Information report for AT2G26990
Gene Details
|
|
Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
- GO:0008180 — part of — COP9 signalosome
- GO:0000338 — acts upstream of or within — protein deneddylation
- GO:0009640 — acts upstream of or within — photomorphogenesis
- GO:0030163 — acts upstream of or within — protein catabolic process
- GO:0008180 — located in — COP9 signalosome
- GO:0005634 — located in — nucleus
- GO:0000338 — involved in — protein deneddylation
- GO:0005515 — enables — protein binding
Functional Keywords
Literature and News
- The COP9 complex is conserved between plants and mammals and is related to the 26S proteasome regulatory complex. DOI: 10.1016/s0960-9822(07)00372-7 ; PMID: 9707402
- The COP9 signalosome: from light signaling to general developmental regulation and back. DOI: 10.1016/s1369-5266(00)00101-1 ; PMID: 11019806
- Subunit interaction maps for the regulatory particle of the 26S proteasome and the COP9 signalosome. DOI: 10.1093/emboj/20.24.7096 ; PMID: 11742986
- Characterization of the last subunit of the Arabidopsis COP9 signalosome: implications for the overall structure and origin of the complex. DOI: 10.1105/tpc.009092 ; PMID: 12615944
- Alternative splicing modulation by a LAMMER kinase impinges on developmental and transcriptome expression. DOI: 10.1105/tpc.011056 ; PMID: 12671088
- Unified nomenclature for the COP9 signalosome and its subunits: an essential regulator of development. DOI: 10.1016/s0168-9525(00)01982-x ; PMID: 10782111
- Role of the MPN subunits in COP9 signalosome assembly and activity, and their regulatory interaction with Arabidopsis Cullin3-based E3 ligases. DOI: 10.1105/tpc.106.047571 ; PMID: 17307927
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Revisiting the COP9 signalosome as a transcriptional regulator. DOI: 10.1038/embor.2009.33 ; PMID: 19305390
- SMALL ACIDIC PROTEIN1 acts with RUB modification components, the COP9 signalosome, and AXR1 to regulate growth and development of Arabidopsis. DOI: 10.1104/pp.111.188409 ; PMID: 22576848
- The COP9 signalosome: from light signaling to general developmental regulation and back. DOI: 10.1016/s1369-5266(00)00101-1 ; PMID: 11019806
Gene Resources
- UniProt: A0A178VSH3
- EMBL: CACRSJ010000105, CACSHJ010000088, LR881467
- AlphaFoldDB: A0A178VSH3
- EnsemblPlants: AT2G26990.1
- Gramene: AT2G26990.1
- KEGG: ath:AT2G26990
- Orthologous matrix: SEENWKD
- ExpressionAtlas: AT2G26990
- InterPro: IPR000717, IPR036390, IPR050871
- PANTHER: PTHR10678
- SUPFAM: SSF46785
- PROSITE: PS50250
- Gene3D: 1.25.40.570
- OrthoDB: A0A178VSH3
- SWISS-MODEL: A0A178VSH3
Sequences
cDNA Sequence
- >AT2G26990.1
ATTATCTCTTACCTACTCGGCCCAATAGTAATATTTCACAAATCCAGCAACAAATCTTACTTCTTCCACCTTCTTCTTCTCTTCTTCTTCTCTTCTTCTTCTACTTCCGCAAAAACCCTTTGAGAAAGAGAAGCAAAATTCTCTAATCGTTCTTTCTCTGCCCTAATCCACGTATCGTTTGGTGTTCTTCTTCATCGAATCGACATGGCTTCAGATGCTGACATGGAGGACTATGGATTCGAGTATTCTGATGAGGAGCAAGAGGAACAAGATGTTGACATTGAGAACCAGTATTATAACTCTAAAGGTATGGTTGAGACTGAACCTGAAGAAGCACTTTCTGGATTTGCTGAGGTTGTTCAGATGGAACCTGAGAAAGCTGACTGGGGTTTCAAAGCTCTTAAGCAGACTGTGAAGATCTATTATCGTCTAGGTAAATACAAAGAAATGATGGAAGCCTATACAGAGATGCTTACATATATCAAGTCAGCAGTCACCAGGAATTACAGCGAAAAATGTATAAACAATATCATGGATTTCGTCTCTGGATCTGCTAGCCAGAACACTGGCCTGCTGCAAGAGTTCTATCAGACCACTTTGAAAGCCCTTGAAGAGGCTAAGAATGAGAGACTCTGGTTCAAGACAAATCTTAAACTCTGCAACATCTGGTTTGACATTGGTGAATACAGACGGATGACTAAGATTCTGAAGGAACTCCATAAGTCTTGTCAAAAGGAAGATGGAACTGATGATCAGAAGAAAGGAAGTCAGCTGCTTGAGGTTTATGCAATTGAAATTCAGATTTACACTGAAACGAAGGACAACAAAAAGCTTAAGCAACTATACCATAAGGCACTTGCCATCAAGTCTGCCATACCTCATCCTAGGATCATGGGTATAATCCGCGAGTGTGGTGGAAAAATGCACATGGCAGAACGTCAGTGGGAAGAAGCAGCGACAGACTTCTTTGAGGCTTTTAAAAATTACGATGAAGCTGGCAACCAAAGACGTATACAGTGCCTGAAGTATCTTGTTCTGGCGAATATGCTGATGGAGTCAGAAGTGAATCCGTTTGATGGCCAAGAGGCAAAGCCGTACAAAAACGACCCTGAGATTTTGGCAATGACAAATTTGATCGCAGCATATCAACGAAATGAGATCATAGAGTTTGAGAGAATACTAAAGAGTAACCGGAGGACGATAATGGATGATCCATTCATCAGAAACTACATGGAAGATCTGCTGAAGAAAGTGAGAACACAAGTGTTACTGAAGCTGATTAAGCCATACACAAAGATAGGGATTCCGTTCATATCAAAGGAACTGAACGTGCCAGAGACGGATGTGACGGAGTTACTAGTGTCGCTGATACTCGACAGCAGAATCGATGGTCACATTGATGAAATGAACCGTTACTTACTGAGAGGCGACAGTGGCAATGGAAGGAAGTTGCATAAGGCGGTTGATAAATGGAACTCACAGCTCAAGTCTCTTTCTTCAAATATCACCAGCCGAGTCTGTTAACTTGGAAACCTCTCTTTTGGATAGATTTTGTGATTTGGCGTTGATTCTTTGTGGATTATCTGTTTCTCTTCACATAGCTGGATTTGATGGAGTTTATAAACCACTTCAATGCCAAGAAAAAGGATTTGAAACTTTTCTTCATTCTCATTTTTAAAATTGATTTCTTAACTTTGCAGCAACTAGATAGTAATTGCAAGCGATGGGTGATATGCACCGGAACTCTTACAAATAACGTGGATGTCTTTTTCGAGTAAGGTTACGACTATGAATATTAAAAGTGAAACAAATCTGAACAA
CDS Sequence
- >AT2G26990.1
ATGGCTTCAGATGCTGACATGGAGGACTATGGATTCGAGTATTCTGATGAGGAGCAAGAGGAACAAGATGTTGACATTGAGAACCAGTATTATAACTCTAAAGGTATGGTTGAGACTGAACCTGAAGAAGCACTTTCTGGATTTGCTGAGGTTGTTCAGATGGAACCTGAGAAAGCTGACTGGGGTTTCAAAGCTCTTAAGCAGACTGTGAAGATCTATTATCGTCTAGGTAAATACAAAGAAATGATGGAAGCCTATACAGAGATGCTTACATATATCAAGTCAGCAGTCACCAGGAATTACAGCGAAAAATGTATAAACAATATCATGGATTTCGTCTCTGGATCTGCTAGCCAGAACACTGGCCTGCTGCAAGAGTTCTATCAGACCACTTTGAAAGCCCTTGAAGAGGCTAAGAATGAGAGACTCTGGTTCAAGACAAATCTTAAACTCTGCAACATCTGGTTTGACATTGGTGAATACAGACGGATGACTAAGATTCTGAAGGAACTCCATAAGTCTTGTCAAAAGGAAGATGGAACTGATGATCAGAAGAAAGGAAGTCAGCTGCTTGAGGTTTATGCAATTGAAATTCAGATTTACACTGAAACGAAGGACAACAAAAAGCTTAAGCAACTATACCATAAGGCACTTGCCATCAAGTCTGCCATACCTCATCCTAGGATCATGGGTATAATCCGCGAGTGTGGTGGAAAAATGCACATGGCAGAACGTCAGTGGGAAGAAGCAGCGACAGACTTCTTTGAGGCTTTTAAAAATTACGATGAAGCTGGCAACCAAAGACGTATACAGTGCCTGAAGTATCTTGTTCTGGCGAATATGCTGATGGAGTCAGAAGTGAATCCGTTTGATGGCCAAGAGGCAAAGCCGTACAAAAACGACCCTGAGATTTTGGCAATGACAAATTTGATCGCAGCATATCAACGAAATGAGATCATAGAGTTTGAGAGAATACTAAAGAGTAACCGGAGGACGATAATGGATGATCCATTCATCAGAAACTACATGGAAGATCTGCTGAAGAAAGTGAGAACACAAGTGTTACTGAAGCTGATTAAGCCATACACAAAGATAGGGATTCCGTTCATATCAAAGGAACTGAACGTGCCAGAGACGGATGTGACGGAGTTACTAGTGTCGCTGATACTCGACAGCAGAATCGATGGTCACATTGATGAAATGAACCGTTACTTACTGAGAGGCGACAGTGGCAATGGAAGGAAGTTGCATAAGGCGGTTGATAAATGGAACTCACAGCTCAAGTCTCTTTCTTCAAATATCACCAGCCGAGTCTGTTAA
Protein Sequence
- >AT2G26990.1
MASDADMEDYGFEYSDEEQEEQDVDIENQYYNSKGMVETEPEEALSGFAEVVQMEPEKADWGFKALKQTVKIYYRLGKYKEMMEAYTEMLTYIKSAVTRNYSEKCINNIMDFVSGSASQNTGLLQEFYQTTLKALEEAKNERLWFKTNLKLCNIWFDIGEYRRMTKILKELHKSCQKEDGTDDQKKGSQLLEVYAIEIQIYTETKDNKKLKQLYHKALAIKSAIPHPRIMGIIRECGGKMHMAERQWEEAATDFFEAFKNYDEAGNQRRIQCLKYLVLANMLMESEVNPFDGQEAKPYKNDPEILAMTNLIAAYQRNEIIEFERILKSNRRTIMDDPFIRNYMEDLLKKVRTQVLLKLIKPYTKIGIPFISKELNVPETDVTELLVSLILDSRIDGHIDEMNRYLLRGDSGNGRKLHKAVDKWNSQLKSLSSNITSRVC