Information report for AT2G26180
Gene Details
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Functional Descriptions
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025195 — pollen tube cell — célula del tubo polínico (Spanish, exact), 花粉管細胞 (Japanese, exact)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- GO:0005874 — colocalizes with — microtubule
- GO:0016607 — colocalizes with — nuclear speck
- GO:0009574 — located in — preprophase band
- GO:0009524 — located in — phragmoplast
- GO:0007105 — enables — cytokinesis, division site positioning
- GO:0005634 — located in — nucleus
Functional Keywords
Literature and News
- Cell cycle-regulated gene expression in Arabidopsis. DOI: 10.1074/jbc.M207570200 ; PMID: 12169696
- Arabidopsis IQD1, a novel calmodulin-binding nuclear protein, stimulates glucosinolate accumulation and plant defense. DOI: 10.1111/j.1365-313X.2005.02435.x ; PMID: 15960618
- Transcriptional profile of the Arabidopsis root quiescent center. DOI: 10.1105/tpc.105.031724 ; PMID: 15937229
- Genome-wide comparative analysis of the IQD gene families in Arabidopsis thaliana and Oryza sativa. DOI: 10.1186/1471-2148-5-72 ; PMID: 16368012
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Functional compensation of primary and secondary metabolites by duplicate genes in Arabidopsis thaliana. DOI: 10.1093/molbev/msq204 ; PMID: 20736450
- The IQD Family of Calmodulin-Binding Proteins Links Calcium Signaling to Microtubules, Membrane Subdomains, and the Nucleus. DOI: 10.1104/pp.16.01743 ; PMID: 28115582
- Functions of IQD proteins as hubs in cellular calcium and auxin signaling: A toolbox for shape formation and tissue-specification in plants? DOI: 10.1080/15592324.2017.1331198 ; PMID: 28534650
- Cell wall contributes to the stability of plasma membrane nanodomain organization of Arabidopsis thaliana FLOTILLIN2 and HYPERSENSITIVE INDUCED REACTION1 proteins. DOI: 10.1111/tpj.14566 ; PMID: 31610051
- Data-mining bioinformatics: suggesting Arabidopsis thaliana L-type lectin receptor kinase IX.2 (LecRK-IX.2) modulate metabolites and abiotic stress responses. DOI: 10.1080/15592324.2020.1818031 ; PMID: 32924779
- IQ67 DOMAIN proteins facilitate preprophase band formation and division-plane orientation. DOI: 10.1038/s41477-021-00923-z ; PMID: 34031540
Gene Resources
- UniProt: A0A178VX58
- EMBL: CACSHJ010000088, LUHQ01000002
- AlphaFoldDB: A0A178VX58
- EnsemblPlants: AT2G26180.1
- Gramene: AT2G26180.1
- KEGG: ath:AT2G26180
- Orthologous matrix: RARPNYM
- ExpressionAtlas: AT2G26180
- InterPro: IPR000048
- PANTHER: PTHR32295, PTHR32295:SF95
- PROSITE: PS50096
- Gene3D: 1.20.5.190
- OrthoDB: A0A178VX58
- Conserved Domain Database: cd23767
Homologs
- Brassica oleracea Bo3g080000, Bo3g036750
- Capsicum annuum T459_03434
- Gossypium hirsutum GhIQD10
- Oryza sativa OsIQD14, GSE5, GW5L
- Solanum melongena Sme2.5_07423.1_g00002.1
Sequences
cDNA Sequence
- >AT2G26180.1
AACTTCACATTCTCCGATATTCTCTCTCTCTCTATCAATCTCTCACTCTCAAACTTTCTACATACCTGAAGAAAAAAATAATCTACGAATTCGAGCCAAAAAGATCGAAACTTTTTAATCTATGGGTGCTTCAGGGAAATGGGTCAAGTCCATTATCGGTCTCAAGAAGCTAGAGAAGGATGAAATCGAAAAGGGTAATGGGAAAAACAAGAAATGGAAGCTATGGAGGACTACTTCAGTAGATTCATGGAAGGGTTTTCGAGGAAAACATCGGTCTGATTCAGACGGTGTTGATTCTTCTACTGTTTACTCTGCTGCTGTTGCTACTGTTCTTAGAGCTCCTCCTAAAGATTTCAAAGCTGTTAGAGAAGAATGGGCTGCTATTAGAATCCAAACCGCTTTTCGTGGATTCTTGGCGAGAAGAGCGTTGAGGGCATTGAAAGGGATAGTGAGGTTACAAGCTTTAGTGAGAGGAAGACAAGTTAGGAAACAAGCAGCTGTTACATTGAGATGCATGCAAGCTTTGGTGAGAGTACAAGCTCGTGTTAGAGCTCGTCGTGTGAGGATGACTGTTGAAGGACAAGCTGTTCAAAAGCTTTTAGATGAACATAGAACCAAATCTGATCTCTTGAAAGAAGTCGAGGAAGGGTGGTGTGATAGGAAAGGTACTGTGGATGATATTAAGTCAAAGTTGCAGCAGAGACAAGAAGGTGCTTTTAAGAGGGAACGTGCTTTGGCTTATGCTCTTGCTCAAAAGCAATGGAGGTCAACTACTAGCTCAAACCTTAAGACGAATAGTTCGATTTCGTATCTTAAAAGTCAAGAGTTTGATAAGAATAGTTGGGGATGGAGTTGGTTGGAGCGTTGGATGGCTGCTAGGCCATGGGAGACTAGACTTATGGACACTGTTGATACCGCTGCCACGCCTCCTCCTCTGCCTCATAAACATTTGAAATCACCGGAAACTGCGGATGTTGTTCAAGTTAGAAGAAACAATGTGACCACTAGAGTATCTGCAAAACCTCCTCCTCATATGCTGTCTTCAAGTCCTGGTTATGAGTTTAACGAGAGCTCAGGTTCATCCTCGATTTGTACTTCAACTACGCCTGTTTCTGGAAAAACTGGACTTGTTTCAGATAACTCTAGCAGTCAAGCAAAAAAGCACAAGCCAAGTTACATGAGCTTGACTGAATCGACAAAGGCTAAGCGAAGAACTAACCGCGGTCTCAGGCAATCTATGGATGAGTTTCAGTTTATGAAGAACTCTGGAATGTTTACAGGGGAATTGAAGACTAGTCCTTCCTCAGATCCTTTTGTTAGTTTCTCCAAACCACTCGGTGTTCCTACTCGATTCGAGAAGCCGAGAGGTTAAATGTGACCTTGTTAGATTGGAGTTTCAACAGCTTGTTGTTGTCTTGTGTGTTGTGAGATATCTGTGTATGTTGTTAATTGTTCTTTTTCCTTTGGAACTACATTGGAGTTTTGAATTTAAATATAAATTTCAGTCTTGCTTTT
CDS Sequence
- >AT2G26180.1
ATGGGTGCTTCAGGGAAATGGGTCAAGTCCATTATCGGTCTCAAGAAGCTAGAGAAGGATGAAATCGAAAAGGGTAATGGGAAAAACAAGAAATGGAAGCTATGGAGGACTACTTCAGTAGATTCATGGAAGGGTTTTCGAGGAAAACATCGGTCTGATTCAGACGGTGTTGATTCTTCTACTGTTTACTCTGCTGCTGTTGCTACTGTTCTTAGAGCTCCTCCTAAAGATTTCAAAGCTGTTAGAGAAGAATGGGCTGCTATTAGAATCCAAACCGCTTTTCGTGGATTCTTGGCGAGAAGAGCGTTGAGGGCATTGAAAGGGATAGTGAGGTTACAAGCTTTAGTGAGAGGAAGACAAGTTAGGAAACAAGCAGCTGTTACATTGAGATGCATGCAAGCTTTGGTGAGAGTACAAGCTCGTGTTAGAGCTCGTCGTGTGAGGATGACTGTTGAAGGACAAGCTGTTCAAAAGCTTTTAGATGAACATAGAACCAAATCTGATCTCTTGAAAGAAGTCGAGGAAGGGTGGTGTGATAGGAAAGGTACTGTGGATGATATTAAGTCAAAGTTGCAGCAGAGACAAGAAGGTGCTTTTAAGAGGGAACGTGCTTTGGCTTATGCTCTTGCTCAAAAGCAATGGAGGTCAACTACTAGCTCAAACCTTAAGACGAATAGTTCGATTTCGTATCTTAAAAGTCAAGAGTTTGATAAGAATAGTTGGGGATGGAGTTGGTTGGAGCGTTGGATGGCTGCTAGGCCATGGGAGACTAGACTTATGGACACTGTTGATACCGCTGCCACGCCTCCTCCTCTGCCTCATAAACATTTGAAATCACCGGAAACTGCGGATGTTGTTCAAGTTAGAAGAAACAATGTGACCACTAGAGTATCTGCAAAACCTCCTCCTCATATGCTGTCTTCAAGTCCTGGTTATGAGTTTAACGAGAGCTCAGGTTCATCCTCGATTTGTACTTCAACTACGCCTGTTTCTGGAAAAACTGGACTTGTTTCAGATAACTCTAGCAGTCAAGCAAAAAAGCACAAGCCAAGTTACATGAGCTTGACTGAATCGACAAAGGCTAAGCGAAGAACTAACCGCGGTCTCAGGCAATCTATGGATGAGTTTCAGTTTATGAAGAACTCTGGAATGTTTACAGGGGAATTGAAGACTAGTCCTTCCTCAGATCCTTTTGTTAGTTTCTCCAAACCACTCGGTGTTCCTACTCGATTCGAGAAGCCGAGAGGTTAA
Protein Sequence
- >AT2G26180.1
MGASGKWVKSIIGLKKLEKDEIEKGNGKNKKWKLWRTTSVDSWKGFRGKHRSDSDGVDSSTVYSAAVATVLRAPPKDFKAVREEWAAIRIQTAFRGFLARRALRALKGIVRLQALVRGRQVRKQAAVTLRCMQALVRVQARVRARRVRMTVEGQAVQKLLDEHRTKSDLLKEVEEGWCDRKGTVDDIKSKLQQRQEGAFKRERALAYALAQKQWRSTTSSNLKTNSSISYLKSQEFDKNSWGWSWLERWMAARPWETRLMDTVDTAATPPPLPHKHLKSPETADVVQVRRNNVTTRVSAKPPPHMLSSSPGYEFNESSGSSSICTSTTPVSGKTGLVSDNSSSQAKKHKPSYMSLTESTKAKRRTNRGLRQSMDEFQFMKNSGMFTGELKTSPSSDPFVSFSKPLGVPTRFEKPRG