTGCTGAATCGGAAAACTCAAAGGTTTCACCGGAGAAGAAAATGGGGAAGAACGAGAAAACATCTCTAGGTCGAGCCTTAGTGAAGCACCATAACCATATGATCCAGGAAACCAAGGAAAAAGGCAAATCCTACAAAGATCAACACAAGAAGGTTCTAGAATCCGTGACCGAAGTCAGCGACATCGATGCCATCATCGAACAAGCCGAAGAAGCTGAACGTCTTTTCGCGATTCATCACGATTCCGCAACTCCTGTTCCTATCAATATGGATACAGGTTCGAGTTCGAGTGGCATAACAGCTAAAGAATGGAAAGAGCAAAGGATGAGAGAAGAGGCTTTACATGCTAGTAGTCTTCAAGTTCCTCGTAGACCTCATTGGACACCTAAAATGAATGTGGAGAAACTTGATGCTAATGAAAAACAAGCTTTTCTCACTTGGCGACGGAAACTTGCGAGCCTCGAGGAAAATGAAAAGCTTGTGTTGACACCATTCGAGAAGAACCTTGATATCTGGAGACAACTTTGGCGAGTGCTTGAACGTAGTGATTTGATTGTTATGGTTGTTGATGCTAGAGATCCTCTGTTTTACCGCTGCCCTGATCTTGAGGCATATGCACAAGAAATTGATGAGCATAAAAAAACAATGCTTCTGGTCAACAAGGCAGATCTGTTACCTTCTTATGTCAGGGAGAAATGGGCGGAATACTTCTCCCGCAACAATATTCTGTTTGTCTTCTGGTCAGCCAAAGCTGCTACGGCTACCCTAGAAGGTAAACCCCTGAAAGAACAGTGGAGAGCACCTGATACCACACAGAAGACAGATAACCCAGCTGTGAAAGTATATGGAAGGGACGACCTTTTGGATCGATTAAAACTTGAGGCTCTAGAGATAGTAAAAATGAGGAAATCTAGAGGAGTTTCCGCAACTTCTACTGAATCACACTGCGAACAAGTTGTGGTTGGCTTTGTTGGGTACCCGAATGTGGGGAAGAGTTCGACAATCAACGCATTGGTAGGTCAGAAGCGAACTGGTGTCACATCTACCCCCGGGAAAACAAAGCATTTCCAGACATTGATAATCTCTGAGGATCTAATGCTCTGCGATTGCCCTGGTTTAGTCTTCCCTTCATTCTCAAGCTCAAGATATGAAATGGTTGCTTCTGGAGTTCTTCCAATAGACCGGATGACCGAGCACCTTGAAGCTATTAAGGTTGTGGCTGAACTTGTTCCTCGACATGCCATTGAGGATGTGTACAACATCTCTCTACCTAAACCCAAATCCTATGAACCTCAGTCCCGCCCACCTCTTGCCTCAGAGCTTCTAAGAACTTACTGCCTCTCTCGTGGTTATGTTGCCTCTAGTGGACTACCTGATGAGACTAGAGCAGCTAGGCAGATTCTGAAAGATTACATTGAAGGTAAGCTTCCACATTTTGCAATGCCTCCAGAGATAACCCGAGATGATGAAAACGAGACAGCGGATGACACTTTGGGAGCCGAAACAAGAGAAGGTTCACAGACTGAGAAGAAAGGTGAAGAAGCTCCTAGTCTTGGTCTTGATCAAGTTCTAGATGATCTTAGCTCGTTTGATCTTGCAAATGGACTTGTGTCTTCCAAAACGAAACAGCACAAGAAGTCACATAGGAAACAATGATTCGGTCTTGATGGAACGCCAATTCTGAGAGTTTTCCTGAAACCGATCAACAAATGCTCGAATATATGATACAGTTGTGGATTTTTCTTATTGTAGAAATCGTGATAACATTCTAACAGCTGTTGTTTAGATATTATGTTTGAGCAAATACTAGTGATATCGATAAAGTTTCAACTTGATGCTAGTCAATATATTGATGAAGAGTCCTTCGAAGCAGGTTTGGTAGTTGTAATATATTGCCATTGAGATATTATAGATCACTCACTCATTGTGGGTTTGTTTGTTTTCTATTTGTGGGTTTGTTTGTTTTTAAATATGTGTAAAATCTTGG
CDS Sequence
- >AT2G27200.1
ATGGGGAAGAACGAGAAAACATCTCTAGGTCGAGCCTTAGTGAAGCACCATAACCATATGATCCAGGAAACCAAGGAAAAAGGCAAATCCTACAAAGATCAACACAAGAAGGTTCTAGAATCCGTGACCGAAGTCAGCGACATCGATGCCATCATCGAACAAGCCGAAGAAGCTGAACGTCTTTTCGCGATTCATCACGATTCCGCAACTCCTGTTCCTATCAATATGGATACAGGTTCGAGTTCGAGTGGCATAACAGCTAAAGAATGGAAAGAGCAAAGGATGAGAGAAGAGGCTTTACATGCTAGTAGTCTTCAAGTTCCTCGTAGACCTCATTGGACACCTAAAATGAATGTGGAGAAACTTGATGCTAATGAAAAACAAGCTTTTCTCACTTGGCGACGGAAACTTGCGAGCCTCGAGGAAAATGAAAAGCTTGTGTTGACACCATTCGAGAAGAACCTTGATATCTGGAGACAACTTTGGCGAGTGCTTGAACGTAGTGATTTGATTGTTATGGTTGTTGATGCTAGAGATCCTCTGTTTTACCGCTGCCCTGATCTTGAGGCATATGCACAAGAAATTGATGAGCATAAAAAAACAATGCTTCTGGTCAACAAGGCAGATCTGTTACCTTCTTATGTCAGGGAGAAATGGGCGGAATACTTCTCCCGCAACAATATTCTGTTTGTCTTCTGGTCAGCCAAAGCTGCTACGGCTACCCTAGAAGGTAAACCCCTGAAAGAACAGTGGAGAGCACCTGATACCACACAGAAGACAGATAACCCAGCTGTGAAAGTATATGGAAGGGACGACCTTTTGGATCGATTAAAACTTGAGGCTCTAGAGATAGTAAAAATGAGGAAATCTAGAGGAGTTTCCGCAACTTCTACTGAATCACACTGCGAACAAGTTGTGGTTGGCTTTGTTGGGTACCCGAATGTGGGGAAGAGTTCGACAATCAACGCATTGGTAGGTCAGAAGCGAACTGGTGTCACATCTACCCCCGGGAAAACAAAGCATTTCCAGACATTGATAATCTCTGAGGATCTAATGCTCTGCGATTGCCCTGGTTTAGTCTTCCCTTCATTCTCAAGCTCAAGATATGAAATGGTTGCTTCTGGAGTTCTTCCAATAGACCGGATGACCGAGCACCTTGAAGCTATTAAGGTTGTGGCTGAACTTGTTCCTCGACATGCCATTGAGGATGTGTACAACATCTCTCTACCTAAACCCAAATCCTATGAACCTCAGTCCCGCCCACCTCTTGCCTCAGAGCTTCTAAGAACTTACTGCCTCTCTCGTGGTTATGTTGCCTCTAGTGGACTACCTGATGAGACTAGAGCAGCTAGGCAGATTCTGAAAGATTACATTGAAGGTAAGCTTCCACATTTTGCAATGCCTCCAGAGATAACCCGAGATGATGAAAACGAGACAGCGGATGACACTTTGGGAGCCGAAACAAGAGAAGGTTCACAGACTGAGAAGAAAGGTGAAGAAGCTCCTAGTCTTGGTCTTGATCAAGTTCTAGATGATCTTAGCTCGTTTGATCTTGCAAATGGACTTGTGTCTTCCAAAACGAAACAGCACAAGAAGTCACATAGGAAACAATGA
Protein Sequence
- >AT2G27200.1
MGKNEKTSLGRALVKHHNHMIQETKEKGKSYKDQHKKVLESVTEVSDIDAIIEQAEEAERLFAIHHDSATPVPINMDTGSSSSGITAKEWKEQRMREEALHASSLQVPRRPHWTPKMNVEKLDANEKQAFLTWRRKLASLEENEKLVLTPFEKNLDIWRQLWRVLERSDLIVMVVDARDPLFYRCPDLEAYAQEIDEHKKTMLLVNKADLLPSYVREKWAEYFSRNNILFVFWSAKAATATLEGKPLKEQWRAPDTTQKTDNPAVKVYGRDDLLDRLKLEALEIVKMRKSRGVSATSTESHCEQVVVGFVGYPNVGKSSTINALVGQKRTGVTSTPGKTKHFQTLIISEDLMLCDCPGLVFPSFSSSRYEMVASGVLPIDRMTEHLEAIKVVAELVPRHAIEDVYNISLPKPKSYEPQSRPPLASELLRTYCLSRGYVASSGLPDETRAARQILKDYIEGKLPHFAMPPEITRDDENETADDTLGAETREGSQTEKKGEEAPSLGLDQVLDDLSSFDLANGLVSSKTKQHKKSHRKQ