Information report for AT2G26060
Gene Details
|
|
Functional Descriptions
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- GO:0016226 — acts upstream of or within — iron-sulfur cluster assembly
- GO:0009793 — acts upstream of or within — embryo development ending in seed dormancy
- GO:0097361 — part of — CIA complex
- GO:0016226 — involved in — iron-sulfur cluster assembly
Functional Keywords
Literature and News
- Identification of genes required for embryo development in Arabidopsis. DOI: 10.1104/pp.104.045179 ; PMID: 15266054
- Genome analysis of Chlamydomonas reinhardtii reveals the existence of multiple, compartmentalized iron-sulfur protein assembly machineries of different evolutionary origins. DOI: 10.1534/genetics.107.086033 ; PMID: 18493040
- The DUF59 family gene AE7 acts in the cytosolic iron-sulfur cluster assembly pathway to maintain nuclear genome integrity in Arabidopsis. DOI: 10.1105/tpc.112.102608 ; PMID: 23104832
- Glutaredoxin GRXS17 Associates with the Cytosolic Iron-Sulfur Cluster Assembly Pathway. DOI: 10.1104/pp.16.00261 ; PMID: 27503603
- Genome-wide identification of EMBRYO-DEFECTIVE (EMB) genes required for growth and development in Arabidopsis. DOI: 10.1111/nph.16071 ; PMID: 31334862
- Analysis of protein complexes in Arabidopsis leaves using size exclusion chromatography and label-free protein correlation profiling. DOI: 10.1016/j.jprot.2017.06.004 ; PMID: 28627464
Gene Resources
- UniProt: A0A178VR17
- EMBL: CACRSJ010000105, LR881467, LUHQ01000002
- AlphaFoldDB: A0A178VR17
- EnsemblPlants: AT2G26060.1
- Gramene: AT2G26060.1
- KEGG: ath:AT2G26060
- Orthologous matrix: IREIRWS
- ExpressionAtlas: AT2G26060
- InterPro: IPR001680, IPR015943, IPR019775
- PANTHER: PTHR19920, PTHR19920:SF0
- SUPFAM: SSF50978
- PROSITE: PS00678, PS50082, PS50294
- Gene3D: 2.130.10.10
- SWISS-MODEL: A0A178VR17
- Conserved Domain Database: cd00200
Homologs
- Brachypodium distachyon BRADI_1g10180v3
- Brassica napus BnaA06G0270700ZS, BnaC03G0562300ZS
- Brassica oleracea Bo3g109400
- Brassica rapa Bra019610
- Hordeum vulgare HORVU4Hr1G009500
- Saccharum spontaneum Sspon.01G0027620-1A, Sspon.01G0027620-2B
- Setaria italica SETIT_039077mg
- Setaria viridis SEVIR_9G108700v2
- Triticum aestivum TaHOS15-B, TaHOS15-A, TaHOS15-D
- Zea mays GRMZM2G088162, GRMZM2G013563
Sequences
cDNA Sequence
- >AT2G26060.1
CAAACCCAGACCCAAACCCATGCCCATACACAAATCACGAATGCCTAGGCTTACTTGTGACCGAAACCGAATTGAATCATATATAGTTTCAGGTCACCTGTTGCACAATCTCTGCTCAGCCCTAAAAGCTTACTCCTTTCAACTTTCTGGAGGCCTTCTCGTAGCCTAGCGTCATAGATGGATTTGATGGAGAAGAACTTGGAGTTAGTGGAGATTCAGAAACTAGAAGGCCACACCGATCGTGTTTGGAGCGTAGCTTGGAACCCCGTTTCTTCTCACGCCGACGGTGTTTCACCGATTCTTGCTTCTTGCAGTGGCGATAACACTGTTCGAATCTGGGAACAAAGCTCTCTCTCTCGCTCCTGGACTTGCAAGACAGTTTTGGAAGAGACGCATACAAGAACTGTGAGGTCGTGCGCTTGGTCACCCTCAGGACAGTTATTGGCCACTGCAAGTTTTGATGGTACCACTGGCATTTGGAAGAATTACGGTTCTGAGTTTGAGTGTATTTCCACTTTGGAGGGACATGAAAACGAAGTCAAAAGTGTATCATGGAATGCATCTGGTTCATGCCTTGCAACATGTAGTAGAGATAAGTCTGTTTGGATTTGGGAAGTGCTTGAAGGGAATGAATATGACTGTGCTGCGGTATTAACTGGGCATACACAAGATGTGAAGATGGTTCAGTGGCATCCCACCATGGATGTTTTATTTTCTTGCAGTTATGATAACACCATCAAGGTTTGGTGGTCTGAAGATGATGATGGTGAGTATCAATGTGTCCAAACCTTAGGTGAATCTAACAACGGTCACTCTTCAACGGTATGGTCCATCTCATTTAACGCTGCAGGGGACAAGATGGTCACTTGTAGTGATGATCTAACCTTGAAGATATGGGGGACAGATATTGCCAAGATGCAGTCTGGTGAAGAATATGCACCTTGGATTCATCTTTGTACTCTCTCTGGCTATCATGACCGTACCATATACTCAGCTCACTGGTCAAGGGACGACATTATTGCCAGTGGAGCAGGCGATAATGCTATACGGTTGTTTGTGGACAGCAAACATGACTCTGTTGATGGACCTTCATATAATCTTTTGCTGAAGAAGAATAAAGCACATGAAAATGATGTAAACTCTGTCCAATGGTCACCCGGTGAGGGGAACCGGTTGCTTGCGTCGGCTAGTGATGATGGGATGGTCAAGATTTGGCAGCTTGCAACTAAACCGTGACTGCTGTTGGTTTGGATAGGTTCTGAAACTCCTGTGTTGTTTTACTTTTTCTGAGGTCTATCTGTAAACAACATAACATTTTAGGTAGAAGAGAACTCTATACTATTTTGTCATACAAGATTAGCTCCATGATGTTTCATACGATTTCTGTTTTACTTTTACTACGATCACTTAAGTTTTAACACTGTTGGTACAACTTTGTGGAATTTAATAAACAACTTTTTGACGAAACAAAAA - >AT2G26060.2
CAAACCCAGACCCAAACCCATGCCCATACACAAATCACGAATGCCTAGGCTTACTTGTGACCGAAACCGAATTGAATCATATATAGTTTCAGGTCACCTGTTGCACAATCTCTGCTCAGCCCTAAAAGCTTACTCCTTTCAACTTTCTGGAGGCCTTCTCGTAGCCTAGCGTCATAGATGGATTTGATGGAGAAGAACTTGGAGTTAGTGGAGATTCAGAAACTAGAAGGCCACACCGATCGTGTTTGGAGCGTAGCTTGGAACCCCGTTTCTTCTCACGCCGACGGTGTTTCACCGATTCTTGCTTCTTGCAGTGGCGATAACACTGTTCGAATCTGGGAACAAAGCTCTCTCTCTCGCTCCTGGACTTGCAAGACAGTTTTGGAAGAGACGCATACAAGAACTGTGAGGTCGTGCGCTTGGTCACCCTCAGGACAGTTATTGGCCACTGCAAGTTTTGATGGTACCACTGGCATTTGGAAGAATTACGGTTCTGAGTTTGAGTGTATTTCCACTTTGGAGGGACATGAAAACGAAGTCAAAAGTGTATCATGGAATGCATCTGGTTCATGCCTTGCAACATGTAGTAGAGATAAGTCTGTTTGGATTTGGGAAGTGCTTGAAGGGAATGAATATGACTGTGCTGCGGTATTAACTGGGCATACACAAGATGTGAAGATGGTTCAGTGGCATCCCACCATGGATGTTTTATTTTCTTGCAGTTATGATAACACCATCAAGGTTTGGTGGTCTGAAGATGATGATGGTGAGTATCAATGTGTCCAAACCTTAGGTGAATCTAACAACGGTCACTCTTCAACGGTATGGTCCATCTCATTTAACGCTGCAGGGGACAAGATGGTCACTTGTAGTGATGATCTAACCTTGAAGATATGGGGGACAGATATTGCCAAGATGCAGTCTGGTGAAGAATATGCACCTTGGATTCATCTTTGTACTCTCTCTGGCTATCATGACCGTACCATATACTCAGCTCACTGGTCAAGGGACGACATTATTGCCAGTGGAGCAGGCGATAATGCTATACGGTTGTTTGTGGACAGCAAACATGACTCTGTTGATGGACCTTCATATAATCTTTTGCTGAAGAAGAATAAAGCACATGAAAATGATGTAAACTCTGTCCAATGGTCACCCGGTGAGGGGAACCGGTTGCTTGCGTCGGCTAGTGATGATGGGATGGTCAAGATTTGGCAGCTTGCAACTAAACCGTGACTGCTGTTGGTTTGGATAGGTTCTGAAACTCCTGTGTTGTTTTACTTTTTCTGAGGTCTATCTGTAAACAACATAACATTTTAGGTAGAAGAGAACTCTATACTATTTTGTCATACAAGATTAGCTCCATGATGTTTCATACGATTTCTGTTTTACTTTTACTACGATCACTTAAGTTTTAACACTGTTGGTACAACTTTGTGGAATTTAATAAACAACTTTTTGACGAAACAAAAA
CDS Sequence
- >AT2G26060.1
ATGGATTTGATGGAGAAGAACTTGGAGTTAGTGGAGATTCAGAAACTAGAAGGCCACACCGATCGTGTTTGGAGCGTAGCTTGGAACCCCGTTTCTTCTCACGCCGACGGTGTTTCACCGATTCTTGCTTCTTGCAGTGGCGATAACACTGTTCGAATCTGGGAACAAAGCTCTCTCTCTCGCTCCTGGACTTGCAAGACAGTTTTGGAAGAGACGCATACAAGAACTGTGAGGTCGTGCGCTTGGTCACCCTCAGGACAGTTATTGGCCACTGCAAGTTTTGATGGTACCACTGGCATTTGGAAGAATTACGGTTCTGAGTTTGAGTGTATTTCCACTTTGGAGGGACATGAAAACGAAGTCAAAAGTGTATCATGGAATGCATCTGGTTCATGCCTTGCAACATGTAGTAGAGATAAGTCTGTTTGGATTTGGGAAGTGCTTGAAGGGAATGAATATGACTGTGCTGCGGTATTAACTGGGCATACACAAGATGTGAAGATGGTTCAGTGGCATCCCACCATGGATGTTTTATTTTCTTGCAGTTATGATAACACCATCAAGGTTTGGTGGTCTGAAGATGATGATGGTGAGTATCAATGTGTCCAAACCTTAGGTGAATCTAACAACGGTCACTCTTCAACGGTATGGTCCATCTCATTTAACGCTGCAGGGGACAAGATGGTCACTTGTAGTGATGATCTAACCTTGAAGATATGGGGGACAGATATTGCCAAGATGCAGTCTGGTGAAGAATATGCACCTTGGATTCATCTTTGTACTCTCTCTGGCTATCATGACCGTACCATATACTCAGCTCACTGGTCAAGGGACGACATTATTGCCAGTGGAGCAGGCGATAATGCTATACGGTTGTTTGTGGACAGCAAACATGACTCTGTTGATGGACCTTCATATAATCTTTTGCTGAAGAAGAATAAAGCACATGAAAATGATGTAAACTCTGTCCAATGGTCACCCGGTGAGGGGAACCGGTTGCTTGCGTCGGCTAGTGATGATGGGATGGTCAAGATTTGGCAGCTTGCAACTAAACCGTGA - >AT2G26060.2
ATGGATTTGATGGAGAAGAACTTGGAGTTAGTGGAGATTCAGAAACTAGAAGGCCACACCGATCGTGTTTGGAGCGTAGCTTGGAACCCCGTTTCTTCTCACGCCGACGGTGTTTCACCGATTCTTGCTTCTTGCAGTGGCGATAACACTGTTCGAATCTGGGAACAAAGCTCTCTCTCTCGCTCCTGGACTTGCAAGACAGTTTTGGAAGAGACGCATACAAGAACTGTGAGGTCGTGCGCTTGGTCACCCTCAGGACAGTTATTGGCCACTGCAAGTTTTGATGGTACCACTGGCATTTGGAAGAATTACGGTTCTGAGTTTGAGTGTATTTCCACTTTGGAGGGACATGAAAACGAAGTCAAAAGTGTATCATGGAATGCATCTGGTTCATGCCTTGCAACATGTAGTAGAGATAAGTCTGTTTGGATTTGGGAAGTGCTTGAAGGGAATGAATATGACTGTGCTGCGGTATTAACTGGGCATACACAAGATGTGAAGATGGTTCAGTGGCATCCCACCATGGATGTTTTATTTTCTTGCAGTTATGATAACACCATCAAGGTTTGGTGGTCTGAAGATGATGATGGTGAGTATCAATGTGTCCAAACCTTAGGTGAATCTAACAACGGTCACTCTTCAACGGTATGGTCCATCTCATTTAACGCTGCAGGGGACAAGATGGTCACTTGTAGTGATGATCTAACCTTGAAGATATGGGGGACAGATATTGCCAAGATGCAGTCTGGTGAAGAATATGCACCTTGGATTCATCTTTGTACTCTCTCTGGCTATCATGACCGTACCATATACTCAGCTCACTGGTCAAGGGACGACATTATTGCCAGTGGAGCAGGCGATAATGCTATACGGTTGTTTGTGGACAGCAAACATGACTCTGTTGATGGACCTTCATATAATCTTTTGCTGAAGAAGAATAAAGCACATGAAAATGATGTAAACTCTGTCCAATGGTCACCCGGTGAGGGGAACCGGTTGCTTGCGTCGGCTAGTGATGATGGGATGGTCAAGATTTGGCAGCTTGCAACTAAACCGTGA
Protein Sequence
- >AT2G26060.1
MDLMEKNLELVEIQKLEGHTDRVWSVAWNPVSSHADGVSPILASCSGDNTVRIWEQSSLSRSWTCKTVLEETHTRTVRSCAWSPSGQLLATASFDGTTGIWKNYGSEFECISTLEGHENEVKSVSWNASGSCLATCSRDKSVWIWEVLEGNEYDCAAVLTGHTQDVKMVQWHPTMDVLFSCSYDNTIKVWWSEDDDGEYQCVQTLGESNNGHSSTVWSISFNAAGDKMVTCSDDLTLKIWGTDIAKMQSGEEYAPWIHLCTLSGYHDRTIYSAHWSRDDIIASGAGDNAIRLFVDSKHDSVDGPSYNLLLKKNKAHENDVNSVQWSPGEGNRLLASASDDGMVKIWQLATKP - >AT2G26060.2
MDLMEKNLELVEIQKLEGHTDRVWSVAWNPVSSHADGVSPILASCSGDNTVRIWEQSSLSRSWTCKTVLEETHTRTVRSCAWSPSGQLLATASFDGTTGIWKNYGSEFECISTLEGHENEVKSVSWNASGSCLATCSRDKSVWIWEVLEGNEYDCAAVLTGHTQDVKMVQWHPTMDVLFSCSYDNTIKVWWSEDDDGEYQCVQTLGESNNGHSSTVWSISFNAAGDKMVTCSDDLTLKIWGTDIAKMQSGEEYAPWIHLCTLSGYHDRTIYSAHWSRDDIIASGAGDNAIRLFVDSKHDSVDGPSYNLLLKKNKAHENDVNSVQWSPGEGNRLLASASDDGMVKIWQLATKP