Information report for AT2G26580
Gene Details
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Functional Descriptions
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
Functional Keywords
Literature and News
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- Molecular and genetic interactions between STYLOSA and GRAMINIFOLIA in the control of Antirrhinum vegetative and reproductive development. DOI: 10.1242/dev.01205 ; PMID: 15229173
- KANADI and class III HD-Zip gene families regulate embryo patterning and modulate auxin flow during embryogenesis in Arabidopsis. DOI: 10.1105/tpc.106.047472 ; PMID: 17307928
- Expression of the ASYMMETRIC LEAVES2 gene in the adaxial domain of Arabidopsis leaves represses cell proliferation in this domain and is critical for the development of properly expanded leaves. DOI: 10.1111/j.1365-313X.2007.03132.x ; PMID: 17559509
- Knowledge-based fuzzy adaptive resonance theory and its application to the analysis of gene expression in plants. DOI: 10.1263/jbb.106.587 ; PMID: 19134556
- Asymmetric leaves2 and Elongator, a histone acetyltransferase complex, mediate the establishment of polarity in leaves of Arabidopsis thaliana. DOI: 10.1093/pcp/pcr083 ; PMID: 21700721
- Evolution of the YABBY gene family with emphasis on the basal eudicot Eschscholzia californica (Papaveraceae). DOI: 10.1111/j.1438-8677.2011.00486.x ; PMID: 21974722
- The ASYMMETRIC LEAVES Complex Employs Multiple Modes of Regulation to Affect Adaxial-Abaxial Patterning and Leaf Complexity. DOI: 10.1105/tpc.15.00454 ; PMID: 26589551
- A PXY-Mediated Transcriptional Network Integrates Signaling Mechanisms to Control Vascular Development in Arabidopsis. DOI: 10.1105/tpc.19.00562 ; PMID: 31806676
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- KANADI and class III HD-Zip gene families regulate embryo patterning and modulate auxin flow during embryogenesis in Arabidopsis. DOI: 10.1105/tpc.106.047472 ; PMID: 17307928
- Independence and interaction of regions of the INNER NO OUTER protein in growth control during ovule development. DOI: 10.1104/pp.107.114603 ; PMID: 18326791
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- KANADI and class III HD-Zip gene families regulate embryo patterning and modulate auxin flow during embryogenesis in Arabidopsis. DOI: 10.1105/tpc.106.047472 ; PMID: 17307928
Gene Resources
- UniProt: A0A178VPK4
- EMBL: CACRSJ010000105, CACSHJ010000088, LR881467
- AlphaFoldDB: A0A178VPK4
- EnsemblPlants: AT2G26580.1, AT2G26580.2
- Gramene: AT2G26580.1, AT2G26580.2
- KEGG: ath:AT2G26580
- Orthologous matrix: PEYRIEL
- ExpressionAtlas: AT2G26580
- InterPro: IPR006780, IPR036910
- PANTHER: PTHR31675, PTHR31675:SF49
- SUPFAM: SSF47095
- Gene3D: 1.10.30.10
- OrthoDB: A0A178VPK4
- SWISS-MODEL: A0A178VPK4
- Conserved Domain Database: cd00084
Homologs
- Brassica napus GSBRNA2T00066168001, GSBRNA2T00138788001
- Brassica oleracea XP_013623717.1, XP_013623716.1
- Brassica rapa XP_009133936.1, XP_009133935.1
- Glycine max Glyma.13G157800.1.p
- Raphanus raphanistrum RrC10672_p1
- Vitis vinifera GSVIVT01015567001
Sequences
cDNA Sequence
- >AT2G26580.1
CACATTGCATATAATAATTTTGCCCCTTTAACTCTCATCCTCTCCTTAGGCTTATGTATTATCTTCCCATTTATTCAATTACCTTTATGATCACTTGGAATAGTTGTTGAAGTACAATACCCGTTTTTAAGGCAAGTGTCTGTTCGGGTTGATATATATATATATAGAGAGAGAGAGAGAGACTATATCTTTTCACCTATATAATTGCTCTCTTCTTCTATCTAAATCTTCAACACAAACATCTTGTTTGGTCCTATTTCTCAGATCGATCATGGCTAACTCTGTGATGGCAACCGAACAGCTCTGCTACATCCCTTGCAACTTTTGCAACATAATTCTTGCGGTGAATGTCCCATGCAGCAGCCTGTTCGACATCGTGACCGTCCGATGCGGTCACTGCACCAATCTGTGGTCTGTAAACATGGCAGCTGCTCTTCAGTCGCTTTCACGCCCTAATTTCCAGGCAACAAACTATGCAGTACCAGAGTATGGATCCTCCTCAAGAAGCCACACAAAAATCCCTTCAAGAATTTCAACTCGTACCATAACTGAGCAACGGATTGTAAACCGTCCTCCGGAGAAGCGGCAGCGAGTACCTTCTGCGTACAATCAATTCATAAAAGAGGAAATTCAGAGGATTAAGGCGAATAATCCAGACATAAGCCACAGAGAAGCATTCAGCACTGCTGCCAAGAATTGGGCACACTTTCCTCATATTCACTTTGGTCTAATGCTGGAGAGTAACAAGCAAGCTAAGATAGCCTAATAATTCTCGAGATTAATGGTAATATAAGTGTTGGAGACTTCGAAGTAACAAGAGCTGAGAAGGCAACTATATGTATTGTATGATCTTTGGAACCGTATGTATGTAAGTGAAGATGTCTATCTTTAAAACCATCTATAGTTATAATTTAGTAAAAGCTTCTTTTAATTTATTTCTATGGCCCTTGTTGTATGGTTCGTCTCACAAGATTTATGAGTTCTTTCGGATATATGAATCTAAAATAAAAAATATGTAATCTATATTATGGTAAACCTATCTTATACTTGAATTATAAATAGTAAATATTACAATAAGTATTTTTTTTCTTTAACGATGTAGCAAATTCTCTATGAGTTAGTGGTT - >AT2G26580.2
CACATTGCATATAATAATTTTGCCCCTTTAACTCTCATCCTCTCCTTAGGCTTATGTATTATCTTCCCATTTATTCAATTACCTTTATGATCACTTGGAATAGTTGTTGAAGTACAATACCCGTTTTTAAGGCAAGTGTCTGTTCGGGTTGATATATATATATATAGAGAGAGAGAGAGAGACTATATCTTTTCACCTATATAATTGCTCTCTTCTTCTATCTAAATCTTCAACACAAACATCTTGTTTGGTCCTATTTCTCAGATCGATCATGGCTAACTCTGTGATGGCAACCGAACAGCTCTGCTACATCCCTTGCAACTTTTGCAACATAATTCTTGCGGTGAATGTCCCATGCAGCAGCCTGTTCGACATCGTGACCGTCCGATGCGGTCACTGCACCAATCTGTGGTCTGTAAACATGGCAGCTGCTCTTCAGTCGCTTTCACGCCCTAATTTCCAGGCAACAAACTATGCAGTACCAGAGTATGGATCCTCCTCAAGAAGCCACACAAAAATCCCTTCAAGAATTTCAACTCGTACCATAACTGAGCAACGGATTGTAAACCGTCCTCCGGAGAAGCGGCAGCGAGTACCTTCTGCGTACAATCAATTCATAAAAGAGGAAATTCAGAGGATTAAGGCGAATAATCCAGACATAAGCCACAGAGAAGCATTCAGCACTGCTGCCAAGAATTGGGCACACTTTCCTCATATTCACTTTGGTCTAATGCTGGAGAGTAACAAGCAAGCTAAGATAGCCTAATAATTCTCGAGATTAATGGTAATATAAGTGTTGGAGACTTCGAAGTAACAAGAGCTGAGAAGGCAACTATATGTATTGTATGATCTTTGGAACCGTATGTATGTAAGTGAAGATGTCTATCTTTAAAACCATCTATAGTTATAATTTAGTAAAAGCTTCTTTTAATTTATTTCTATGGCCCTTGTTGTATGGTTCGTCTCACAAGATTTATGAGTTCTTTCGGATATATGAATCTAAAATAAAAAATATGTAATCTATATTATGGTAAACCTATCTTATACTTGAATTATAAATAGTAAATATTACAATAAGTATTTTTTTTCTTTAACGATGTAGCAAATTCTCTATGAGTTAGTGGTT
CDS Sequence
- >AT2G26580.1
ATGGCTAACTCTGTGATGGCAACCGAACAGCTCTGCTACATCCCTTGCAACTTTTGCAACATAATTCTTGCGGTGAATGTCCCATGCAGCAGCCTGTTCGACATCGTGACCGTCCGATGCGGTCACTGCACCAATCTGTGGTCTGTAAACATGGCAGCTGCTCTTCAGTCGCTTTCACGCCCTAATTTCCAGGCAACAAACTATGCAGTACCAGAGTATGGATCCTCCTCAAGAAGCCACACAAAAATCCCTTCAAGAATTTCAACTCGTACCATAACTGAGCAACGGATTGTAAACCGTCCTCCGGAGAAGCGGCAGCGAGTACCTTCTGCGTACAATCAATTCATAAAAGAGGAAATTCAGAGGATTAAGGCGAATAATCCAGACATAAGCCACAGAGAAGCATTCAGCACTGCTGCCAAGAATTGGGCACACTTTCCTCATATTCACTTTGGTCTAATGCTGGAGAGTAACAAGCAAGCTAAGATAGCCTAA - >AT2G26580.2
ATGGCTAACTCTGTGATGGCAACCGAACAGCTCTGCTACATCCCTTGCAACTTTTGCAACATAATTCTTGCGGTGAATGTCCCATGCAGCAGCCTGTTCGACATCGTGACCGTCCGATGCGGTCACTGCACCAATCTGTGGTCTGTAAACATGGCAGCTGCTCTTCAGTCGCTTTCACGCCCTAATTTCCAGGCAACAAACTATGCAGTACCAGAGTATGGATCCTCCTCAAGAAGCCACACAAAAATCCCTTCAAGAATTTCAACTCGTACCATAACTGAGCAACGGATTGTAAACCGTCCTCCGGAGAAGCGGCAGCGAGTACCTTCTGCGTACAATCAATTCATAAAAGAGGAAATTCAGAGGATTAAGGCGAATAATCCAGACATAAGCCACAGAGAAGCATTCAGCACTGCTGCCAAGAATTGGGCACACTTTCCTCATATTCACTTTGGTCTAATGCTGGAGAGTAACAAGCAAGCTAAGATAGCCTAA
Protein Sequence
- >AT2G26580.1
MANSVMATEQLCYIPCNFCNIILAVNVPCSSLFDIVTVRCGHCTNLWSVNMAAALQSLSRPNFQATNYAVPEYGSSSRSHTKIPSRISTRTITEQRIVNRPPEKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHFGLMLESNKQAKIA - >AT2G26580.2
MANSVMATEQLCYIPCNFCNIILAVNVPCSSLFDIVTVRCGHCTNLWSVNMAAALQSLSRPNFQATNYAVPEYGSSSRSHTKIPSRISTRTITEQRIVNRPPEKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHFGLMLESNKQAKIA