Gene Details:
- Gene ID: AT2G27030
- Gene Symbol: ACAM-2, CAM5
- Gene Name: calmodulin 5
- Description: calmodulin 5;(source:Araport11)
- TAIR Accession: locus:2059324
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
Gene Ontology:
- GO:0005829 — located in — cytosol
- GO:0005509 — enables — calcium ion binding
- GO:0005634 — located in — nucleus
- GO:0005886 — located in — plasma membrane
- GO:0000325 — located in — plant-type vacuole
- GO:0005777 — located in — peroxisome
- GO:0005737 — located in — cytoplasm
- GO:0005515 — enables — protein binding
- GO:0009888 — acts upstream of or within — tissue development
Function-related keywords:
- shoot axis apex , leaf lamina base , root , shoot system , plant embryo , vascular leaf , stamen , sepal , flower , inflorescence flower pedicel , cotyledon , petiole , hypocotyl , leaf apex , collective leaf structure , pollen , pollen
Literature:
- Primary structures of Arabidopsis calmodulin isoforms deduced from the sequences of cDNA clones. DOI: 10.1104/pp.96.4.1196 ; PMID: 16668320
- Analysis of EF-hand-containing proteins in Arabidopsis. DOI: 10.1186/gb-2002-3-10-research0056 ; PMID: 12372144
- Calmodulins and calcineurin B-like proteins: calcium sensors for specific signal response coupling in plants. DOI: 10.1105/tpc.001115 ; PMID: 12045290
- Calcium/calmodulin-mediated signal network in plants. DOI: 10.1016/j.tplants.2003.09.004 ; PMID: 14557048
- Proteomics of loosely bound cell wall proteins of Arabidopsis thaliana cell suspension cultures: a critical analysis. DOI: 10.1002/elps.200305608 ; PMID: 14595688
- and darkness-regulated Arabidopsis genes: a focus on calmodulin-like and XTH genes. DOI: 10.1111/j.1469-8137.2004.01238.x ; PMID: 15720654
- Handling calcium signaling: Arabidopsis CaMs and CMLs. DOI: 10.1016/j.tplants.2005.07.001 ; PMID: 16023399
- Systems analysis of seed filling in Arabidopsis: using general linear modeling to assess concordance of transcript and protein expression. DOI: 10.1104/pp.109.152413 ; PMID: 20118269
- Expression of calmodulin genes in wild type and calmodulin mutants of Arabidopsis thaliana under heat stress. DOI: 10.1016/j.plaphy.2010.04.011 ; PMID: 20554213
- AtIQM1, a novel calmodulin-binding protein, is involved in stomatal movement in Arabidopsis. DOI: 10.1007/s11103-012-9915-0 ; PMID: 22572939
- Endogenous Arabidopsis messenger RNAs transported to distant tissues. DOI: 10.1038/nplants.2015.25 ; PMID: 27247031
- Comparative Analysis of CDPK Family in Maize, Arabidopsis, Rice, and Sorghum Revealed Potential Targets for Drought Tolerance Improvement. DOI: 10.3389/fchem.2017.00115 ; PMID: 29312925
- Arabidopsis IQM4, a Novel Calmodulin-Binding Protein, Is Involved With Seed Dormancy and Germination in Arabidopsis. DOI: 10.3389/fpls.2018.00721 ; PMID: 29951071
- The Calmodulin-Binding Protein IQM1 Interacts with CATALASE2 to Affect Pathogen Defense. DOI: 10.1104/pp.19.01060 ; PMID: 31548265
- Arabidopsis cyclic nucleotide-gated channel 6 is negatively modulated by multiple calmodulin isoforms during heat shock. DOI: 10.1093/jxb/erz445 ; PMID: 31587070
- Handling calcium signaling: Arabidopsis CaMs and CMLs. DOI: 10.1016/j.tplants.2005.07.001 ; PMID: 16023399
- A proteomics dissection of Arabidopsis thaliana vacuoles isolated from cell culture. DOI: 10.1074/mcp.M600250-MCP200 ; PMID: 17151019
- Quantitative phosphoproteomics of early elicitor signaling in Arabidopsis. DOI: 10.1074/mcp.M600429-MCP200 ; PMID: 17317660
- A high content in lipid-modified peripheral proteins and integral receptor kinases features in the arabidopsis plasma membrane proteome. DOI: 10.1074/mcp.M700099-MCP200 ; PMID: 17644812
- Analysis of the Arabidopsis cytosolic proteome highlights subcellular partitioning of central plant metabolism. DOI: 10.1021/pr1009433 ; PMID: 21166475
- Primary structures of Arabidopsis calmodulin isoforms deduced from the sequences of cDNA clones. DOI: 10.1104/pp.96.4.1196 ; PMID: 16668320
- Handling calcium signaling: Arabidopsis CaMs and CMLs. DOI: 10.1016/j.tplants.2005.07.001 ; PMID: 16023399
- A proteomics dissection of Arabidopsis thaliana vacuoles isolated from cell culture. DOI: 10.1074/mcp.M600250-MCP200 ; PMID: 17151019
- Quantitative phosphoproteomics of early elicitor signaling in Arabidopsis. DOI: 10.1074/mcp.M600429-MCP200 ; PMID: 17317660
- A high content in lipid-modified peripheral proteins and integral receptor kinases features in the arabidopsis plasma membrane proteome. DOI: 10.1074/mcp.M700099-MCP200 ; PMID: 17644812
- Analysis of the Arabidopsis cytosolic proteome highlights subcellular partitioning of central plant metabolism. DOI: 10.1021/pr1009433 ; PMID: 21166475
- Primary structures of Arabidopsis calmodulin isoforms deduced from the sequences of cDNA clones. DOI: 10.1104/pp.96.4.1196 ; PMID: 16668320
- Handling calcium signaling: Arabidopsis CaMs and CMLs. DOI: 10.1016/j.tplants.2005.07.001 ; PMID: 16023399
- A proteomics dissection of Arabidopsis thaliana vacuoles isolated from cell culture. DOI: 10.1074/mcp.M600250-MCP200 ; PMID: 17151019
- Quantitative phosphoproteomics of early elicitor signaling in Arabidopsis. DOI: 10.1074/mcp.M600429-MCP200 ; PMID: 17317660
- A high content in lipid-modified peripheral proteins and integral receptor kinases features in the arabidopsis plasma membrane proteome. DOI: 10.1074/mcp.M700099-MCP200 ; PMID: 17644812
- Analysis of the Arabidopsis cytosolic proteome highlights subcellular partitioning of central plant metabolism. DOI: 10.1021/pr1009433 ; PMID: 21166475
- Comparative Analysis of CDPK Family in Maize, Arabidopsis, Rice, and Sorghum Revealed Potential Targets for Drought Tolerance Improvement. DOI: 10.3389/fchem.2017.00115 ; PMID: 29312925
Sequences:
cDNA Sequence
- >AT2G27030.3
TTTTTCCTTCTTTATAATTCCACACAACAATCCTCTCATTACACACACCAACGTTGATTCTTCTTCTTCTTCTTCTTCTCTCTTTCTCATCTAAACCAAAAAATGGCAGATCAGCTCACCGATGATCAGATCTCTGAGTTCAAGGAAGCTTTTAGCCTTTTCGACAAAGACGGAGATGGTTGCATCACAACGAAAGAGCTAGGAACAGTGATGAGATCATTAGGTCAAAATCCAACAGAAGCAGAGTTACAAGATATGATAAACGAAGTAGATGCTGATGGTAACGGAACCATAGACTTCCCTGAGTTTCTGAACCTAATGGCTAGGAAGATGAAGGACACTGACTCTGAAGAAGAGCTCAAAGAAGCTTTCAGGGTTTTCGATAAGGACCAGAACGGTTTCATCTCGGCAGCTGAGTTAAGACATGTAATGACAAATCTTGGTGAGAAGTTAACTGATGAAGAAGTTGATGAGATGATCAAAGAAGCTGATGTTGATGGAGATGGTCAGATCAATTATGAAGAGTTTGTCAAAGTTATGATGGCAAAGAGAAGAGGGAAGAGAGTTATGGCAGCAAAGCGTAGTAGCAATTCTGCTGAATACAAAGAAAAGAATGGTCGCCGGAAAAGTCACTGCCGTATTCTCTGAGCTCCGACCATTTGCTTCTTAATTCCTTTTCTTTATATGTTTGTGTGCAATAAGAGATTTGTACCTCTCACACCCATTAAACGGATTTTAAATGTCATATCTTGTTTGAATATGTTAAATATTTACTATACTGTTATATAAAAAGTTTTAAAGTACTATCAATATAGTAAGTTCATTTAGGC - >AT2G27030.1
TTTTTCCTTCTTTATAATTCCACACAACAATCCTCTCATTACACACACCAACGTTGATTCTTCTTCTTCTTCTTCTTCTCTCTTTCTCATCTAAACCAAAAAATGGCAGATCAGCTCACCGATGATCAGATCTCTGAGTTCAAGGAAGCTTTTAGCCTTTTCGACAAAGACGGAGATGGTTGCATCACAACGAAAGAGCTAGGAACAGTGATGAGATCATTAGGTCAAAATCCAACAGAAGCAGAGTTACAAGATATGATAAACGAAGTAGATGCTGATGGTAACGGAACCATAGACTTCCCTGAGTTTCTGAACCTAATGGCTAGGAAGATGAAGGACACTGACTCTGAAGAAGAGCTCAAAGAAGCTTTCAGGGTTTTCGATAAGGACCAGAACGGTTTCATCTCGGCAGCTGAGTTAAGACATGTAATGACAAATCTTGGTGAGAAGTTAACTGATGAAGAAGTTGATGAGATGATCAAAGAAGCTGATGTTGATGGAGATGGTCAGATCAATTATGAAGAGTTTGTCAAAGTTATGATGGCAAAGAGAAGAGGGAAGAGAGTTATGGCAGCAAAGCGTAGTAGCAATTCTGCTGAATACAAAGAAAAGAATGGTCGCCGGAAAAGTCACTGCCGTATTCTCTGAGCTCCGACCATTTGCTTCTTAATTCCTTTTCTTTATATGTTTGTGTGCAATAAGAGATTTGTACCTCTCACACCCATTAAACGGATTTTAAATGTCATATCTTGTTTGAATATGTTAAATATTTACTATACTGTTATATAAAAAGTTTTAAAGTACTATCAATATAGTAAGTTCATTTAGGC
CDS Sequence
- >AT2G27030.3
ATGGCAGATCAGCTCACCGATGATCAGATCTCTGAGTTCAAGGAAGCTTTTAGCCTTTTCGACAAAGACGGAGATGGTTGCATCACAACGAAAGAGCTAGGAACAGTGATGAGATCATTAGGTCAAAATCCAACAGAAGCAGAGTTACAAGATATGATAAACGAAGTAGATGCTGATGGTAACGGAACCATAGACTTCCCTGAGTTTCTGAACCTAATGGCTAGGAAGATGAAGGACACTGACTCTGAAGAAGAGCTCAAAGAAGCTTTCAGGGTTTTCGATAAGGACCAGAACGGTTTCATCTCGGCAGCTGAGTTAAGACATGTAATGACAAATCTTGGTGAGAAGTTAACTGATGAAGAAGTTGATGAGATGATCAAAGAAGCTGATGTTGATGGAGATGGTCAGATCAATTATGAAGAGTTTGTCAAAGTTATGATGGCAAAGAGAAGAGGGAAGAGAGTTATGGCAGCAAAGCGTAGTAGCAATTCTGCTGAATACAAAGAAAAGAATGGTCGCCGGAAAAGTCACTGCCGTATTCTCTGA - >AT2G27030.1
ATGGCAGATCAGCTCACCGATGATCAGATCTCTGAGTTCAAGGAAGCTTTTAGCCTTTTCGACAAAGACGGAGATGGTTGCATCACAACGAAAGAGCTAGGAACAGTGATGAGATCATTAGGTCAAAATCCAACAGAAGCAGAGTTACAAGATATGATAAACGAAGTAGATGCTGATGGTAACGGAACCATAGACTTCCCTGAGTTTCTGAACCTAATGGCTAGGAAGATGAAGGACACTGACTCTGAAGAAGAGCTCAAAGAAGCTTTCAGGGTTTTCGATAAGGACCAGAACGGTTTCATCTCGGCAGCTGAGTTAAGACATGTAATGACAAATCTTGGTGAGAAGTTAACTGATGAAGAAGTTGATGAGATGATCAAAGAAGCTGATGTTGATGGAGATGGTCAGATCAATTATGAAGAGTTTGTCAAAGTTATGATGGCAAAGAGAAGAGGGAAGAGAGTTATGGCAGCAAAGCGTAGTAGCAATTCTGCTGAATACAAAGAAAAGAATGGTCGCCGGAAAAGTCACTGCCGTATTCTCTGA
Protein Sequence
- >AT2G27030.3
MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIKEADVDGDGQINYEEFVKVMMAKRRGKRVMAAKRSSNSAEYKEKNGRRKSHCRIL - >AT2G27030.1
MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIKEADVDGDGQINYEEFVKVMMAKRRGKRVMAAKRSSNSAEYKEKNGRRKSHCRIL