Gene Details:
- Gene ID: AT2G26200
- Gene Symbol: AtTRM140a, TRM140a
- Gene Name: tRNA methyltransferase 140a
- Description: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11)
- TAIR Accession: locus:2057756
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
Gene Ontology:
- GO:0044085 — acts upstream of or within — cellular component biogenesis
- GO:0010468 — acts upstream of or within — regulation of gene expression
- GO:0005634 — located in — nucleus
- GO:0016070 — acts upstream of or within — RNA metabolic process
Function-related keywords:
- shoot system , plant embryo , stamen , inflorescence flower pedicel , cotyledon , petiole , hypocotyl , leaf apex , collective leaf structure , pollen
Literature:
- Transcriptional profile of the Arabidopsis root quiescent center. DOI: 10.1105/tpc.105.031724 ; PMID: 15937229
- Identification of tRNA nucleoside modification genes critical for stress response and development in rice and Arabidopsis. DOI: 10.1186/s12870-017-1206-0 ; PMID: 29268705
Sequences:
cDNA Sequence
- >AT2G26200.2
AAAACTCTAAAAATCTTCTTCAGATTTTTTCTCAGGGAAGAAGAACCAGAGCGTTTAACGTCGACGAACACAGATACGGCGTGTGGTAATAAATAATGTCTTCTGGCTTGAAAATCATAGAAGAACCGCAAAAACCGATTGAGAAGCTGCAGATTTATCCGACGGCTAATGCTGGTGTTTCTCCCTTTTGGCGAGACAAGTATGAGCGAGATGCTAAAAAGTATTGGGATATATTTTACAAGCATCATGGAGACAGATTTTTCAAAGACCGCCACTACTTGGATAAGGAATGGAATAGCTATTTTTCCGTTAGTGGGAAAAGTGTCATTCTTGAGGTTGGCTGTGGAGCTGGAAACACCATCTTTCCATTGATCGCCACATATCCAGACATTTTTGTTTATGCATGTGATTTTTCACCACGAGCCGTCGAATTGGTCAAGGCTCATGATGAATACACAGAGACACGCGTTTGTGCATTTGCTTGTGACTTGACAGGGGATGGTCTTGACAAGCATATTTCTCCATCTTCAGTTGATATTGTGACCATGATATTTGTTTTATCTGCGGTATCCCCAGAGAAGATGTCCTCAGTATTGCAGAACATTAGGAAAGTTCTTAAGCCAAATGGGTGTATCCTCTTCCGTGACTATGCTGTCGGTGATCTTGCTCAGGAGAGGTTCTCTGGGAAGGATCAGAGGATCAGCGAGAACTTTTATGTGAGAGGTGATGGCACTCGTGCATTCTACTTTTCTAATGAATTCCTAGAAACTTTGTTTTCTGAACAAGGATTTGAAGTTGAGGAGCTTGATGTTTGCTGCAAACAAGTTGAGAATCGTTCACGCGAACTGGTCATGAATCGGCGCTGGGTCCAAGCTACATTTCGTCGAACAAATGGCAACAAAAACCCTTGTGATAGTTTGACTCCTGCCAAATTAGATAAATCTGAACAACAGGATAGCATTCAGTCTAAATCTGAGGAGCAGGAAAGAAAAGAGATTATTGATTACACTGACATTGACATATCTGATGGTCTGGCTATGGAAATGTTTGGAGCCTCCCCATCAAGTCATGAGGAACCCAAACATTGTTTCTGGAAAACGGGTGTTGGAATTGGGTTGTGGCTGCACAGGAATTTGCTCGATGGTAGCTGCCAGATCAGCTAACCTTGTGGTAGCAACCGATGCAGACACAAAGGCACTTACGCTATTGACAGAGAACATCACAATGAACCTCCAATCTTCTTTACTTGGAAAACTGAAAACAAGCGTACTTGAATGGGGAAACAAAGAGCATATAGAAAGCATTAAGCGTTTGGCTTGTGAGGGATTCGAAGTTATCATGGGGACAGATGTTACCTATGTAGCTGAAGCCATTATACCTTTATTTGAAACCGCAAAAGAGTTGATCTTACGGAAAATGGGAGACGACTTAGAGGTGCAAGAGAAGCCGGCGTTGATTCTATGCCATGTTTTCAGAAGGGTTGATGAACCTTCTCTTCTGTCAGCTGCATCTAAGTTTGGGTTTAAGCTTGCAGACAGATGGGCTGCAAATTCAAAGGAATCTCCTATTGGGAACATCATTGACAGTTGGTTTTCCGAAAAGGATTTGGTCGCAGAAATCCCGAGTTCTGCGTTGCATATTCTCTATTTTCAGATGGAGTAACTATGTGGTAGAGGAGCAAATGTTGATTAACTGGAGAGTTCTTTTATATTAAAAAATCCTCATTGAATCTCAAATCAATGAATGTCCTACATGTATTCTTCTATATTAGCAATGGATTTTTTGGGTATAAAACTATTACATGATGATGACTTGTTGTTACCAGCCTTCCTTATCATCCATTTCCCTCACGATTTTGACATTTTTAATGGCTTTATGAGAGTTGAATCCACATGTTAACTCGGTCCTGCAGAAACACTTTCCCTTTT - >AT2G26200.1
AAAACTCTAAAAATCTTCTTCAGATTTTTTCTCAGGGAAGAAGAACCAGAGCGTTTAACGTCGACGAACACAGATACGGCGTGTGGTAATAAATAATGTCTTCTGGCTTGAAAATCATAGAAGAACCGCAAAAACCGATTGAGAAGCTGCAGATTTATCCGACGGCTAATGCTGGTGTTTCTCCCTTTTGGCGAGACAAGTATGAGCGAGATGCTAAAAAGTATTGGGATATATTTTACAAGCATCATGGAGACAGATTTTTCAAAGACCGCCACTACTTGGATAAGGAATGGAATAGCTATTTTTCCGTTAGTGGGAAAAGTGTCATTCTTGAGGTTGGCTGTGGAGCTGGAAACACCATCTTTCCATTGATCGCCACATATCCAGACATTTTTGTTTATGCATGTGATTTTTCACCACGAGCCGTCGAATTGGTCAAGGCTCATGATGAATACACAGAGACACGCGTTTGTGCATTTGCTTGTGACTTGACAGGGGATGGTCTTGACAAGCATATTTCTCCATCTTCAGTTGATATTGTGACCATGATATTTGTTTTATCTGCGGTATCCCCAGAGAAGATGTCCTCAGTATTGCAGAACATTAGGAAAGTTCTTAAGCCAAATGGGTGTATCCTCTTCCGTGACTATGCTGTCGGTGATCTTGCTCAGGAGAGGTTCTCTGGGAAGGATCAGAGGATCAGCGAGAACTTTTATGTGAGAGGTGATGGCACTCGTGCATTCTACTTTTCTAATGAATTCCTAGAAACTTTGTTTTCTGAACAAGGATTTGAAGTTGAGGAGCTTGATGTTTGCTGCAAACAAGTTGAGAATCGTTCACGCGAACTGGTCATGAATCGGCGCTGGGTCCAAGCTACATTTCGTCGAACAAATGGCAACAAAAACCCTTGTGATAGTTTGACTCCTGCCAAATTAGATAAATCTGAACAACAGGATAGCATTCAGTCTAAATCTGAGGAGCAGGAAAGAAAAGAGATTATTGATTACACTGACATTGACATATCTGATGGTCTGGCTATGGAAATGTTTGGAGCCTCCCCATCAAGTCATGAGGAACCCAAACATTGTTTCTGGAAAACGGGTGTTGGAATTGGGTTGTGGCTGCACAGGAATTTGCTCGATGGTAGCTGCCAGATCAGCTAACCTTGTGGTAGCAACCGATGCAGACACAAAGGCACTTACGCTATTGACAGAGAACATCACAATGAACCTCCAATCTTCTTTACTTGGAAAACTGAAAACAAGCGTACTTGAATGGGGAAACAAAGAGCATATAGAAAGCATTAAGCGTTTGGCTTGTGAGGGATTCGAAGTTATCATGGGGACAGATGTTACCTATGTAGCTGAAGCCATTATACCTTTATTTGAAACCGCAAAAGAGTTGATCTTACGGAAAATGGGAGACGACTTAGAGGTGCAAGAGAAGCCGGCGTTGATTCTATGCCATGTTTTCAGAAGGGTTGATGAACCTTCTCTTCTGTCAGCTGCATCTAAGTTTGGGTTTAAGCTTGCAGACAGATGGGCTGCAAATTCAAAGGAATCTCCTATTGGGAACATCATTGACAGTTGGTTTTCCGAAAAGGATTTGGTCGCAGAAATCCCGAGTTCTGCGTTGCATATTCTCTATTTTCAGATGGAGTAACTATGTGGTAGAGGAGCAAATGTTGATTAACTGGAGAGTTCTTTTATATTAAAAAATCCTCATTGAATCTCAAATCAATGAATGTCCTACATGTATTCTTCTATATTAGCAATGGATTTTTTGGGTATAAAACTATTACATGATGATGACTTGTTGTTACCAGCCTTCCTTATCATCCATTTCCCTCACGATTTTGACATTTTTAATGGCTTTATGAGAGTTGAATCCACATGTTAACTCGGTCCTGCAGAAACACTTTCCCTTTT
CDS Sequence
- >AT2G26200.2
ATGTCTTCTGGCTTGAAAATCATAGAAGAACCGCAAAAACCGATTGAGAAGCTGCAGATTTATCCGACGGCTAATGCTGGTGTTTCTCCCTTTTGGCGAGACAAGTATGAGCGAGATGCTAAAAAGTATTGGGATATATTTTACAAGCATCATGGAGACAGATTTTTCAAAGACCGCCACTACTTGGATAAGGAATGGAATAGCTATTTTTCCGTTAGTGGGAAAAGTGTCATTCTTGAGGTTGGCTGTGGAGCTGGAAACACCATCTTTCCATTGATCGCCACATATCCAGACATTTTTGTTTATGCATGTGATTTTTCACCACGAGCCGTCGAATTGGTCAAGGCTCATGATGAATACACAGAGACACGCGTTTGTGCATTTGCTTGTGACTTGACAGGGGATGGTCTTGACAAGCATATTTCTCCATCTTCAGTTGATATTGTGACCATGATATTTGTTTTATCTGCGGTATCCCCAGAGAAGATGTCCTCAGTATTGCAGAACATTAGGAAAGTTCTTAAGCCAAATGGGTGTATCCTCTTCCGTGACTATGCTGTCGGTGATCTTGCTCAGGAGAGGTTCTCTGGGAAGGATCAGAGGATCAGCGAGAACTTTTATGTGAGAGGTGATGGCACTCGTGCATTCTACTTTTCTAATGAATTCCTAGAAACTTTGTTTTCTGAACAAGGATTTGAAGTTGAGGAGCTTGATGTTTGCTGCAAACAAGTTGAGAATCGTTCACGCGAACTGGTCATGAATCGGCGCTGGGTCCAAGCTACATTTCGTCGAACAAATGGCAACAAAAACCCTTGTGATAGTTTGACTCCTGCCAAATTAGATAAATCTGAACAACAGGATAGCATTCAGTCTAAATCTGAGGAGCAGGAAAGAAAAGAGATTATTGATTACACTGACATTGACATATCTGATGGTCTGGCTATGGAAATGTTTGGAGCCTCCCCATCAAGTCATGAGGAACCCAAACATTGTTTCTGGAAAACGGGTGTTGGAATTGGGTTGTGGCTGCACAGGAATTTGCTCGATGGTAGCTGCCAGATCAGCTAA - >AT2G26200.1
ATGTCTTCTGGCTTGAAAATCATAGAAGAACCGCAAAAACCGATTGAGAAGCTGCAGATTTATCCGACGGCTAATGCTGGTGTTTCTCCCTTTTGGCGAGACAAGTATGAGCGAGATGCTAAAAAGTATTGGGATATATTTTACAAGCATCATGGAGACAGATTTTTCAAAGACCGCCACTACTTGGATAAGGAATGGAATAGCTATTTTTCCGTTAGTGGGAAAAGTGTCATTCTTGAGGTTGGCTGTGGAGCTGGAAACACCATCTTTCCATTGATCGCCACATATCCAGACATTTTTGTTTATGCATGTGATTTTTCACCACGAGCCGTCGAATTGGTCAAGGCTCATGATGAATACACAGAGACACGCGTTTGTGCATTTGCTTGTGACTTGACAGGGGATGGTCTTGACAAGCATATTTCTCCATCTTCAGTTGATATTGTGACCATGATATTTGTTTTATCTGCGGTATCCCCAGAGAAGATGTCCTCAGTATTGCAGAACATTAGGAAAGTTCTTAAGCCAAATGGGTGTATCCTCTTCCGTGACTATGCTGTCGGTGATCTTGCTCAGGAGAGGTTCTCTGGGAAGGATCAGAGGATCAGCGAGAACTTTTATGTGAGAGGTGATGGCACTCGTGCATTCTACTTTTCTAATGAATTCCTAGAAACTTTGTTTTCTGAACAAGGATTTGAAGTTGAGGAGCTTGATGTTTGCTGCAAACAAGTTGAGAATCGTTCACGCGAACTGGTCATGAATCGGCGCTGGGTCCAAGCTACATTTCGTCGAACAAATGGCAACAAAAACCCTTGTGATAGTTTGACTCCTGCCAAATTAGATAAATCTGAACAACAGGATAGCATTCAGTCTAAATCTGAGGAGCAGGAAAGAAAAGAGATTATTGATTACACTGACATTGACATATCTGATGGTCTGGCTATGGAAATGTTTGGAGCCTCCCCATCAAGTCATGAGGAACCCAAACATTGTTTCTGGAAAACGGGTGTTGGAATTGGGTTGTGGCTGCACAGGAATTTGCTCGATGGTAGCTGCCAGATCAGCTAA
Protein Sequence
- >AT2G26200.2
MSSGLKIIEEPQKPIEKLQIYPTANAGVSPFWRDKYERDAKKYWDIFYKHHGDRFFKDRHYLDKEWNSYFSVSGKSVILEVGCGAGNTIFPLIATYPDIFVYACDFSPRAVELVKAHDEYTETRVCAFACDLTGDGLDKHISPSSVDIVTMIFVLSAVSPEKMSSVLQNIRKVLKPNGCILFRDYAVGDLAQERFSGKDQRISENFYVRGDGTRAFYFSNEFLETLFSEQGFEVEELDVCCKQVENRSRELVMNRRWVQATFRRTNGNKNPCDSLTPAKLDKSEQQDSIQSKSEEQERKEIIDYTDIDISDGLAMEMFGASPSSHEEPKHCFWKTGVGIGLWLHRNLLDGSCQIS - >AT2G26200.1
MSSGLKIIEEPQKPIEKLQIYPTANAGVSPFWRDKYERDAKKYWDIFYKHHGDRFFKDRHYLDKEWNSYFSVSGKSVILEVGCGAGNTIFPLIATYPDIFVYACDFSPRAVELVKAHDEYTETRVCAFACDLTGDGLDKHISPSSVDIVTMIFVLSAVSPEKMSSVLQNIRKVLKPNGCILFRDYAVGDLAQERFSGKDQRISENFYVRGDGTRAFYFSNEFLETLFSEQGFEVEELDVCCKQVENRSRELVMNRRWVQATFRRTNGNKNPCDSLTPAKLDKSEQQDSIQSKSEEQERKEIIDYTDIDISDGLAMEMFGASPSSHEEPKHCFWKTGVGIGLWLHRNLLDGSCQIS